| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37680027
Identifier: 37680027
GI number: 37680027
Start: 1862000
End: 1862362
Strand: Direct
Name: 37680027
Synonym: VV1843
Alternate gene names: NA
Gene position: 1862000-1862362 (Clockwise)
Preceding gene: 37680024
Following gene: 37680038
Centisome position: 55.51
GC content: 42.42
Gene sequence:
>363_bases ATGATTACTATTGATTCTGTCGTGCTTTACGTCGAGAACATTCAAATTAGCCAAGAGTTTTACGAAAAGATACTATCCTG CAAGGCTGAGGCACTTTCGCCTACTTTTGTCTCGTTTAAATTGCCAGATGGCCCACTATTAGAACTAAAGCAACTTGCTC ACTGCAATCCGAGTTCAAGCACTACTGGCGGCGGCACAGAAATTTCAATTTTGATTAAAAACCGAGATGCCCTGCATTGC TTGTTCCAAAACTGGAGTCACAACGGTATTCAGTTCCTGTTGGAGCCAATCGAGCAAATTTACGGCATAACATTTGTTGC GATTGATCCCGACAACCATAGAATTCGCGTATTTGCCGAGTAA
Upstream 100 bases:
>100_bases CTTTAACGCCTTGTTATGTGTTTGTTCTACACGCTACTGACAATTTCTGACTCGAGAAAAGTATAGAGTAATCATCACAT TGAACAGTAAGGGATATACC
Downstream 100 bases:
>100_bases ACACATAACGCTGCGTTAAGGGGTGAATGCCGCATAAACCAACTTTCCGTAGAACACCTTCACTACCAAAACTCACCGCA TACCAAAAATGCCGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Ehpr Protein; Glyoxalase Protein; Phenazine Antibiotic Biosynthesis Protein
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MITIDSVVLYVENIQISQEFYEKILSCKAEALSPTFVSFKLPDGPLLELKQLAHCNPSSSTTGGGTEISILIKNRDALHC LFQNWSHNGIQFLLEPIEQIYGITFVAIDPDNHRIRVFAE
Sequences:
>Translated_120_residues MITIDSVVLYVENIQISQEFYEKILSCKAEALSPTFVSFKLPDGPLLELKQLAHCNPSSSTTGGGTEISILIKNRDALHC LFQNWSHNGIQFLLEPIEQIYGITFVAIDPDNHRIRVFAE >Mature_120_residues MITIDSVVLYVENIQISQEFYEKILSCKAEALSPTFVSFKLPDGPLLELKQLAHCNPSSSTTGGGTEISILIKNRDALHC LFQNWSHNGIQFLLEPIEQIYGITFVAIDPDNHRIRVFAE
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13493; Mature: 13493
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIDSVVLYVENIQISQEFYEKILSCKAEALSPTFVSFKLPDGPLLELKQLAHCNPSSS CEEEEEEEEEEECCEECHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC TTGGGTEISILIKNRDALHCLFQNWSHNGIQFLLEPIEQIYGITFVAIDPDNHRIRVFAE CCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECCCCCEEEEEEC >Mature Secondary Structure MITIDSVVLYVENIQISQEFYEKILSCKAEALSPTFVSFKLPDGPLLELKQLAHCNPSSS CEEEEEEEEEEECCEECHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC TTGGGTEISILIKNRDALHCLFQNWSHNGIQFLLEPIEQIYGITFVAIDPDNHRIRVFAE CCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA