| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679897
Identifier: 37679897
GI number: 37679897
Start: 1769892
End: 1770710
Strand: Direct
Name: 37679897
Synonym: VV1713
Alternate gene names: NA
Gene position: 1769892-1770710 (Clockwise)
Preceding gene: 37679894
Following gene: 37679898
Centisome position: 52.76
GC content: 48.84
Gene sequence:
>819_bases ATGAACAAAGTAGCTCTTACTTTGGCGGCAACGTCGATTACGCTGGTGAGTTTCTCCTCTTTCTCTGCCGATGATGTTCA CCGTGTGCGTTTGGCAACCACGACCAGTACTTATCACTCTGGCCTGCTTGATTACCTACTGCCTGAATTCGAAAAAGACA CCGGTTATAAAGTGGATGTGCTGGCCGCAGGGACAGGTAAATCACTGAAAATGGGTGAAAATGGCGATGTGGATTTGGTG ATGACGCATGCTCCGAAAGCCGAAGCGACCTTTGTCGAAAAAGGCTACGGTGTGTTACCTCGCAAGCTAATGTACAACGA CTTTATCGTCGTGGGACCAAAAGCAGATCCGGCGAAAGTTGCTCAAGACAACAGCGTACTTGAGGTGTTTAAAGCCATCG CGGACAACAATGTCACCTTTATCTCACGTGGCGATGATTCGGGTACGCACAAGAAAGAACTGGGTATTTGGGCTCAAACC AAGATGGAACCCAACTTCGGCGGCTATCGCTCAGTGGGTCAAGGTATGGGGCCAACGCTGAACATGGCGTCAGAAATGCA AGGTTACACGTTAACAGACCGTGGCACTTGGCTGGCTTACAACAACAAGTTGGATCTTGCGGTACTGTTCGAAGGTGATC AAAAACTCTTCAACCCGTACCAAGTGATTTTGGTCAATCCAGAGCGCTACCCGAGCATCAATTATCAGGGCGCCAAAGCA TTCAGTGACTGGTTGGTCAATCCTCGTGGACAAGAGCTGATCAACAGCTTCCGCTTAAATGGCAAGCAACTGTTTGTGGC AAATGCAGATCAGAAGTAG
Upstream 100 bases:
>100_bases GCCGATGAGGTTTGACCGAGTGGTGACGCGGTTTGTGTGTCTGTGTGCTTAACTGCAACGGCCTATTTGCCCAAGAATGA TTTGAAGGAATAAAAATACA
Downstream 100 bases:
>100_bases TCATCAATGAGCCTTTGGCAAACAACACAAGAGGCTTTTGCCTTACTGTTTAGCTTAGACAAAGAACTATGGGAGATCGT TGCGGTCTCCTTTAGCGTTT
Product: ABC-type tungstate transport system, permease component
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNKVALTLAATSITLVSFSSFSADDVHRVRLATTTSTYHSGLLDYLLPEFEKDTGYKVDVLAAGTGKSLKMGENGDVDLV MTHAPKAEATFVEKGYGVLPRKLMYNDFIVVGPKADPAKVAQDNSVLEVFKAIADNNVTFISRGDDSGTHKKELGIWAQT KMEPNFGGYRSVGQGMGPTLNMASEMQGYTLTDRGTWLAYNNKLDLAVLFEGDQKLFNPYQVILVNPERYPSINYQGAKA FSDWLVNPRGQELINSFRLNGKQLFVANADQK
Sequences:
>Translated_272_residues MNKVALTLAATSITLVSFSSFSADDVHRVRLATTTSTYHSGLLDYLLPEFEKDTGYKVDVLAAGTGKSLKMGENGDVDLV MTHAPKAEATFVEKGYGVLPRKLMYNDFIVVGPKADPAKVAQDNSVLEVFKAIADNNVTFISRGDDSGTHKKELGIWAQT KMEPNFGGYRSVGQGMGPTLNMASEMQGYTLTDRGTWLAYNNKLDLAVLFEGDQKLFNPYQVILVNPERYPSINYQGAKA FSDWLVNPRGQELINSFRLNGKQLFVANADQK >Mature_272_residues MNKVALTLAATSITLVSFSSFSADDVHRVRLATTTSTYHSGLLDYLLPEFEKDTGYKVDVLAAGTGKSLKMGENGDVDLV MTHAPKAEATFVEKGYGVLPRKLMYNDFIVVGPKADPAKVAQDNSVLEVFKAIADNNVTFISRGDDSGTHKKELGIWAQT KMEPNFGGYRSVGQGMGPTLNMASEMQGYTLTDRGTWLAYNNKLDLAVLFEGDQKLFNPYQVILVNPERYPSINYQGAKA FSDWLVNPRGQELINSFRLNGKQLFVANADQK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29936; Mature: 29936
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVALTLAATSITLVSFSSFSADDVHRVRLATTTSTYHSGLLDYLLPEFEKDTGYKVDV CCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEE LAAGTGKSLKMGENGDVDLVMTHAPKAEATFVEKGYGVLPRKLMYNDFIVVGPKADPAKV EEECCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHCCEEEECCCCCHHHH AQDNSVLEVFKAIADNNVTFISRGDDSGTHKKELGIWAQTKMEPNFGGYRSVGQGMGPTL CCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEEECCCCCCCHHHHCCCCCCCC NMASEMQGYTLTDRGTWLAYNNKLDLAVLFEGDQKLFNPYQVILVNPERYPSINYQGAKA CHHHHCCCEEEECCCEEEEECCCEEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCCHH FSDWLVNPRGQELINSFRLNGKQLFVANADQK HHHHCCCCCHHHHHHHHCCCCEEEEEEECCCC >Mature Secondary Structure MNKVALTLAATSITLVSFSSFSADDVHRVRLATTTSTYHSGLLDYLLPEFEKDTGYKVDV CCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEE LAAGTGKSLKMGENGDVDLVMTHAPKAEATFVEKGYGVLPRKLMYNDFIVVGPKADPAKV EEECCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCHHHHHCCEEEECCCCCHHHH AQDNSVLEVFKAIADNNVTFISRGDDSGTHKKELGIWAQTKMEPNFGGYRSVGQGMGPTL CCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEEECCCCCCCHHHHCCCCCCCC NMASEMQGYTLTDRGTWLAYNNKLDLAVLFEGDQKLFNPYQVILVNPERYPSINYQGAKA CHHHHCCCEEEECCCEEEEECCCEEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCCCHH FSDWLVNPRGQELINSFRLNGKQLFVANADQK HHHHCCCCCHHHHHHHHCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA