| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637983
Identifier: 38637983
GI number: 38637983
Start: 336384
End: 337613
Strand: Direct
Name: 38637983
Synonym: PHG322
Alternate gene names: NA
Gene position: 336384-337613 (Clockwise)
Preceding gene: 38637982
Following gene: 38637984
Centisome position: 74.4
GC content: 65.45
Gene sequence:
>1230_bases ATGATCACCGTGCGGATTGGCGGGAACGAGTACCCGCTGGATGAGGTTTTGGAAGATCCCGGCCGCTACGCGCGCCACCT CGAGCGTGCCAAGACGATCCAGGGATTCGCGGAATGCGGCTGCGCAGAGGGCCGGCCGCGGCCCAAACTGGTGATCCGGC GACACCGCGATATTTTCCTGCTCGCGCGCTGGCCGGAACAGGCGTTCCGGCACGCCGAAGGATGCCCCTTCCACCGGAAG ACCCAGACAACGCCCGGCGCCGCCGACAGTCTCGACGCATTTCGCATGCGCGATGGCCGCCACGATATCCGCCTCGACGC CTCACTTTCGGTCAGCACCCACACACCGGCCAAAACCGTCCAGCGAACGCCGAAGGGCCAGTTCACAAAGCCGCAACGGC GATCCGCAGGCCTGCTGGCGCTCCTCGAATTCGCTTGGGAGCAGGCCGGTCTTAATGTCTGGCCTGGTACCGGTGCCCGC AGCTGGAACGGCTGCTGGTCACAGTTGACGGCCGAACTGGACGATTGCAGGATCAATGGCAAGGACGCCGACGGCCTGCT GCACGTCATGCAGCGGTGGGACCCGGCGCGGAAGTCCGAAATCCTGGCCGAGTTCGAGGCGTGGCAGGCTAGGCTTTCGC CTACCGCCGCCGGGAATCCCCGCGGCATTCTGATCGGCGAAATCGAGTCGCACGCCGCCACCCAGTACGGAGGGAAGGTC GTCCTGCGCCAGAGCACGCAGCGGTTCTTCATGTCCTCGGGACTGTACGAACGCCTGCAGGCTTCCTTTGGCACCGCGCT GGCCGGCATCGGACGGGCCGAGCAACGGTGTGTCGCTGTCCTGCTCGTTGAGAAGTCCCGCTCGAACTACCTGACGGTCG TCGATATTGGCGCCATGCTGGCAAACCGGCAGTTCCTGCCTTGCGACTCCTCCCATGAGGTCGCCATGGCCGATCACCTG GTCGCTCTGCGCCGGGCATTTCGCAAGCCGCTGCGGCATATCGGCCGAGCGGAGGTACACCCCGACTTCGTCCTGACCGA TGTCCAGCCCGAAACGGTCATCGAAGTACTCGGCATGGCCGGCAATCCCGCGTACGACGCTCGGACGGCGAGCAAGCGCC AGCACTACCAGACTGCCGGCGTTCCATTTCTGGAATGGGATGCGGTAGCCACGTCGATTTCCAGCGTCCGCGTGCCGCCG GCTGGCACACGGGCAGCCGATGCACGCTGA
Upstream 100 bases:
>100_bases TACGTCGCCATGACACGCGCGAAGCGCCTGCTCGATGTGAGCGAGATCCGGCGCGACCTCTACACCATGTTCCGGGAAGC CGGTGTCTAAAGGAGAGACC
Downstream 100 bases:
>100_bases TCGGATCCCGATCGCCGACGCCCTGTATGGCAAGGCGCTGGAACTGGTGCATCAGCACCGCGCCGCGTCAGTTGCGCTTC TGGAGCGCCATCTCGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MITVRIGGNEYPLDEVLEDPGRYARHLERAKTIQGFAECGCAEGRPRPKLVIRRHRDIFLLARWPEQAFRHAEGCPFHRK TQTTPGAADSLDAFRMRDGRHDIRLDASLSVSTHTPAKTVQRTPKGQFTKPQRRSAGLLALLEFAWEQAGLNVWPGTGAR SWNGCWSQLTAELDDCRINGKDADGLLHVMQRWDPARKSEILAEFEAWQARLSPTAAGNPRGILIGEIESHAATQYGGKV VLRQSTQRFFMSSGLYERLQASFGTALAGIGRAEQRCVAVLLVEKSRSNYLTVVDIGAMLANRQFLPCDSSHEVAMADHL VALRRAFRKPLRHIGRAEVHPDFVLTDVQPETVIEVLGMAGNPAYDARTASKRQHYQTAGVPFLEWDAVATSISSVRVPP AGTRAADAR
Sequences:
>Translated_409_residues MITVRIGGNEYPLDEVLEDPGRYARHLERAKTIQGFAECGCAEGRPRPKLVIRRHRDIFLLARWPEQAFRHAEGCPFHRK TQTTPGAADSLDAFRMRDGRHDIRLDASLSVSTHTPAKTVQRTPKGQFTKPQRRSAGLLALLEFAWEQAGLNVWPGTGAR SWNGCWSQLTAELDDCRINGKDADGLLHVMQRWDPARKSEILAEFEAWQARLSPTAAGNPRGILIGEIESHAATQYGGKV VLRQSTQRFFMSSGLYERLQASFGTALAGIGRAEQRCVAVLLVEKSRSNYLTVVDIGAMLANRQFLPCDSSHEVAMADHL VALRRAFRKPLRHIGRAEVHPDFVLTDVQPETVIEVLGMAGNPAYDARTASKRQHYQTAGVPFLEWDAVATSISSVRVPP AGTRAADAR >Mature_409_residues MITVRIGGNEYPLDEVLEDPGRYARHLERAKTIQGFAECGCAEGRPRPKLVIRRHRDIFLLARWPEQAFRHAEGCPFHRK TQTTPGAADSLDAFRMRDGRHDIRLDASLSVSTHTPAKTVQRTPKGQFTKPQRRSAGLLALLEFAWEQAGLNVWPGTGAR SWNGCWSQLTAELDDCRINGKDADGLLHVMQRWDPARKSEILAEFEAWQARLSPTAAGNPRGILIGEIESHAATQYGGKV VLRQSTQRFFMSSGLYERLQASFGTALAGIGRAEQRCVAVLLVEKSRSNYLTVVDIGAMLANRQFLPCDSSHEVAMADHL VALRRAFRKPLRHIGRAEVHPDFVLTDVQPETVIEVLGMAGNPAYDARTASKRQHYQTAGVPFLEWDAVATSISSVRVPP AGTRAADAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45362; Mature: 45362
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVRIGGNEYPLDEVLEDPGRYARHLERAKTIQGFAECGCAEGRPRPKLVIRRHRDIFL CEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEE LARWPEQAFRHAEGCPFHRKTQTTPGAADSLDAFRMRDGRHDIRLDASLSVSTHTPAKTV EEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECEEEECCCCCHHHH QRTPKGQFTKPQRRSAGLLALLEFAWEQAGLNVWPGTGARSWNGCWSQLTAELDDCRING HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCEECC KDADGLLHVMQRWDPARKSEILAEFEAWQARLSPTAAGNPRGILIGEIESHAATQYGGKV CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCEE VLRQSTQRFFMSSGLYERLQASFGTALAGIGRAEQRCVAVLLVEKSRSNYLTVVDIGAML EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCEEEEEEHHHHH ANRQFLPCDSSHEVAMADHLVALRRAFRKPLRHIGRAEVHPDFVLTDVQPETVIEVLGMA HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCC GNPAYDARTASKRQHYQTAGVPFLEWDAVATSISSVRVPPAGTRAADAR CCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MITVRIGGNEYPLDEVLEDPGRYARHLERAKTIQGFAECGCAEGRPRPKLVIRRHRDIFL CEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEE LARWPEQAFRHAEGCPFHRKTQTTPGAADSLDAFRMRDGRHDIRLDASLSVSTHTPAKTV EEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECEEEECCCCCHHHH QRTPKGQFTKPQRRSAGLLALLEFAWEQAGLNVWPGTGARSWNGCWSQLTAELDDCRING HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCEECC KDADGLLHVMQRWDPARKSEILAEFEAWQARLSPTAAGNPRGILIGEIESHAATQYGGKV CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCEE VLRQSTQRFFMSSGLYERLQASFGTALAGIGRAEQRCVAVLLVEKSRSNYLTVVDIGAML EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCEEEEEEHHHHH ANRQFLPCDSSHEVAMADHLVALRRAFRKPLRHIGRAEVHPDFVLTDVQPETVIEVLGMA HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCC GNPAYDARTASKRQHYQTAGVPFLEWDAVATSISSVRVPPAGTRAADAR CCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA