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The map label for this gene is trbB [H]

Identifier: 38638020

GI number: 38638020

Start: 373128

End: 374177

Strand: Direct

Name: trbB [H]

Synonym: PHG359

Alternate gene names: 38638020

Gene position: 373128-374177 (Clockwise)

Preceding gene: 38638003

Following gene: 38638021

Centisome position: 82.52

GC content: 62.29

Gene sequence:

>1050_bases
ATGGAATCAGCGTCCACCAACCACCCTCTTCTGCAGCTCACGCAGCTTGCCGACAGCGCCGTGTCGATGTTCTTCGAATC
GCTGGCGCCGTTGCACGATGTCATTCATGCGGATGACGTGGCGGAGGTCATGATCAATCGCCACAACAGCATCTGGGTCG
AGCGACGCGGCATCATGACCCGACTCGAGATCGAGATCGATCCGTTCAAGATCGAGGGGGCGATCCGTTCCTTGGCGTCG
TCGGTAGAAAAGTCCGCGGTGCGCGGCACGGCCCAGGGCATCATCAACGCCGGTCAAAAGGGCCTGCGCATCGCCGCCGT
GATGCAGCCAACGTCGATCGACGGCCACGCTCTGAGCATCCGGCGGCATCGCGAGAAGAACATGCGCCTGTCGGACTATG
TGAAGGCCGGCGCGTTCTCATCCCGGCATGCGCGCACGGAAACCGAGACGCCCATCTTCTGCGGCCCTGTCGAGGACGAC
GCACTCGCCCAGGCGCTCGGCGAGCTAGTCCGCCTGCGCAAGAACATCCTGGTGGCAGGCGGTACGTCTTCAGGCAAGAC
CACGCTACTCAATGCCATGGTCGGCGAGATTCCACCGGAGGAGCGGGTCATCACCATCGAGGACACGACGGAGCTCAAGC
CCAGCGTGCCGAACGTCGTGCGGCTCCTTTCCAACGCCGACAAGGGCGTGACCACGCAGCATCTCGTCGCGCTCTCTCTG
CGCTTCCGGCCAGACCGGATTCTCGTGGGCGAAGTCCGGGGCGGCGAAGCGTACGACATGCTCCAGGCCTTTAACACCGG
CCACGACGGCGGCATGGGATCGCTGCATGCGCCCAGTCCCCGCATGGCCTTGTCCCGTCTCGAAAGCATGGCGCTGCTCG
GCATCCCGCCCGGTTCCGGCTGGAAAGTCGAAGACATGCGTCGCCTCATTGCCGACTGCATTCACTACGTTGTGCACATG
AAGCGTTCGGGAGACATGCGCGTGCTCTCCGAGATCATTGAGATCAAGGGCTTTCGCAATAACGACTACGAATACCAACG
CGTTTTCTAA

Upstream 100 bases:

>100_bases
ACTTGAGCGGACCGGCGCCGCACGACTTCGTCAAAAGCTCTTGAAAATCGCCTAGCTTTCAGTCGACTACAGGACCGTTT
GCCCGCCAACAATAGCGGGC

Downstream 100 bases:

>100_bases
ACCTCAGGAGTCTTTTCGCATGACCTCCCCGTTCTCACAGCGCGCCCGCGCAACAGCTCGCAAGTACGCCCCGTCCGCCT
TGCTGCTCGTCGGCATGATG

Product: putative chaperonin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MESASTNHPLLQLTQLADSAVSMFFESLAPLHDVIHADDVAEVMINRHNSIWVERRGIMTRLEIEIDPFKIEGAIRSLAS
SVEKSAVRGTAQGIINAGQKGLRIAAVMQPTSIDGHALSIRRHREKNMRLSDYVKAGAFSSRHARTETETPIFCGPVEDD
ALAQALGELVRLRKNILVAGGTSSGKTTLLNAMVGEIPPEERVITIEDTTELKPSVPNVVRLLSNADKGVTTQHLVALSL
RFRPDRILVGEVRGGEAYDMLQAFNTGHDGGMGSLHAPSPRMALSRLESMALLGIPPGSGWKVEDMRRLIADCIHYVVHM
KRSGDMRVLSEIIEIKGFRNNDYEYQRVF

Sequences:

>Translated_349_residues
MESASTNHPLLQLTQLADSAVSMFFESLAPLHDVIHADDVAEVMINRHNSIWVERRGIMTRLEIEIDPFKIEGAIRSLAS
SVEKSAVRGTAQGIINAGQKGLRIAAVMQPTSIDGHALSIRRHREKNMRLSDYVKAGAFSSRHARTETETPIFCGPVEDD
ALAQALGELVRLRKNILVAGGTSSGKTTLLNAMVGEIPPEERVITIEDTTELKPSVPNVVRLLSNADKGVTTQHLVALSL
RFRPDRILVGEVRGGEAYDMLQAFNTGHDGGMGSLHAPSPRMALSRLESMALLGIPPGSGWKVEDMRRLIADCIHYVVHM
KRSGDMRVLSEIIEIKGFRNNDYEYQRVF
>Mature_349_residues
MESASTNHPLLQLTQLADSAVSMFFESLAPLHDVIHADDVAEVMINRHNSIWVERRGIMTRLEIEIDPFKIEGAIRSLAS
SVEKSAVRGTAQGIINAGQKGLRIAAVMQPTSIDGHALSIRRHREKNMRLSDYVKAGAFSSRHARTETETPIFCGPVEDD
ALAQALGELVRLRKNILVAGGTSSGKTTLLNAMVGEIPPEERVITIEDTTELKPSVPNVVRLLSNADKGVTTQHLVALSL
RFRPDRILVGEVRGGEAYDMLQAFNTGHDGGMGSLHAPSPRMALSRLESMALLGIPPGSGWKVEDMRRLIADCIHYVVHM
KRSGDMRVLSEIIEIKGFRNNDYEYQRVF

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 38450; Mature: 38450

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESASTNHPLLQLTQLADSAVSMFFESLAPLHDVIHADDVAEVMINRHNSIWVERRGIMT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
RLEIEIDPFKIEGAIRSLASSVEKSAVRGTAQGIINAGQKGLRIAAVMQPTSIDGHALSI
EEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHH
RRHREKNMRLSDYVKAGAFSSRHARTETETPIFCGPVEDDALAQALGELVRLRKNILVAG
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCEEEEC
GTSSGKTTLLNAMVGEIPPEERVITIEDTTELKPSVPNVVRLLSNADKGVTTQHLVALSL
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEHE
RFRPDRILVGEVRGGEAYDMLQAFNTGHDGGMGSLHAPSPRMALSRLESMALLGIPPGSG
EECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCC
WKVEDMRRLIADCIHYVVHMKRSGDMRVLSEIIEIKGFRNNDYEYQRVF
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure
MESASTNHPLLQLTQLADSAVSMFFESLAPLHDVIHADDVAEVMINRHNSIWVERRGIMT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEE
RLEIEIDPFKIEGAIRSLASSVEKSAVRGTAQGIINAGQKGLRIAAVMQPTSIDGHALSI
EEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHH
RRHREKNMRLSDYVKAGAFSSRHARTETETPIFCGPVEDDALAQALGELVRLRKNILVAG
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCEEEEC
GTSSGKTTLLNAMVGEIPPEERVITIEDTTELKPSVPNVVRLLSNADKGVTTQHLVALSL
CCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEHE
RFRPDRILVGEVRGGEAYDMLQAFNTGHDGGMGSLHAPSPRMALSRLESMALLGIPPGSG
EECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCC
WKVEDMRRLIADCIHYVVHMKRSGDMRVLSEIIEIKGFRNNDYEYQRVF
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]