| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681072
Identifier: 37681072
GI number: 37681072
Start: 2941300
End: 2941923
Strand: Direct
Name: 37681072
Synonym: VV2888
Alternate gene names: NA
Gene position: 2941300-2941923 (Clockwise)
Preceding gene: 37681071
Following gene: 37681073
Centisome position: 87.68
GC content: 43.27
Gene sequence:
>624_bases TTGAGCGAGTTAATGAGAGACACCATTGAACGAAAACCTCTATTCGTTATTGCCGCTGATGTATCAGCAGAGTTAAATCG AGGGGTAAAAATTGCGAAACAACTACAACTGGTTGCCAGTAATGCCAGAGCGCTTGCTCTAAGAGCGGGAGAAAGTGCAG CAGGATTTAGACCCGTCACGGATTCCATTGATGAGCTCGTCCTCCTGACATTTCATTCTTCAAATACCATCAATCGACAA GCTCAACAACTCAGTCAAATTGCCACAGAGCGAACTCGTGCTCAATTTGTGTTAAAGCAGTTGAATCGTGTGGAACAAAG CAGCAAAGAAGCAATATTTCTATCCAGTTTAAATCAAGCCAAACAGCGTGCTAACGAAGATTATCAACAACTCAACACCT TATTTACTCTCAAAGCTAAATCCCTAAAGGAAGCCCTTCAGGAGCTCTATGACCAACTGCGCATCGCTCAGATCATATCG ACCATGCTCAGCGTTGAAGCATCTAAAGTCGACGAGCGTTACCGAATTCAACTCAACGCTATCGCCGATAGTGTAACGGA ATTCTCTGATGCAATTCGCCATCATGTTTCACTCTCTCTTAAACTCTTTTCGCTCTTTTTGTAA
Upstream 100 bases:
>100_bases CATCTCCGTTCAATTCCTTTTTCTCGCTGCCAATTTTAGAACCTTAGGCATTGGCAAATATGCAACTCAGCTCTATACCT ATATAAGAACAAACTGTGTA
Downstream 100 bases:
>100_bases TAAGGACATTAAAAATTATGCGCTCAGAAATTCTCTATGAAGAAGGCTCCCACCGTTGGTTGATGTTTGGTAGAGATCCT CATAAGCCTGACAAAATCAT
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSELMRDTIERKPLFVIAADVSAELNRGVKIAKQLQLVASNARALALRAGESAAGFRPVTDSIDELVLLTFHSSNTINRQ AQQLSQIATERTRAQFVLKQLNRVEQSSKEAIFLSSLNQAKQRANEDYQQLNTLFTLKAKSLKEALQELYDQLRIAQIIS TMLSVEASKVDERYRIQLNAIADSVTEFSDAIRHHVSLSLKLFSLFL
Sequences:
>Translated_207_residues MSELMRDTIERKPLFVIAADVSAELNRGVKIAKQLQLVASNARALALRAGESAAGFRPVTDSIDELVLLTFHSSNTINRQ AQQLSQIATERTRAQFVLKQLNRVEQSSKEAIFLSSLNQAKQRANEDYQQLNTLFTLKAKSLKEALQELYDQLRIAQIIS TMLSVEASKVDERYRIQLNAIADSVTEFSDAIRHHVSLSLKLFSLFL >Mature_206_residues SELMRDTIERKPLFVIAADVSAELNRGVKIAKQLQLVASNARALALRAGESAAGFRPVTDSIDELVLLTFHSSNTINRQA QQLSQIATERTRAQFVLKQLNRVEQSSKEAIFLSSLNQAKQRANEDYQQLNTLFTLKAKSLKEALQELYDQLRIAQIIST MLSVEASKVDERYRIQLNAIADSVTEFSDAIRHHVSLSLKLFSLFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23292; Mature: 23161
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELMRDTIERKPLFVIAADVSAELNRGVKIAKQLQLVASNARALALRAGESAAGFRPVT CCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH DSIDELVLLTFHSSNTINRQAQQLSQIATERTRAQFVLKQLNRVEQSSKEAIFLSSLNQA HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KQRANEDYQQLNTLFTLKAKSLKEALQELYDQLRIAQIISTMLSVEASKVDERYRIQLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IADSVTEFSDAIRHHVSLSLKLFSLFL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SELMRDTIERKPLFVIAADVSAELNRGVKIAKQLQLVASNARALALRAGESAAGFRPVT CHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH DSIDELVLLTFHSSNTINRQAQQLSQIATERTRAQFVLKQLNRVEQSSKEAIFLSSLNQA HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KQRANEDYQQLNTLFTLKAKSLKEALQELYDQLRIAQIISTMLSVEASKVDERYRIQLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IADSVTEFSDAIRHHVSLSLKLFSLFL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA