| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is glxK [H]
Identifier: 37680936
GI number: 37680936
Start: 2800783
End: 2801919
Strand: Direct
Name: glxK [H]
Synonym: VV2752
Alternate gene names: 37680936
Gene position: 2800783-2801919 (Clockwise)
Preceding gene: 37680935
Following gene: 37680940
Centisome position: 83.49
GC content: 53.3
Gene sequence:
>1137_bases ATGAAAATTATAATTGCTCCAGATTCCTATAAAGAAAGCCTTACTGCCATGGATGTGGCCATCGCGATTGAAAAAGGATT TAAGCAAGTCTTACCTGATGCACACTACGTGAAGCTCCCTATGGCAGATGGTGGAGAAGGCACAGTGCAATCGATGGTTG ACGCCACTGGTGGCACCATCATCGAACATACCGTTACGGGCCCACTTGGCCAGCGTGTCGATGGCTTTTTTGGCTTGCTC GGCGAAGGCAAAACCGCAGTCATCGAGATGGCGGCGGCTTCTGGCTTGCACCTTGTGACACCAGATCAGCGCAACCCACT CATCACCACAACGTTTGGTACGGGCGAGTTGATCAAAGCCGCCCTCGACCACGGTGTGGAACACATTATTGTTGGCATCG GTGGCAGTGCGACCAACGATGGTGGCATTGGTATGGCGCAGGCTCTCGGCATCAAACTACTTGATGCACAAGGGAACGCG CTTGGTTATGGTGGCGGTGAGCTAGCGAAATTGGCAACGATTGACTGCTCTCAACTCGATCCTCGTTTGGCTCAAGTTCG TCTTGAAGTGGCGTGTGATGTTGATAACCCACTATGTGGTACAAAAGGCGCTTCCGCTGTCTTTGGGCCACAAAAAGGGG CAACGCCAGAGATGGTCACAATTTTGGACAAAAACTTAGCGCACTATGCCACGATCATTAAACAGCAACTTGACGTGGAT GTTCGTGATATGGCCGGTGCAGGCGCTGCGGGCGGCATGGGTGCGGCGCTGCTAGGCTTGCTCAATGCCGAGCTTCGTCC TGGTATTGAGATTGTCATGGACGCGGTTCACTTAGATGAAATCGTTGCGGATGCGGATCTGGTGATCACCGGAGAAGGTC GTATCGACAGCCAAACCATTCATGGCAAAACCCCGATCGGTGTCGCACGCACAGCGAAAAAGCACGGCTTGCCGGTGATT GGCATCGCGGGTTGTCTGTCGGCCGATTGCGGAGTGGTCCATGAACATGGCCTCGATGCCGTCTTTGCCGTGGTCAATCG TTCCGTTGATCTGCCAACCGCGTTAGCAGAAGCGGCAGAGAACGTGGAGCTAACAGCAAGAAACGTTGCCGCTGCTTTTT GTATGACTCGCCGTTAA
Upstream 100 bases:
>100_bases AACTGATTCCTTATGAGTCTGCGGTTGGCTTAATGATCGCTTTTGTCTCTGTCATGATGTTCGGCGTATTTGGTCTGTTT GTATAAGCATTGAGGTAAAC
Downstream 100 bases:
>100_bases GCTTTGTTTAACGTAAAAAAACCGCTGAAAATTCAGCGGTTTTTTATTATCAACGATTTTACTAAGCCGGCTGTTGGAAA ATCACTGTATCGGCTTTTTT
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKIIIAPDSYKESLTAMDVAIAIEKGFKQVLPDAHYVKLPMADGGEGTVQSMVDATGGTIIEHTVTGPLGQRVDGFFGLL GEGKTAVIEMAAASGLHLVTPDQRNPLITTTFGTGELIKAALDHGVEHIIVGIGGSATNDGGIGMAQALGIKLLDAQGNA LGYGGGELAKLATIDCSQLDPRLAQVRLEVACDVDNPLCGTKGASAVFGPQKGATPEMVTILDKNLAHYATIIKQQLDVD VRDMAGAGAAGGMGAALLGLLNAELRPGIEIVMDAVHLDEIVADADLVITGEGRIDSQTIHGKTPIGVARTAKKHGLPVI GIAGCLSADCGVVHEHGLDAVFAVVNRSVDLPTALAEAAENVELTARNVAAAFCMTRR
Sequences:
>Translated_378_residues MKIIIAPDSYKESLTAMDVAIAIEKGFKQVLPDAHYVKLPMADGGEGTVQSMVDATGGTIIEHTVTGPLGQRVDGFFGLL GEGKTAVIEMAAASGLHLVTPDQRNPLITTTFGTGELIKAALDHGVEHIIVGIGGSATNDGGIGMAQALGIKLLDAQGNA LGYGGGELAKLATIDCSQLDPRLAQVRLEVACDVDNPLCGTKGASAVFGPQKGATPEMVTILDKNLAHYATIIKQQLDVD VRDMAGAGAAGGMGAALLGLLNAELRPGIEIVMDAVHLDEIVADADLVITGEGRIDSQTIHGKTPIGVARTAKKHGLPVI GIAGCLSADCGVVHEHGLDAVFAVVNRSVDLPTALAEAAENVELTARNVAAAFCMTRR >Mature_378_residues MKIIIAPDSYKESLTAMDVAIAIEKGFKQVLPDAHYVKLPMADGGEGTVQSMVDATGGTIIEHTVTGPLGQRVDGFFGLL GEGKTAVIEMAAASGLHLVTPDQRNPLITTTFGTGELIKAALDHGVEHIIVGIGGSATNDGGIGMAQALGIKLLDAQGNA LGYGGGELAKLATIDCSQLDPRLAQVRLEVACDVDNPLCGTKGASAVFGPQKGATPEMVTILDKNLAHYATIIKQQLDVD VRDMAGAGAAGGMGAALLGLLNAELRPGIEIVMDAVHLDEIVADADLVITGEGRIDSQTIHGKTPIGVARTAKKHGLPVI GIAGCLSADCGVVHEHGLDAVFAVVNRSVDLPTALAEAAENVELTARNVAAAFCMTRR
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=378, Percent_Identity=60.5820105820106, Blast_Score=420, Evalue=1e-119, Organism=Escherichia coli, GI1786724, Length=373, Percent_Identity=59.2493297587131, Blast_Score=417, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38856; Mature: 38856
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIAPDSYKESLTAMDVAIAIEKGFKQVLPDAHYVKLPMADGGEGTVQSMVDATGGTI CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEE IEHTVTGPLGQRVDGFFGLLGEGKTAVIEMAAASGLHLVTPDQRNPLITTTFGTGELIKA EEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCHHHHHH ALDHGVEHIIVGIGGSATNDGGIGMAQALGIKLLDAQGNALGYGGGELAKLATIDCSQLD HHHCCCEEEEEECCCCCCCCCCCCHHHHHCEEEEECCCCEEECCCCCEEEEEECCHHHCC PRLAQVRLEVACDVDNPLCGTKGASAVFGPQKGATPEMVTILDKNLAHYATIIKQQLDVD CHHHHEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VRDMAGAGAAGGMGAALLGLLNAELRPGIEIVMDAVHLDEIVADADLVITGEGRIDSQTI HHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE HGKTPIGVARTAKKHGLPVIGIAGCLSADCGVVHEHGLDAVFAVVNRSVDLPTALAEAAE CCCCCCCHHHHHHHHCCCEEEEHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHC NVELTARNVAAAFCMTRR CCEEEHHHHHHHHHHCCC >Mature Secondary Structure MKIIIAPDSYKESLTAMDVAIAIEKGFKQVLPDAHYVKLPMADGGEGTVQSMVDATGGTI CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEE IEHTVTGPLGQRVDGFFGLLGEGKTAVIEMAAASGLHLVTPDQRNPLITTTFGTGELIKA EEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCHHHHHH ALDHGVEHIIVGIGGSATNDGGIGMAQALGIKLLDAQGNALGYGGGELAKLATIDCSQLD HHHCCCEEEEEECCCCCCCCCCCCHHHHHCEEEEECCCCEEECCCCCEEEEEECCHHHCC PRLAQVRLEVACDVDNPLCGTKGASAVFGPQKGATPEMVTILDKNLAHYATIIKQQLDVD CHHHHEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC VRDMAGAGAAGGMGAALLGLLNAELRPGIEIVMDAVHLDEIVADADLVITGEGRIDSQTI HHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE HGKTPIGVARTAKKHGLPVIGIAGCLSADCGVVHEHGLDAVFAVVNRSVDLPTALAEAAE CCCCCCCHHHHHHHHCCCEEEEHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHC NVELTARNVAAAFCMTRR CCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]