| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681073
Identifier: 37681073
GI number: 37681073
Start: 2941941
End: 2942672
Strand: Direct
Name: 37681073
Synonym: VV2889
Alternate gene names: NA
Gene position: 2941941-2942672 (Clockwise)
Preceding gene: 37681072
Following gene: 37681075
Centisome position: 87.7
GC content: 44.13
Gene sequence:
>732_bases ATGCGCTCAGAAATTCTCTATGAAGAAGGCTCCCACCGTTGGTTGATGTTTGGTAGAGATCCTCATAAGCCTGACAAAAT CATCGATACTAATCAGTATATGCTGGTACACAACGGCCAGGCGATGCTCCTCGACCCTGGTGGTATCGAGCTTTTCTCTG CCATGCTCAGTAGTGTTGTGAAAGAAATATCACTTGAGCAAATTACCCATCTATTTGCATCGCATCAAGATCCCGACATC ATCTCCTCTCTTGGACTTTGGGATAAAACCCTCCCCTCAGCAACACTCCATTCACCTTGGCTTTGGGAAGGCTTTATTCG TCATTTTGGTATGGAATCTATCACCTTTGCTCCGATCAAAGATCAAGGTGGAACGGTGTCATTAGCAGGGTTAGATATTC AATTTATTCCGGCCCACTATATGCATTCTTCAGGAAATTTTTCCGTCTATGACCCTGAAGCAAAGATCTTAATGTCCGGA GATATTGGCGCCGCACTTGATCGTATCGATGCACCACTTTTCGTTGAAGACTTTGGTAGTCATATCGAAAAAATGGCCTA TTTTCATCAACGTTGGATGCCATCGGAAAAAGCCAAATCAGCATGGATTGACAAGGTAAGCCAACTGGATATAGAGATGA TGTGCCCGCAACACGGCGGTATTTTCCGTGGTGATGACGTGCCACGTTTTTTAGATTGGCTAGATAAGTTAGAAGTCGGT ATTGCAGTTTAA
Upstream 100 bases:
>100_bases TCGCCGATAGTGTAACGGAATTCTCTGATGCAATTCGCCATCATGTTTCACTCTCTCTTAAACTCTTTTCGCTCTTTTTG TAATAAGGACATTAAAAATT
Downstream 100 bases:
>100_bases TTAGTGTTATCCCAACACTTAAAAAGACAGAAAGTGAGGATTCAAAAGAAAGTAGCAGCCTATAAATGCCTAAGCGACTC TAAGAGTAACGTACCAAATA
Product: uncharacterized flavoprotein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Flavoprotein; Histidine Kinase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Domain Protein; Two-Component Sensor Histidine Kinase; Metallo-Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Diguanylate Cyclase Domain Protein; Metallo-Beta-Lactamase Domain Protein; CDP-Abequose Synthase
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRSEILYEEGSHRWLMFGRDPHKPDKIIDTNQYMLVHNGQAMLLDPGGIELFSAMLSSVVKEISLEQITHLFASHQDPDI ISSLGLWDKTLPSATLHSPWLWEGFIRHFGMESITFAPIKDQGGTVSLAGLDIQFIPAHYMHSSGNFSVYDPEAKILMSG DIGAALDRIDAPLFVEDFGSHIEKMAYFHQRWMPSEKAKSAWIDKVSQLDIEMMCPQHGGIFRGDDVPRFLDWLDKLEVG IAV
Sequences:
>Translated_243_residues MRSEILYEEGSHRWLMFGRDPHKPDKIIDTNQYMLVHNGQAMLLDPGGIELFSAMLSSVVKEISLEQITHLFASHQDPDI ISSLGLWDKTLPSATLHSPWLWEGFIRHFGMESITFAPIKDQGGTVSLAGLDIQFIPAHYMHSSGNFSVYDPEAKILMSG DIGAALDRIDAPLFVEDFGSHIEKMAYFHQRWMPSEKAKSAWIDKVSQLDIEMMCPQHGGIFRGDDVPRFLDWLDKLEVG IAV >Mature_243_residues MRSEILYEEGSHRWLMFGRDPHKPDKIIDTNQYMLVHNGQAMLLDPGGIELFSAMLSSVVKEISLEQITHLFASHQDPDI ISSLGLWDKTLPSATLHSPWLWEGFIRHFGMESITFAPIKDQGGTVSLAGLDIQFIPAHYMHSSGNFSVYDPEAKILMSG DIGAALDRIDAPLFVEDFGSHIEKMAYFHQRWMPSEKAKSAWIDKVSQLDIEMMCPQHGGIFRGDDVPRFLDWLDKLEVG IAV
Specific function: Unknown
COG id: COG0426
COG function: function code C; Uncharacterized flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27457; Mature: 27457
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSEILYEEGSHRWLMFGRDPHKPDKIIDTNQYMLVHNGQAMLLDPGGIELFSAMLSSVV CCCCCEEECCCCEEEEECCCCCCCCCEECCCCEEEEECCCEEEECCCCHHHHHHHHHHHH KEISLEQITHLFASHQDPDIISSLGLWDKTLPSATLHSPWLWEGFIRHFGMESITFAPIK HHHHHHHHHHHHHCCCCCHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC DQGGTVSLAGLDIQFIPAHYMHSSGNFSVYDPEAKILMSGDIGAALDRIDAPLFVEDFGS CCCCEEEEEECEEEEECHHHEECCCCEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHH HIEKMAYFHQRWMPSEKAKSAWIDKVSQLDIEMMCPQHGGIFRGDDVPRFLDWLDKLEVG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCEECCCCCHHHHHHHHHHHHC IAV CCC >Mature Secondary Structure MRSEILYEEGSHRWLMFGRDPHKPDKIIDTNQYMLVHNGQAMLLDPGGIELFSAMLSSVV CCCCCEEECCCCEEEEECCCCCCCCCEECCCCEEEEECCCEEEECCCCHHHHHHHHHHHH KEISLEQITHLFASHQDPDIISSLGLWDKTLPSATLHSPWLWEGFIRHFGMESITFAPIK HHHHHHHHHHHHHCCCCCHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC DQGGTVSLAGLDIQFIPAHYMHSSGNFSVYDPEAKILMSGDIGAALDRIDAPLFVEDFGS CCCCEEEEEECEEEEECHHHEECCCCEEEECCCEEEEEECCHHHHHHHCCCCCHHHHHHH HIEKMAYFHQRWMPSEKAKSAWIDKVSQLDIEMMCPQHGGIFRGDDVPRFLDWLDKLEVG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCEECCCCCHHHHHHHHHHHHC IAV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA