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The map label for this gene is yacF [C]

Identifier: 37680967

GI number: 37680967

Start: 2838673

End: 2839413

Strand: Direct

Name: yacF [C]

Synonym: VV2783

Alternate gene names: 37680967

Gene position: 2838673-2839413 (Clockwise)

Preceding gene: 37680966

Following gene: 37680968

Centisome position: 84.62

GC content: 45.48

Gene sequence:

>741_bases
ATGACCACGCATAACTTCGAACATCCACTCAATGAAAAGACTCGCATTTATCTGAGAGTCGAATCACTGCTTAGACAGGC
ACATACTGCCGCCTCATTTTCAGAGCCGCACCAGCATCAACTCTTTTTTCGTTCTATCTTCGATCTCATCGAAATTTTTG
AACAAATTCAGTTAAAGAGCGAACTGGCGAAAGACATTGAGAAACAGCGCCTACTCTATCGCAGTTGGTTAAATGTCGAA
GGGGTTGATCAAGCGACACTGCGTTCATTACTTGATGAGGCCGATCGTACCCATGCCGCTCTTATGCAGGCACCACGTTT
TGGCCAATCATTAAAGGAAGATCGCTTCCTCAGCTCAATTCGTCAGCGATTTAGTCTTCCAGGCGGCTCTTGCTGTTTTG
ATCTTCCAGCTCTGCACTATTGGCTGAATTTGCCCATTGAGAGAAAGATCGAAGATGCACGACAGTGGTTGGATAGCCTT
AAACCGCTCTCCGACGCATTAAACTTGTGGCTAAAACTGGCACGAGAAGCGGGTCATTTCAGATCTCAAACCGCACTCAA
TGGATTTTTCCAAAGCGACGCAGAAGAAGCGAACATTCTTCGCCTTCATATTCCCATGGAGTATGGTGTCTATCCGATGA
TTTCTGGACACAAAAACCGCTTTGCGATCAAATTCATCAACTTTGAAACTGGGCAAGCCTGCAGCCAAGATGTTCATTTT
GAACTGGCAGTATGCAGTTAA

Upstream 100 bases:

>100_bases
AAGATCTTTTGCAGCAAATCACAGATTTACACCAAAAGTACCTAGCCATGAGCAAGCAAAATCGGTGAAAATAAGTCAGA
GACGACGACAGGCCCGCTAG

Downstream 100 bases:

>100_bases
CGCCCACACAGAATGAATATCGCTATTTTTAGTAAACCACTTTGTTTTACGGTTCTATCTTTATGACAAAAATAACCATA
GTTAAATGCCCTCAATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTTHNFEHPLNEKTRIYLRVESLLRQAHTAASFSEPHQHQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRLLYRSWLNVE
GVDQATLRSLLDEADRTHAALMQAPRFGQSLKEDRFLSSIRQRFSLPGGSCCFDLPALHYWLNLPIERKIEDARQWLDSL
KPLSDALNLWLKLAREAGHFRSQTALNGFFQSDAEEANILRLHIPMEYGVYPMISGHKNRFAIKFINFETGQACSQDVHF
ELAVCS

Sequences:

>Translated_246_residues
MTTHNFEHPLNEKTRIYLRVESLLRQAHTAASFSEPHQHQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRLLYRSWLNVE
GVDQATLRSLLDEADRTHAALMQAPRFGQSLKEDRFLSSIRQRFSLPGGSCCFDLPALHYWLNLPIERKIEDARQWLDSL
KPLSDALNLWLKLAREAGHFRSQTALNGFFQSDAEEANILRLHIPMEYGVYPMISGHKNRFAIKFINFETGQACSQDVHF
ELAVCS
>Mature_245_residues
TTHNFEHPLNEKTRIYLRVESLLRQAHTAASFSEPHQHQLFFRSIFDLIEIFEQIQLKSELAKDIEKQRLLYRSWLNVEG
VDQATLRSLLDEADRTHAALMQAPRFGQSLKEDRFLSSIRQRFSLPGGSCCFDLPALHYWLNLPIERKIEDARQWLDSLK
PLSDALNLWLKLAREAGHFRSQTALNGFFQSDAEEANILRLHIPMEYGVYPMISGHKNRFAIKFINFETGQACSQDVHFE
LAVCS

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family

Homologues:

Organism=Escherichia coli, GI1786291, Length=242, Percent_Identity=42.1487603305785, Blast_Score=217, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1620_VIBVU (P67695)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760512.1
- ProteinModelPortal:   P67695
- SMR:   P67695
- GeneID:   1178536
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1620
- HOGENOM:   HBG432810
- OMA:   CYPTISG
- ProtClustDB:   PRK05287
- BioCyc:   VVUL216895:VV1_1620-MONOMER
- HAMAP:   MF_01092
- InterPro:   IPR009777

Pfam domain/function: PF07072 DUF1342

EC number: NA

Molecular weight: Translated: 28589; Mature: 28458

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHNFEHPLNEKTRIYLRVESLLRQAHTAASFSEPHQHQLFFRSIFDLIEIFEQIQLKS
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELAKDIEKQRLLYRSWLNVEGVDQATLRSLLDEADRTHAALMQAPRFGQSLKEDRFLSSI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RQRFSLPGGSCCFDLPALHYWLNLPIERKIEDARQWLDSLKPLSDALNLWLKLAREAGHF
HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSQTALNGFFQSDAEEANILRLHIPMEYGVYPMISGHKNRFAIKFINFETGQACSQDVHF
HHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE
ELAVCS
EEEECC
>Mature Secondary Structure 
TTHNFEHPLNEKTRIYLRVESLLRQAHTAASFSEPHQHQLFFRSIFDLIEIFEQIQLKS
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELAKDIEKQRLLYRSWLNVEGVDQATLRSLLDEADRTHAALMQAPRFGQSLKEDRFLSSI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RQRFSLPGGSCCFDLPALHYWLNLPIERKIEDARQWLDSLKPLSDALNLWLKLAREAGHF
HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSQTALNGFFQSDAEEANILRLHIPMEYGVYPMISGHKNRFAIKFINFETGQACSQDVHF
HHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE
ELAVCS
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA