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The map label for this gene is hoxO

Identifier: 38637675

GI number: 38637675

Start: 5234

End: 5719

Strand: Direct

Name: hoxO

Synonym: PHG007

Alternate gene names: 38637675

Gene position: 5234-5719 (Clockwise)

Preceding gene: 38637674

Following gene: 38637676

Centisome position: 1.16

GC content: 61.93

Gene sequence:

>486_bases
ATGTCGACCGAATCAGCGATGTTTCTTGCCCCCATCCCGACGACGGACGCAGTACCGCCGGTGATCGAACGTCTGGTCGA
ACAGCATCAGGCTGCCTGGGTTGACCAGGATTCCATTGACGACTGGCTGGCTGGCGGCGGCGATTGCGTGCTGTTTATCG
CCGGCGACCCGGTGCGCTTTCCCGAGTGCGTGGATGTCGCTGTCGTGTTGCCGGAGTTGCAAAGGGTGTTCTTCAATGGT
TTTCGCATTGGCGTGGCGAAACGTGAACGTGAGCACGAAGATGTGCTGGCGAATCGCTTTGGCACGCAGCGTCGACCGTC
GCTGGTGTTCTTGCGAGACGGTGCCTATGTGAGCGTAATCGCCGGCATGCGCGACTGGGACGAATACGTGCGCGAGGTCC
GGCGGGCGCTCGCGATGCCGACTTCACGGCCGCCATCCATCGGCATTCCAGTGATTTCGGCGGCAGCCGGCGGCAGTTGC
CACTGA

Upstream 100 bases:

>100_bases
GAAGCGCAACCACGTTTTGAACTGCCATCGGCGATGGCCCGCGAGGACCTCGCCGTTCTATCCAACTCCAGAGATTCTTC
CTCTTACTAAGGTAACTTTC

Downstream 100 bases:

>100_bases
TCCGTCGAACAATGCCTCACAGGACAACGCGATGAATTCATTTCCCATTCCGGTCGTGCTGCTCGGTCCCGGTTCGCAAG
CCGAGGATGAAACGCTCGAT

Product: HoxO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSTESAMFLAPIPTTDAVPPVIERLVEQHQAAWVDQDSIDDWLAGGGDCVLFIAGDPVRFPECVDVAVVLPELQRVFFNG
FRIGVAKREREHEDVLANRFGTQRRPSLVFLRDGAYVSVIAGMRDWDEYVREVRRALAMPTSRPPSIGIPVISAAAGGSC
H

Sequences:

>Translated_161_residues
MSTESAMFLAPIPTTDAVPPVIERLVEQHQAAWVDQDSIDDWLAGGGDCVLFIAGDPVRFPECVDVAVVLPELQRVFFNG
FRIGVAKREREHEDVLANRFGTQRRPSLVFLRDGAYVSVIAGMRDWDEYVREVRRALAMPTSRPPSIGIPVISAAAGGSC
H
>Mature_160_residues
STESAMFLAPIPTTDAVPPVIERLVEQHQAAWVDQDSIDDWLAGGGDCVLFIAGDPVRFPECVDVAVVLPELQRVFFNGF
RIGVAKREREHEDVLANRFGTQRRPSLVFLRDGAYVSVIAGMRDWDEYVREVRRALAMPTSRPPSIGIPVISAAAGGSCH

Specific function: Not Known. Could Form, Along With Hyad, A Complex Involved In The Processing Of The Hydrogenase 1 Structural Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupG/hyaE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HOXO_CUPNH (P31910)

Other databases:

- EMBL:   M96433
- EMBL:   AY305378
- PIR:   G43255
- RefSeq:   NP_942649.1
- ProteinModelPortal:   P31910
- SMR:   P31910
- GeneID:   2656428
- GenomeReviews:   AY305378_GR
- KEGG:   reh:PHG007
- HOGENOM:   HBG671292
- OMA:   KIQDWSV
- PhylomeDB:   P31910
- ProtClustDB:   CLSK923793
- BioCyc:   REUT381666:PHG007-MONOMER
- InterPro:   IPR010893
- InterPro:   IPR012336
- InterPro:   IPR012335
- Gene3D:   G3DSA:3.40.30.10

Pfam domain/function: PF07449 HyaE; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 17719; Mature: 17588

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTESAMFLAPIPTTDAVPPVIERLVEQHQAAWVDQDSIDDWLAGGGDCVLFIAGDPVRF
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCC
PECVDVAVVLPELQRVFFNGFRIGVAKREREHEDVLANRFGTQRRPSLVFLRDGAYVSVI
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEH
AGMRDWDEYVREVRRALAMPTSRPPSIGIPVISAAAGGSCH
HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
STESAMFLAPIPTTDAVPPVIERLVEQHQAAWVDQDSIDDWLAGGGDCVLFIAGDPVRF
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCC
PECVDVAVVLPELQRVFFNGFRIGVAKREREHEDVLANRFGTQRRPSLVFLRDGAYVSVI
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEH
AGMRDWDEYVREVRRALAMPTSRPPSIGIPVISAAAGGSCH
HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488