| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is can [H]
Identifier: 37680952
GI number: 37680952
Start: 2821886
End: 2822596
Strand: Direct
Name: can [H]
Synonym: VV2768
Alternate gene names: 37680952
Gene position: 2821886-2822596 (Clockwise)
Preceding gene: 37680948
Following gene: 37680954
Centisome position: 84.12
GC content: 45.71
Gene sequence:
>711_bases GTGTATAGTGATGCAAGAATTTTTAGGGAAGTAAGACGCAACATGCCGGAAATCAAGCAATTATTTGAAAACAACTCAAA ATGGTCCGAAGAGATCAAATCGCATCAACCGGAGTATTTTTCCAAGTTAGAAGAAGGGCAAAACCCCGGCTTTCTCTGGA TTGGGTGTTCCGACAGTCGCGTTCCTGCAGAGCGCTTGACTGGGCTTTATTCGGGTGAACTATTTGTTCACCGTAATGTG GCAAACCAAGTGATCCATACCGATTTAAACTGCCTCTCGGTTGTGCAATACGCCGTCGACGTGTTGAAAGTTAAACACAT CATCATCTGTGGTCATTACGGCTGTGGAGGGGTGAACGCTGCGATTGAAAATCCGCGCCTTGGTTTGATCAATAACTGGC TACTGCACATCCGCGATCTCTACCTCAAACATCGCAATTGGTTAGGTGAACTACCAAAAGAAAAATGGGGCGACAAACTG TGTGAAATTAACGTCGCAGAGCAGGTCTACAACTTAGGTAATTCTACTATTATGGAAAGCGCTTGGGAGCGTGGACAAGA TGTGGAAATTCACGGCGTTGTCTATGGCATTGGTGATGGCCGCCTACAAGACATTGGCGTACGTTGCTACAGCAGAGAGT CACTCGAAGTCAACTATCAGGCTGCAATGGCAAAAATCCTCAATAGCGATGTGATGAAGTTTCACGAATAG
Upstream 100 bases:
>100_bases TTGTGGTTTGGTTAACGGCTAAGTTTATGATTTTTTATGCCATAACTAGTCAGATGAGTACTTTTCTGCCAATTTATTTC GGGCGGTAAATTGTAACATT
Downstream 100 bases:
>100_bases CGCCATCGTTAGACCGCCGACACAATCCGTGTTCTAGAGATAAAAATGCAATGGCCCGCTGTATCAGCGGGCCATTATTA TTTATGAGTACCACTTACTC
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MYSDARIFREVRRNMPEIKQLFENNSKWSEEIKSHQPEYFSKLEEGQNPGFLWIGCSDSRVPAERLTGLYSGELFVHRNV ANQVIHTDLNCLSVVQYAVDVLKVKHIIICGHYGCGGVNAAIENPRLGLINNWLLHIRDLYLKHRNWLGELPKEKWGDKL CEINVAEQVYNLGNSTIMESAWERGQDVEIHGVVYGIGDGRLQDIGVRCYSRESLEVNYQAAMAKILNSDVMKFHE
Sequences:
>Translated_236_residues MYSDARIFREVRRNMPEIKQLFENNSKWSEEIKSHQPEYFSKLEEGQNPGFLWIGCSDSRVPAERLTGLYSGELFVHRNV ANQVIHTDLNCLSVVQYAVDVLKVKHIIICGHYGCGGVNAAIENPRLGLINNWLLHIRDLYLKHRNWLGELPKEKWGDKL CEINVAEQVYNLGNSTIMESAWERGQDVEIHGVVYGIGDGRLQDIGVRCYSRESLEVNYQAAMAKILNSDVMKFHE >Mature_236_residues MYSDARIFREVRRNMPEIKQLFENNSKWSEEIKSHQPEYFSKLEEGQNPGFLWIGCSDSRVPAERLTGLYSGELFVHRNV ANQVIHTDLNCLSVVQYAVDVLKVKHIIICGHYGCGGVNAAIENPRLGLINNWLLHIRDLYLKHRNWLGELPKEKWGDKL CEINVAEQVYNLGNSTIMESAWERGQDVEIHGVVYGIGDGRLQDIGVRCYSRESLEVNYQAAMAKILNSDVMKFHE
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=212, Percent_Identity=66.5094339622642, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI1786534, Length=192, Percent_Identity=29.6875, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324292, Length=199, Percent_Identity=30.1507537688442, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 27107; Mature: 27107
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSDARIFREVRRNMPEIKQLFENNSKWSEEIKSHQPEYFSKLEEGQNPGFLWIGCSDSR CCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCC VPAERLTGLYSGELFVHRNVANQVIHTDLNCLSVVQYAVDVLKVKHIIICGHYGCGGVNA CCHHHHHHHHCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC AIENPRLGLINNWLLHIRDLYLKHRNWLGELPKEKWGDKLCEINVAEQVYNLGNSTIMES CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEHHHHHHHHCCCHHHHHH AWERGQDVEIHGVVYGIGDGRLQDIGVRCYSRESLEVNYQAAMAKILNSDVMKFHE HHHCCCCEEEEEEEEECCCCCCHHHCCEEECCCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYSDARIFREVRRNMPEIKQLFENNSKWSEEIKSHQPEYFSKLEEGQNPGFLWIGCSDSR CCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCC VPAERLTGLYSGELFVHRNVANQVIHTDLNCLSVVQYAVDVLKVKHIIICGHYGCGGVNA CCHHHHHHHHCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC AIENPRLGLINNWLLHIRDLYLKHRNWLGELPKEKWGDKLCEINVAEQVYNLGNSTIMES CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEEHHHHHHHHCCCHHHHHH AWERGQDVEIHGVVYGIGDGRLQDIGVRCYSRESLEVNYQAAMAKILNSDVMKFHE HHHCCCCEEEEEEEEECCCCCCHHHCCEEECCCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]