Click here to switch to the map view.

The map label for this gene is 38637988

Identifier: 38637988

GI number: 38637988

Start: 341734

End: 342678

Strand: Direct

Name: 38637988

Synonym: PHG327

Alternate gene names: NA

Gene position: 341734-342678 (Clockwise)

Preceding gene: 38637987

Following gene: 38637991

Centisome position: 75.58

GC content: 67.09

Gene sequence:

>945_bases
TTGCCCAGCGGCGGGCAAGCTGAAGGCGTATCCACTTCAACGGAATTCCCCTCAGATGACCCGCCAGCTTCTCGCAGCAG
TCGTTCTCTCCCTTGCATCCCTCACGGCAAGCGCACGGGACACGGGACAGGCCTGTGCTCACGTCCTGCCTACGGGCCAA
CCCACGACTCAACCAGCGGGCCGCACGCAGTTGCTGTGCTACCGCGCCTACGCCGTTCTCTATTCGAGCCAGACACGCAC
CGCGCTGTGGTCTGCCGAGCGTCTCACGCGGGAGGCCGTCGACGCCGCGCGCAAGCTGCCACGCGACAGCGACTTCTACG
AAGAGGAGCGACTGCCCGAAGCCGACCGCGCCAGGCTGGCCGACTACCGACGCGGATCGGGCATGGATCGAGGGCCCCGA
GCGGCGACTTCCCGGACAAGGCGTCCCAAGCCGAGAGCTTCAGCCTCGCGAACGTTATCCCCCAACACAGCGTGTCGAAC
CGCCGCACCTGGAGTCACATCGAGACGTCCACACGCAGGCTGGCCCGCCAGCACGGTGCGATCCAGGTGGTGACCGGCCC
CGCATTCGTCGGCACCCCGAGGACGCTGGGCCACGTGCACATCCCCGACTTCATTTGGAAAGCGATCCACGTGCCAGGCA
TTGGCGCCGCCGTCTACCTTGTCCGCAACGACGCGACGCCCGCGTACAGTGTCATTAGCGTCGCAGAATTGCGGCACTTT
GCAGGGATCGACCCGTTTCCGACACTCCCCAAGGCCATGAACGCCACGGCGATGGACCTGCCCCTTCCCACCCCGCACCC
TGGTGAGAAGGCGGCGCGCCGCGTCGCGTTCGCATGGCTTGCATCGGGCGAAGCCGCCGCGGCCTCGCGCGCGACGGAGC
CTCTCCACCAAGCCATCCGGGACGCAAGTGCAATCCTGTCGCTGGCCCTCGCCCACGCACGTTAG

Upstream 100 bases:

>100_bases
CGGAGGAGGGTCTGGCGGATCAGGATTGGCCGCTCCTCGACATGGAAGAATTCGTCGGTAAGGCCATCGACAGCCTGCCG
GATCATTGGCAGCCTTGACT

Downstream 100 bases:

>100_bases
CCAGCCATCTCGACCGCGGAAGGAACATGTTCCTTCAGAAAAAGCGAAAGGCACGCCAAAAGACGTGCCTTTTGCATGCA
AACACTGCTCCGGATGCTGA

Product: putative endonuclease

Products: NA

Alternate protein names: Endonuclease; DNA/RNA Endonuclease G; DNA/RNA Non-Specific Endonuclease G Protein; DNA/RNA Non-Specific Endonuclease Family; DNA/Rna Non-Specific Endonuclease; DNA/RNA Non-Specific Endonuclease Protein; Nuclease

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPSGGQAEGVSTSTEFPSDDPPASRSSRSLPCIPHGKRTGHGTGLCSRPAYGPTHDSTSGPHAVAVLPRLRRSLFEPDTH
RAVVCRASHAGGRRRRAQAATRQRLLRRGATARSRPRQAGRLPTRIGHGSRAPSGDFPDKASQAESFSLANVIPQHSVSN
RRTWSHIETSTRRLARQHGAIQVVTGPAFVGTPRTLGHVHIPDFIWKAIHVPGIGAAVYLVRNDATPAYSVISVAELRHF
AGIDPFPTLPKAMNATAMDLPLPTPHPGEKAARRVAFAWLASGEAAAASRATEPLHQAIRDASAILSLALAHAR

Sequences:

>Translated_314_residues
MPSGGQAEGVSTSTEFPSDDPPASRSSRSLPCIPHGKRTGHGTGLCSRPAYGPTHDSTSGPHAVAVLPRLRRSLFEPDTH
RAVVCRASHAGGRRRRAQAATRQRLLRRGATARSRPRQAGRLPTRIGHGSRAPSGDFPDKASQAESFSLANVIPQHSVSN
RRTWSHIETSTRRLARQHGAIQVVTGPAFVGTPRTLGHVHIPDFIWKAIHVPGIGAAVYLVRNDATPAYSVISVAELRHF
AGIDPFPTLPKAMNATAMDLPLPTPHPGEKAARRVAFAWLASGEAAAASRATEPLHQAIRDASAILSLALAHAR
>Mature_313_residues
PSGGQAEGVSTSTEFPSDDPPASRSSRSLPCIPHGKRTGHGTGLCSRPAYGPTHDSTSGPHAVAVLPRLRRSLFEPDTHR
AVVCRASHAGGRRRRAQAATRQRLLRRGATARSRPRQAGRLPTRIGHGSRAPSGDFPDKASQAESFSLANVIPQHSVSNR
RTWSHIETSTRRLARQHGAIQVVTGPAFVGTPRTLGHVHIPDFIWKAIHVPGIGAAVYLVRNDATPAYSVISVAELRHFA
GIDPFPTLPKAMNATAMDLPLPTPHPGEKAARRVAFAWLASGEAAAASRATEPLHQAIRDASAILSLALAHAR

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33491; Mature: 33360

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSGGQAEGVSTSTEFPSDDPPASRSSRSLPCIPHGKRTGHGTGLCSRPAYGPTHDSTSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHAVAVLPRLRRSLFEPDTHRAVVCRASHAGGRRRRAQAATRQRLLRRGATARSRPRQAG
CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHC
RLPTRIGHGSRAPSGDFPDKASQAESFSLANVIPQHSVSNRRTWSHIETSTRRLARQHGA
CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IQVVTGPAFVGTPRTLGHVHIPDFIWKAIHVPGIGAAVYLVRNDATPAYSVISVAELRHF
EEEEECCCEECCCCCCCEEECHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
AGIDPFPTLPKAMNATAMDLPLPTPHPGEKAARRVAFAWLASGEAAAASRATEPLHQAIR
CCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DASAILSLALAHAR
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PSGGQAEGVSTSTEFPSDDPPASRSSRSLPCIPHGKRTGHGTGLCSRPAYGPTHDSTSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHAVAVLPRLRRSLFEPDTHRAVVCRASHAGGRRRRAQAATRQRLLRRGATARSRPRQAG
CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHC
RLPTRIGHGSRAPSGDFPDKASQAESFSLANVIPQHSVSNRRTWSHIETSTRRLARQHGA
CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IQVVTGPAFVGTPRTLGHVHIPDFIWKAIHVPGIGAAVYLVRNDATPAYSVISVAELRHF
EEEEECCCEECCCCCCCEEECHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
AGIDPFPTLPKAMNATAMDLPLPTPHPGEKAARRVAFAWLASGEAAAASRATEPLHQAIR
CCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DASAILSLALAHAR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA