| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is gntP [C]
Identifier: 37680935
GI number: 37680935
Start: 2799503
End: 2800768
Strand: Direct
Name: gntP [C]
Synonym: VV2751
Alternate gene names: 37680935
Gene position: 2799503-2800768 (Clockwise)
Preceding gene: 37680934
Following gene: 37680936
Centisome position: 83.46
GC content: 51.9
Gene sequence:
>1266_bases ATGATTGAAGTCTCTACCCTCGGAGCCTTAGCTGCCTTAGTGGTGGCCATTGCGCTCATACTGAAAAAAGTCCCACCCGC GTACGGCATGATCATTGGCGCTCTTATCGGCGGTGTGATTGGTGGTGTTTCACTGACCGACACAGTTTCTCTAATGATCG GCGGCGCACAAGGTATTGTGACCGCGGTTTTACGTATTCTTGCCGCCGGTGTTTTGGCTGGCGTTTTGATTGAATCTGGC GCAGCAACATCGATCGCAGAGACGATCGTCAAAAAAGTGGGGGAAACACGCGCGCTTCTCGCCCTGGCATTGGCGACCAT GATTCTGACTGCCGTTGGCGTTTTTGTTGATGTCGCCGTCATTACGGTTTCTCCGATTGCGTTGGCGATTGCTCGCCGTG CTGATATCTCTAAAACCGCGATTTTGCTTGCCATGGTCGGGGGCGGTAAAGCCGGTAACGTAATGTCGCCAAATCCCAAT GCAATCGCAGCCGCTGATGCCTTTAATGTGCCATTAACCTCTGTGATGGCAGCTGGTGTCATTCCTGGTCTTTGTGGTTT GGTATTGGCGTATTTCATTGCGAAACGTCTGGTCAATAAGGGGTCTAAAGTCGCGGCCAGCGAAGTCATTGCAGTGGATC ACAGCAAACTGCCAAAATTTGGCGCTGCCATTGTCGCGCCATTGGTGGCAATTGCACTATTGGCTTTGCGCCCAATTGCC GGCATCAACGTTGATCCGCTCATCGCCTTGCCTTTAGGCGGTTTGCTCGGTGCCGTGGTGATGGGTCGATTCGCCGATAC CAACCACTTTGCAGTCTCTGGCCTCTCGCGCATGGCACCGGTTGCCGTCATGCTGCTTGGCACAGGTACTCTCGCAGGTA TTATCGCGAACTCAGGGCTTAAAAATGGCTTGATCGATATTCTCACCGCTTCGGGTTTACCGTCCTATCTCCTTGCCCCG ATTTCCGGTGCAATGATGTCACTTGCAACAGCATCCACCACAGCAGGAACCGCCGTTGCATCTAACGTATTTAGTCACAC CATTCTTGAACTGGGAGTACCTGCATTAGCCGGGGCAGCCATGATTCATTCTGGTGCCACTGTTCTTGACCATATGCCAC ATGGTAGCTTCTTCCACGCAACGGGCGGCGCTGTTCATATGGACATTCGTGAGCGTTTAAAACTGATTCCTTATGAGTCT GCGGTTGGCTTAATGATCGCTTTTGTCTCTGTCATGATGTTCGGCGTATTTGGTCTGTTTGTATAA
Upstream 100 bases:
>100_bases GTCAGCTGGGTGAAATTTGTTGTAACGGCTAAAGACCCGATCAGATTCCATCTCTATATTCGAGCAAAAAATACTCTTAT CAATAATATGGAAATGGAAC
Downstream 100 bases:
>100_bases GCATTGAGGTAAACATGAAAATTATAATTGCTCCAGATTCCTATAAAGAAAGCCTTACTGCCATGGATGTGGCCATCGCG ATTGAAAAAGGATTTAAGCA
Product: H+/gluconate symporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MIEVSTLGALAALVVAIALILKKVPPAYGMIIGALIGGVIGGVSLTDTVSLMIGGAQGIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALALATMILTAVGVFVDVAVITVSPIALAIARRADISKTAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLCGLVLAYFIAKRLVNKGSKVAASEVIAVDHSKLPKFGAAIVAPLVAIALLALRPIA GINVDPLIALPLGGLLGAVVMGRFADTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKNGLIDILTASGLPSYLLAP ISGAMMSLATASTTAGTAVASNVFSHTILELGVPALAGAAMIHSGATVLDHMPHGSFFHATGGAVHMDIRERLKLIPYES AVGLMIAFVSVMMFGVFGLFV
Sequences:
>Translated_421_residues MIEVSTLGALAALVVAIALILKKVPPAYGMIIGALIGGVIGGVSLTDTVSLMIGGAQGIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALALATMILTAVGVFVDVAVITVSPIALAIARRADISKTAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLCGLVLAYFIAKRLVNKGSKVAASEVIAVDHSKLPKFGAAIVAPLVAIALLALRPIA GINVDPLIALPLGGLLGAVVMGRFADTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKNGLIDILTASGLPSYLLAP ISGAMMSLATASTTAGTAVASNVFSHTILELGVPALAGAAMIHSGATVLDHMPHGSFFHATGGAVHMDIRERLKLIPYES AVGLMIAFVSVMMFGVFGLFV >Mature_421_residues MIEVSTLGALAALVVAIALILKKVPPAYGMIIGALIGGVIGGVSLTDTVSLMIGGAQGIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALALATMILTAVGVFVDVAVITVSPIALAIARRADISKTAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLCGLVLAYFIAKRLVNKGSKVAASEVIAVDHSKLPKFGAAIVAPLVAIALLALRPIA GINVDPLIALPLGGLLGAVVMGRFADTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKNGLIDILTASGLPSYLLAP ISGAMMSLATASTTAGTAVASNVFSHTILELGVPALAGAAMIHSGATVLDHMPHGSFFHATGGAVHMDIRERLKLIPYES AVGLMIAFVSVMMFGVFGLFV
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42034; Mature: 42034
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVSTLGALAALVVAIALILKKVPPAYGMIIGALIGGVIGGVSLTDTVSLMIGGAQGIV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALALATMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALAIARRADISKTAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV HHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH IPGLCGLVLAYFIAKRLVNKGSKVAASEVIAVDHSKLPKFGAAIVAPLVAIALLALRPIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCC GINVDPLIALPLGGLLGAVVMGRFADTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC KNGLIDILTASGLPSYLLAPISGAMMSLATASTTAGTAVASNVFSHTILELGVPALAGAA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MIHSGATVLDHMPHGSFFHATGGAVHMDIRERLKLIPYESAVGLMIAFVSVMMFGVFGLF HHHCCCHHHHCCCCCCEEECCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure MIEVSTLGALAALVVAIALILKKVPPAYGMIIGALIGGVIGGVSLTDTVSLMIGGAQGIV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALALATMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALAIARRADISKTAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV HHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH IPGLCGLVLAYFIAKRLVNKGSKVAASEVIAVDHSKLPKFGAAIVAPLVAIALLALRPIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCC GINVDPLIALPLGGLLGAVVMGRFADTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC KNGLIDILTASGLPSYLLAPISGAMMSLATASTTAGTAVASNVFSHTILELGVPALAGAA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH MIHSGATVLDHMPHGSFFHATGGAVHMDIRERLKLIPYESAVGLMIAFVSVMMFGVFGLF HHHCCCHHHHCCCCCCEEECCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]