| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is pepA [H]
Identifier: 37681091
GI number: 37681091
Start: 2966834
End: 2968342
Strand: Direct
Name: pepA [H]
Synonym: VV2907
Alternate gene names: 37681091
Gene position: 2966834-2968342 (Clockwise)
Preceding gene: 37681087
Following gene: 37681093
Centisome position: 88.44
GC content: 48.71
Gene sequence:
>1509_bases ATGGAGTTCAGTGTAAAAAGTGGCAGTCCAGAGAAACAACGTAGCGCATGTATCGTTGTTGGTGTGTTTGAACCACGTCG CCTTTCTCCAGTAGCCGAACAGCTCGATAAAATCAGTGACGGTTACATCAGTTCACTACTTCGCCGTGGTGATCTAGAAG GTAAACCAGGTCAGATGCTACTGCTGCATCAAGTTCCAGGTGTGCTTTCTGAACGTGTTCTTTTGGTTGGTTGCGGTAAA GAGCGTGAGCTTGGTGAGCGCCAATATAAAGAGATCATTCAGAAAACCATCAATACACTTAACGAAACAGGCTCTATGGA AGCGGTGTGCTTCCTAACTGAACTGCACGTTAAAGGCCGTGACACGTACTGGAAAGTGCGCCAAGCGGTTGAAGCAACGA AAGATGGCCTGTATACCTTTGATCAATTCAAGAGCGTGAAGCCAGAAACACGTCGCCCACTACGTAAGCTTGTCTTCAAC GTACCAACACGTCGTGAACTGAACCTTGGCGAGAAAGCCATCACTCACGGTTTGGCGATTGCTTCAGGTGTGAAAGCCTG TAAAGACCTTGGCAACATGCCACCAAACATCGCAAACCCAGCTTACCTCGCCTCTCAAGCGCGTCGTCTGGCAGATGACT ACGAAACCATCACCACCAAAATCATCGGTGAGCAAGAGATGGAAAAACTGGGTATGTCTTCTTACCTAGCGGTCGGTCGC GGTTCAAAAAATGAATCGATGATGTCTATCATCGAATACAAAGGCCATCCAGATTCAGAAGCCAAACCGATTGTTCTTGT CGGTAAAGGTCTAACATTCGATTCAGGCGGTATTTCACTGAAACCAGGCGAAGGCATGGATGAAATGAAATACGACATGT GTGGTGCAGCCTCCGTATTCGGCACGATGAAAGCGCTGGCAAAACTGAACCTACCAGTCAACGTGATTGGCGTACTTGCT GGTTGTGAAAACATGCCAGGCAGCAACGCTTACCGTCCAGGTGATATCCTAACGACTATGTCAGGTCAAACCGTAGAAGT ACTCAATACCGATGCAGAAGGTCGTTTGGTACTGTGTGATGCACTGACTTACGTTGAGCGTTTTGAACCAGACTGCGTGG TTGACGTTGCGACGCTCACTGGCGCTTGTGTTATTGCACTGGGTCACCACATTACTGGTGTTCTGTCTAACCACAACCCT CTTGCTCATGAGCTCGTCAATGCTTCTGAACAATCTAGCGATCGTGCTTGGCGCCTACCAATGGCGGATGAATACCATGA ACAGCTAAAGAGCCCATTTGCCGACATGGCAAACATTGGCGGCCGTCCTGGTGGTACCATCACAGCAGCATGCTTCTTGT CTAAATTTGCTAAGAAATACAACTGGGCACACCTAGACATCGCAGGCACAGCATGGAAGTCTGGCGCAGCCAAAGGGTCG ACAGGTCGTCCTGTCTCTATGCTGGTCCAATTCCTGCTAAATCGCAGTGGCCAAGAGACTGAAGAATAA
Upstream 100 bases:
>100_bases TAATCTGTAACTTACAGAGTAGACCGAGAATAGAATTCAACAAGTAAGCGGTCATTATCTAACATTTAGAACTATTTGTC TTCAGGATGTAGGAGTACGC
Downstream 100 bases:
>100_bases TTCAAGTCAATGTAAAAAGGGCCGCAAGGCCCTTTTTTTCATCGCCAGAGAGACGAACAAGCTATGCAAAGAGCCACGTT TTACATTGTCCGAGAACACA
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MEFSVKSGSPEKQRSACIVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQMLLLHQVPGVLSERVLLVGCGK ERELGERQYKEIIQKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVEATKDGLYTFDQFKSVKPETRRPLRKLVFN VPTRRELNLGEKAITHGLAIASGVKACKDLGNMPPNIANPAYLASQARRLADDYETITTKIIGEQEMEKLGMSSYLAVGR GSKNESMMSIIEYKGHPDSEAKPIVLVGKGLTFDSGGISLKPGEGMDEMKYDMCGAASVFGTMKALAKLNLPVNVIGVLA GCENMPGSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDALTYVERFEPDCVVDVATLTGACVIALGHHITGVLSNHNP LAHELVNASEQSSDRAWRLPMADEYHEQLKSPFADMANIGGRPGGTITAACFLSKFAKKYNWAHLDIAGTAWKSGAAKGS TGRPVSMLVQFLLNRSGQETEE
Sequences:
>Translated_502_residues MEFSVKSGSPEKQRSACIVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQMLLLHQVPGVLSERVLLVGCGK ERELGERQYKEIIQKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVEATKDGLYTFDQFKSVKPETRRPLRKLVFN VPTRRELNLGEKAITHGLAIASGVKACKDLGNMPPNIANPAYLASQARRLADDYETITTKIIGEQEMEKLGMSSYLAVGR GSKNESMMSIIEYKGHPDSEAKPIVLVGKGLTFDSGGISLKPGEGMDEMKYDMCGAASVFGTMKALAKLNLPVNVIGVLA GCENMPGSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDALTYVERFEPDCVVDVATLTGACVIALGHHITGVLSNHNP LAHELVNASEQSSDRAWRLPMADEYHEQLKSPFADMANIGGRPGGTITAACFLSKFAKKYNWAHLDIAGTAWKSGAAKGS TGRPVSMLVQFLLNRSGQETEE >Mature_502_residues MEFSVKSGSPEKQRSACIVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQMLLLHQVPGVLSERVLLVGCGK ERELGERQYKEIIQKTINTLNETGSMEAVCFLTELHVKGRDTYWKVRQAVEATKDGLYTFDQFKSVKPETRRPLRKLVFN VPTRRELNLGEKAITHGLAIASGVKACKDLGNMPPNIANPAYLASQARRLADDYETITTKIIGEQEMEKLGMSSYLAVGR GSKNESMMSIIEYKGHPDSEAKPIVLVGKGLTFDSGGISLKPGEGMDEMKYDMCGAASVFGTMKALAKLNLPVNVIGVLA GCENMPGSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDALTYVERFEPDCVVDVATLTGACVIALGHHITGVLSNHNP LAHELVNASEQSSDRAWRLPMADEYHEQLKSPFADMANIGGRPGGTITAACFLSKFAKKYNWAHLDIAGTAWKSGAAKGS TGRPVSMLVQFLLNRSGQETEE
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=377, Percent_Identity=39.2572944297082, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI47155554, Length=324, Percent_Identity=32.7160493827161, Blast_Score=138, Evalue=1e-32, Organism=Escherichia coli, GI1790710, Length=503, Percent_Identity=79.9204771371769, Blast_Score=849, Evalue=0.0, Organism=Escherichia coli, GI87082123, Length=320, Percent_Identity=37.1875, Blast_Score=185, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17556903, Length=324, Percent_Identity=31.7901234567901, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17565172, Length=214, Percent_Identity=30.8411214953271, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI21355725, Length=518, Percent_Identity=29.9227799227799, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24661038, Length=332, Percent_Identity=35.2409638554217, Blast_Score=198, Evalue=9e-51, Organism=Drosophila melanogaster, GI20129969, Length=520, Percent_Identity=28.8461538461538, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24662227, Length=505, Percent_Identity=29.9009900990099, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI21355645, Length=494, Percent_Identity=28.7449392712551, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24662223, Length=494, Percent_Identity=28.7449392712551, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI161077148, Length=492, Percent_Identity=28.0487804878049, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI20130057, Length=492, Percent_Identity=28.0487804878049, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI19922386, Length=494, Percent_Identity=29.3522267206478, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI20129963, Length=504, Percent_Identity=28.7698412698413, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI21357381, Length=308, Percent_Identity=32.4675324675325, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI221379063, Length=308, Percent_Identity=32.4675324675325, Blast_Score=135, Evalue=9e-32, Organism=Drosophila melanogaster, GI221379062, Length=308, Percent_Identity=32.4675324675325, Blast_Score=135, Evalue=9e-32, Organism=Drosophila melanogaster, GI24646701, Length=360, Percent_Identity=26.3888888888889, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24646703, Length=360, Percent_Identity=26.3888888888889, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI21358201, Length=360, Percent_Identity=26.3888888888889, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 54629; Mature: 54629
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSVKSGSPEKQRSACIVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQML CCCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEE LLHQVPGVLSERVLLVGCGKERELGERQYKEIIQKTINTLNETGSMEAVCFLTELHVKGR EEECCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC DTYWKVRQAVEATKDGLYTFDQFKSVKPETRRPLRKLVFNVPTRRELNLGEKAITHGLAI CHHHHHHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ASGVKACKDLGNMPPNIANPAYLASQARRLADDYETITTKIIGEQEMEKLGMSSYLAVGR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHCC GSKNESMMSIIEYKGHPDSEAKPIVLVGKGLTFDSGGISLKPGEGMDEMKYDMCGAASVF CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCEEECCCCCHHHHHHHHHHHHHHH GTMKALAKLNLPVNVIGVLAGCENMPGSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCD HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEH ALTYVERFEPDCVVDVATLTGACVIALGHHITGVLSNHNPLAHELVNASEQSSDRAWRLP HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECC MADEYHEQLKSPFADMANIGGRPGGTITAACFLSKFAKKYNWAHLDIAGTAWKSGAAKGS CCHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC TGRPVSMLVQFLLNRSGQETEE CCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEFSVKSGSPEKQRSACIVVGVFEPRRLSPVAEQLDKISDGYISSLLRRGDLEGKPGQML CCCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEE LLHQVPGVLSERVLLVGCGKERELGERQYKEIIQKTINTLNETGSMEAVCFLTELHVKGR EEECCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC DTYWKVRQAVEATKDGLYTFDQFKSVKPETRRPLRKLVFNVPTRRELNLGEKAITHGLAI CHHHHHHHHHHHHHCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ASGVKACKDLGNMPPNIANPAYLASQARRLADDYETITTKIIGEQEMEKLGMSSYLAVGR HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHCC GSKNESMMSIIEYKGHPDSEAKPIVLVGKGLTFDSGGISLKPGEGMDEMKYDMCGAASVF CCCCHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCEEECCCCCHHHHHHHHHHHHHHH GTMKALAKLNLPVNVIGVLAGCENMPGSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCD HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEH ALTYVERFEPDCVVDVATLTGACVIALGHHITGVLSNHNPLAHELVNASEQSSDRAWRLP HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECC MADEYHEQLKSPFADMANIGGRPGGTITAACFLSKFAKKYNWAHLDIAGTAWKSGAAKGS CCHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC TGRPVSMLVQFLLNRSGQETEE CCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA