| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637991
Identifier: 38637991
GI number: 38637991
Start: 345557
End: 346555
Strand: Direct
Name: 38637991
Synonym: PHG330
Alternate gene names: NA
Gene position: 345557-346555 (Clockwise)
Preceding gene: 38637988
Following gene: 38637992
Centisome position: 76.42
GC content: 63.36
Gene sequence:
>999_bases ATGAGCACCAATACCATTGCGGTCGATGTCGGCTATGGAAACACCAAATTTGCCTTCCCCCTCGGCGCAGACGTGGCAGC CAGCATGTTTCCGTCGCTGGCCCCCACGCGCTCGGCATCCAGCCTTGCCAGCCACGGCGGTGGCTACTTCCAGGCTCGCG ATGTGGTCCATGTGACTGTTGATGGCGCCGAATACGAGGTGGGCCCAGACGTCTCGATCACCTCGGCCTATGGCAACAAC GGGCGCACCTTGTCGGAAGATTTCGTTACCACGCCTGAGTATGCAGCCCTGCTGTTTGGTGCGCTTCACTATTCCCAGGC CAGGGACGTAGGCCAACTCATCCTCGGCCTTCCCGTCCATACGCTGCAGAAGTACGCCGGCGCCTTGCAGGAGCGATTCA CCGGCGCCCATGACTTCGGCGCCGGCGACGTCACGATCAAGCGGGTCGTCGCGCTTCCCCAACCCCTCGGCTCGCTGGTG ACCTTTATGCGCCAGTCGGGGAAGGAACTGGATCCCGACGACAATTGCCTGATCGTGGATGTCGGCTACTTCACCACCGA CTGGGTTGTCGCCCGCGGCTACATGATGGACGACACCCGTAGCGGCGGCGTGCCGGGTGGGTCCTCTCGGATCTACAAGC AGGTGGCCACGCTCCTCTCCGCCGACGAAGGCGGCGAGCCAACCGGAGACATTGAGCGCATCGACAAGGCGCTGCGCCAG GGAAAGCTTATGCGCTACTACGAAAAGATGGTCGACCTGCGGCCGTACTTCGAAGTCGCCAAGGCCCAGTGCCAAATGGC TGTGAAGGAGATGCAGACCCGGGTGGGTCGCACGGAAGATATTGCGGCGATCGTCCTGACCGGTGGCGGTAGCGCCCTAT ACTCCGGCGCCATCCGCGCGGCCTTCCCGCGCTCGCACATCGTCGCCATGGATTCCCCCTGCTTCGCCAATGTCCGGGGC TTCTTCGACATCGGCAGCGCGCGTCAAGCCCGGGGCTGA
Upstream 100 bases:
>100_bases CACTTGCTTACACTTGGTGACACCAGATAGCCCGTGCTGTCATAGGTCTAACATCACCACCGCGCTCCGACTACGTTCAA CTTGCCAAGGAGAGCTTCAA
Downstream 100 bases:
>100_bases GTAACTGACTATGGAAAAGCTCGCGATCAAAGTTGCCCTCAGCCCGCTGACGACACCGCGGCTTTGCGCACAACTCGCCG AGATCAGCGATCCCCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSTNTIAVDVGYGNTKFAFPLGADVAASMFPSLAPTRSASSLASHGGGYFQARDVVHVTVDGAEYEVGPDVSITSAYGNN GRTLSEDFVTTPEYAALLFGALHYSQARDVGQLILGLPVHTLQKYAGALQERFTGAHDFGAGDVTIKRVVALPQPLGSLV TFMRQSGKELDPDDNCLIVDVGYFTTDWVVARGYMMDDTRSGGVPGGSSRIYKQVATLLSADEGGEPTGDIERIDKALRQ GKLMRYYEKMVDLRPYFEVAKAQCQMAVKEMQTRVGRTEDIAAIVLTGGGSALYSGAIRAAFPRSHIVAMDSPCFANVRG FFDIGSARQARG
Sequences:
>Translated_332_residues MSTNTIAVDVGYGNTKFAFPLGADVAASMFPSLAPTRSASSLASHGGGYFQARDVVHVTVDGAEYEVGPDVSITSAYGNN GRTLSEDFVTTPEYAALLFGALHYSQARDVGQLILGLPVHTLQKYAGALQERFTGAHDFGAGDVTIKRVVALPQPLGSLV TFMRQSGKELDPDDNCLIVDVGYFTTDWVVARGYMMDDTRSGGVPGGSSRIYKQVATLLSADEGGEPTGDIERIDKALRQ GKLMRYYEKMVDLRPYFEVAKAQCQMAVKEMQTRVGRTEDIAAIVLTGGGSALYSGAIRAAFPRSHIVAMDSPCFANVRG FFDIGSARQARG >Mature_331_residues STNTIAVDVGYGNTKFAFPLGADVAASMFPSLAPTRSASSLASHGGGYFQARDVVHVTVDGAEYEVGPDVSITSAYGNNG RTLSEDFVTTPEYAALLFGALHYSQARDVGQLILGLPVHTLQKYAGALQERFTGAHDFGAGDVTIKRVVALPQPLGSLVT FMRQSGKELDPDDNCLIVDVGYFTTDWVVARGYMMDDTRSGGVPGGSSRIYKQVATLLSADEGGEPTGDIERIDKALRQG KLMRYYEKMVDLRPYFEVAKAQCQMAVKEMQTRVGRTEDIAAIVLTGGGSALYSGAIRAAFPRSHIVAMDSPCFANVRGF FDIGSARQARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35580; Mature: 35448
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNTIAVDVGYGNTKFAFPLGADVAASMFPSLAPTRSASSLASHGGGYFQARDVVHVTV CCCCEEEEEECCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCEEEEEE DGAEYEVGPDVSITSAYGNNGRTLSEDFVTTPEYAALLFGALHYSQARDVGQLILGLPVH CCCEEECCCCCEEEEECCCCCCEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLQKYAGALQERFTGAHDFGAGDVTIKRVVALPQPLGSLVTFMRQSGKELDPDDNCLIVD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEE VGYFTTDWVVARGYMMDDTRSGGVPGGSSRIYKQVATLLSADEGGEPTGDIERIDKALRQ CCCCHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GKLMRYYEKMVDLRPYFEVAKAQCQMAVKEMQTRVGRTEDIAAIVLTGGGSALYSGAIRA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCCHHH AFPRSHIVAMDSPCFANVRGFFDIGSARQARG CCCCCEEEEECCCCHHCCCHHEECCCCCCCCC >Mature Secondary Structure STNTIAVDVGYGNTKFAFPLGADVAASMFPSLAPTRSASSLASHGGGYFQARDVVHVTV CCCEEEEEECCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCEEEEEE DGAEYEVGPDVSITSAYGNNGRTLSEDFVTTPEYAALLFGALHYSQARDVGQLILGLPVH CCCEEECCCCCEEEEECCCCCCEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLQKYAGALQERFTGAHDFGAGDVTIKRVVALPQPLGSLVTFMRQSGKELDPDDNCLIVD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEE VGYFTTDWVVARGYMMDDTRSGGVPGGSSRIYKQVATLLSADEGGEPTGDIERIDKALRQ CCCCHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GKLMRYYEKMVDLRPYFEVAKAQCQMAVKEMQTRVGRTEDIAAIVLTGGGSALYSGAIRA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCCHHH AFPRSHIVAMDSPCFANVRGFFDIGSARQARG CCCCCEEEEECCCCHHCCCHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA