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The map label for this gene is trbC

Identifier: 38638021

GI number: 38638021

Start: 374197

End: 374544

Strand: Direct

Name: trbC

Synonym: PHG360

Alternate gene names: NA

Gene position: 374197-374544 (Clockwise)

Preceding gene: 38638020

Following gene: 38638022

Centisome position: 82.76

GC content: 62.64

Gene sequence:

>348_bases
ATGACCTCCCCGTTCTCACAGCGCGCCCGCGCAACAGCTCGCAAGTACGCCCCGTCCGCCTTGCTGCTCGTCGGCATGAT
GGCAGTCGCCACCTCCGCCGTCGCCGCGGACGATTCGTTCCTCGGCAATCTTGGCAACTTCATCTGCGGCATCGCCACCT
TCATCAACACGAAGTATCTGTTCGTCATCGGCCTGATCGTCATTGTGCTGGGCGCCTATGCCTATGCCAATGCCGAATCG
AGCCTGTCCAAGTTCATCTCGGGGGCTTGCGTTGGCGTCGGCCTGGCCGCAGCGGCGCCGTCGATCCTGAAGACGCTGAA
CATCGTCGCCGCCTGCACCGGCTTCTAA

Upstream 100 bases:

>100_bases
GGAGACATGCGCGTGCTCTCCGAGATCATTGAGATCAAGGGCTTTCGCAATAACGACTACGAATACCAACGCGTTTTCTA
AACCTCAGGAGTCTTTTCGC

Downstream 100 bases:

>100_bases
GAGATGAGAAAGCACCATGTGAGCATCGGCCTGTCGATGCCTCGCCTGATCGCAGGCGCGGTACGTGGCCTCGCCATCGC
CAACGGCACCATCGTCGCGC

Product: putative prepilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTSPFSQRARATARKYAPSALLLVGMMAVATSAVAADDSFLGNLGNFICGIATFINTKYLFVIGLIVIVLGAYAYANAES
SLSKFISGACVGVGLAAAAPSILKTLNIVAACTGF

Sequences:

>Translated_115_residues
MTSPFSQRARATARKYAPSALLLVGMMAVATSAVAADDSFLGNLGNFICGIATFINTKYLFVIGLIVIVLGAYAYANAES
SLSKFISGACVGVGLAAAAPSILKTLNIVAACTGF
>Mature_114_residues
TSPFSQRARATARKYAPSALLLVGMMAVATSAVAADDSFLGNLGNFICGIATFINTKYLFVIGLIVIVLGAYAYANAESS
LSKFISGACVGVGLAAAAPSILKTLNIVAACTGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11716; Mature: 11585

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPFSQRARATARKYAPSALLLVGMMAVATSAVAADDSFLGNLGNFICGIATFINTKYL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FVIGLIVIVLGAYAYANAESSLSKFISGACVGVGLAAAAPSILKTLNIVAACTGF
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSPFSQRARATARKYAPSALLLVGMMAVATSAVAADDSFLGNLGNFICGIATFINTKYL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FVIGLIVIVLGAYAYANAESSLSKFISGACVGVGLAAAAPSILKTLNIVAACTGF
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA