| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ilvA [H]
Identifier: 37681428
GI number: 37681428
Start: 3335928
End: 3337457
Strand: Direct
Name: ilvA [H]
Synonym: VV3244
Alternate gene names: 37681428
Gene position: 3335928-3337457 (Clockwise)
Preceding gene: 37681427
Following gene: 161486583
Centisome position: 99.45
GC content: 52.61
Gene sequence:
>1530_bases ATGTCATTAACCCAACAAACTGGCGCAGACTACCTGCGCCAGATACTACGCGCTCCAGTGTATGAAGTGGCAACCGTCAC CCCTTTGCAAGAGATGCCGCGTTTATCGGCACGTATTGGTAACAATGTGCAGATCAAACGTGAAGACCGCCAGCCGGTGC ATTCGTTTAAGTTACGTGGCGCTTACAATATGGTGGCCAATCTGTCGCAAGCGCAGAAGGACGCGGGGGTGATTGCTGCC TCTGCGGGCAACCATGCGCAAGGCATGGCTCTGTCAGGAACGCGCCTTGGCATTGAAACCACCATCGTGATGCCTCGCAC GACGCCGGATATCAAAGTCGACGCGGTGCGCGGTTTTGGCGGCAAAGTCGTCTTGCACGGCAGCAACTTCGATGAAGCCA AAGCCGAAGCCGAGCGTCTTTCGCAAGAGAAAGGTTACACTTTTGTCCCACCTTTCGATCATCCTTTAGTGATTGCTGGG CAAGGCACCATCGGCATGGAAATGCTGCAGCAAAACGGCCATCTCGACCACATTTTCGTCCCTGTTGGGGGCGGTGGTTT AGCCGCTGGTGTGGCGGTGTTGGTGAAACAGCTGATGCCAGAGATCAAAGTCATTGCGGTGGAACCTGAAGATTCTGCCT GCCTCAAGGCGGCATTGGATGCAGGTGAGCCTGTGGTGCTGGATCAAGTCAGTATGTTTGCTGATGGTGTGGCGGTAAAA CGCATTGGCGATGAAACTTTCCGTCTATGCCAGCACTACATTGACGATCACGTCACCGTCTCCAGTGATGAAATCTGCGC GGCGGTCAAAGATATTTTCGAAGACACCCGTGCGATTGCTGAGCCTTCCGGAGCACTGGCGCTGGCGGGGCTGAAAAAGT ATGCCGAGAAACACAAACTCAAAGGACACAACTTGGGTACCGTGCTTTCGGGTGCCAATACCAACTTCCACGGTTTACGT TATGTTTCCGAGCGTTGTGAGCTGGGTGAAAAACGCGAAGGCTTGCTTGCGGTGACCATTCCAGAGCGCAAAGGGGCATT TTTTGAGTTCTGCCATTTGATTGGTGGCCGTGCGGTGACGGAGTTCAACTACCGTTACAACGACGACTCGCTGGCCAATA TTTTTGTCGGTGTTCGTCTGCAAAATGGTCAAGAGGAGTTGGATGGTATCATTCGCGACTTACGCGAAGGCGGCTACCCA GTGGTGGACCTTTCTGAGGATGAAATGGCCAAGCTGCACGTACGCTACATGATTGGCGGTAAACCCTCCAAACCACTCAA AGAGCGCTTATACAGCTTTGAGTTTCCAGAATACCCAGGCGCACTGCTTAAGTTCCTGAGCACACTGGGCACACACTGGA ACATTAGCCTATTTAACTACCGCAACCATGGGGCCGATTATGGCCGCGTACTGTGTGGTTTTGAGCTTGATGAGAGTGAT TTATCCCGCTTTTCGGCGCATTTGCGCGAACTTGGCTACCAATGCAAAGATGTCACGGATAACCCATCCTACCGTTTCTT TCTTTCCTAA
Upstream 100 bases:
>100_bases CCAACGCGAAGTGTCGTTTGCGCTGAAAGCCTACGCCAGCATGGCAACCAGTGCCGATAAAGGCGCGGTAAGAGACAAGT CAAAGCTTGAGGGCTAAGCA
Downstream 100 bases:
>100_bases TGCTGTTAAAAACGCCCTGTCAGACAGGGCGTTTTGTTTCGCTCAGCAACCAATCTTGATGCAGTTGATGTGAGTTTCCT AAGTAGTCCACCATCCACTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVIAA SAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYP VVDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD LSRFSAHLRELGYQCKDVTDNPSYRFFLS
Sequences:
>Translated_509_residues MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVIAA SAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAG QGTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLR YVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYP VVDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD LSRFSAHLRELGYQCKDVTDNPSYRFFLS >Mature_508_residues SLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRGAYNMVANLSQAQKDAGVIAAS AGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFGGKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQ GTIGMEMLQQNGHLDHIFVPVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVKR IGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKLKGHNLGTVLSGANTNFHGLRY VSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVTEFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPV VDLSEDEMAKLHVRYMIGGKPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESDL SRFSAHLRELGYQCKDVTDNPSYRFFLS
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=296, Percent_Identity=34.4594594594595, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI33469958, Length=314, Percent_Identity=28.9808917197452, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI19923959, Length=273, Percent_Identity=32.2344322344322, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1790207, Length=502, Percent_Identity=70.9163346613546, Blast_Score=722, Evalue=0.0, Organism=Escherichia coli, GI1789505, Length=295, Percent_Identity=37.9661016949153, Blast_Score=181, Evalue=8e-47, Organism=Caenorhabditis elegans, GI71991565, Length=329, Percent_Identity=34.0425531914894, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17537387, Length=321, Percent_Identity=35.202492211838, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17508781, Length=261, Percent_Identity=33.7164750957854, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320930, Length=521, Percent_Identity=48.5604606525912, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=36.5131578947368, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319788, Length=264, Percent_Identity=26.5151515151515, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355833, Length=315, Percent_Identity=34.6031746031746, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24645328, Length=251, Percent_Identity=32.6693227091633, Blast_Score=108, Evalue=7e-24,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55960; Mature: 55829
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRG CCCCHHCCHHHHHHHHHCCHHHHHCCCCHHHCCHHHHHCCCCEEEEECCCCCCHHEECCC AYNMVANLSQAQKDAGVIAASAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFG HHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEECCC GKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDHIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKL HCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC KGHNLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVT CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEE EFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPVVDLSEDEMAKLHVRYMIGG EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHEEEEEEEECC KPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCHHH LSRFSAHLRELGYQCKDVTDNPSYRFFLS HHHHHHHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure SLTQQTGADYLRQILRAPVYEVATVTPLQEMPRLSARIGNNVQIKREDRQPVHSFKLRG CCCHHCCHHHHHHHHHCCHHHHHCCCCHHHCCHHHHHCCCCEEEEECCCCCCHHEECCC AYNMVANLSQAQKDAGVIAASAGNHAQGMALSGTRLGIETTIVMPRTTPDIKVDAVRGFG HHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCCEECEEEEEEECCCCCCEEEEEEECCC GKVVLHGSNFDEAKAEAERLSQEKGYTFVPPFDHPLVIAGQGTIGMEMLQQNGHLDHIFV CEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCHHHHHHHCCCCEEEEEE PVGGGGLAAGVAVLVKQLMPEIKVIAVEPEDSACLKAALDAGEPVVLDQVSMFADGVAVK EECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHHHHHHCCHHHH RIGDETFRLCQHYIDDHVTVSSDEICAAVKDIFEDTRAIAEPSGALALAGLKKYAEKHKL HCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC KGHNLGTVLSGANTNFHGLRYVSERCELGEKREGLLAVTIPERKGAFFEFCHLIGGRAVT CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEE EFNYRYNDDSLANIFVGVRLQNGQEELDGIIRDLREGGYPVVDLSEDEMAKLHVRYMIGG EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCHHHEEEEEEEECC KPSKPLKERLYSFEFPEYPGALLKFLSTLGTHWNISLFNYRNHGADYGRVLCGFELDESD CCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEECCCCHHH LSRFSAHLRELGYQCKDVTDNPSYRFFLS HHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]