| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679893
Identifier: 37679893
GI number: 37679893
Start: 1762784
End: 1765129
Strand: Direct
Name: 37679893
Synonym: VV1709
Alternate gene names: NA
Gene position: 1762784-1765129 (Clockwise)
Preceding gene: 37679891
Following gene: 37679894
Centisome position: 52.55
GC content: 48.34
Gene sequence:
>2346_bases ATGCAAAAATTATTACGTCTATTCGTTTGTTTTACTCTGGTGTTTGCGCCAGCAACGTTTGCCCAATGGCAGTATGCAGC ACAGACGCCAGCTCAGGTTAGTGCGCAGGCATTGAGTATCGAAAGTGACTTAAGTGCTCTGCCCGATCCTCTTTTTATGG GTCCCAAGGAACACATCAAGGTAAATCAGTTGCTCTCCGCCGTGCTCGAATTACAAAAAACGGAGGGCGATGCTTTTAAA GCAGCGTTAGCCCAGTATCGTAAAGCCCCCACTGCGCCACAATGGTTGTTGGTCGAGAATCAATATCTCACGCTAAACAG CCTTGGCAGTAGTAAAGCGCGCTTACTCCAACTTACGGATACGGCTAGTAGAGAGCAGCTTACCGGCTTTGGCCCTTATG GTGTGACTCAGTTTCGCCAAGAGCTTGCGCTGACCAAACTTAACATTGAATACCTGGTCCATTTCCAGCTACGCAGTTTC CGTGCTCTGATTAAGAACACATTTATTTCACCTGTACCGGTGATCTGGACGGGGCTAAAAGTGTTTGCAGTCTACTTACT TTTGGTTTGGTGGATGGCCAATAGTAAACGCATCATTACACTCTTTCGCGAAAGCCAACTTGAAACCAATACGGCACCAC CATTATGGGTTAAGTTTATTTGGTACATAAGCCGAGCCAATAAAGCCATAGCTTGGTTGATCGCGATTACCGTGTCGCTG CGTATTCTCGCCTCACTGCCAAGTTTGCAACATCTGGTGTATCTAGAGATCTTCACCTGGTGGATCTTGGGCGGTTCCAT CGCCATTAGCTTTATTCTTGAATTTGCTTATCGCAATAGCCGCAGTTCCAGTAAAGACGTGGTGGCGCTTCGCCTCGCCA CGATTCGACGTTATGTGTGGAGTGCGATTGTTGCTGGCGTGATTTTACAAATCTCCGTTCGTACTCTTGGTAAAGGGACC ATTTACTATTGGATCTACAGCGCACTGTACTTCTGGTTCGTGCTGGTCACTGTATCCGTTTTGCGTCTGTGGCGTAAAAA AGTGTTTGAAGTGGTTGATCGCATCACGGAGCGTCCAGTCTGGGTACAGTGGGCAATCAAACGCCAAGATAGCTTTATTC TCAATATTCCAGCAACCGCAATAGCGGCGGTATGGCTGATTAGCCATCACTTTAAACATCGCATTATTGCGACTCTCTCA AACTACACCATGTTCAGTCAGGCACTGGCTTACCTCTTCCGTATCGAAGTGGCTAAGCAAACCAGCAACCGAGACGGCAA CGACTCACTGGTGCGCATTCGTGGTGATGCGGCATTTCAATATGTGTTGCCTCCGCAGCAAGACAGCGAGTGGATTGACT ACGCCAGTGACGAAATTCAAAACCTCTCTCGCTATTTGTTGACCGATAGCCCTGCGATTTGTGTGTTGTCAGGTGAGCGT GGTGTGGGTACCACATCGGTATTGAAGAAAATACTTGGCAAAGTGAAAAACGCCACGCCGCTTTACCTTAACTGCCCTTA CGATGGTTACCCAGAGCTGTTGAAACAGTTGGCGACAGGATTAGGGTTGGCAGAAGAGTCGACAGAAGTGCAAATTTTAG CGTTCTTGCGTAAAAGTGAAACGCCGTATCTCATCGCAGTTGATAACGCACAACGTTTGGTGAAGCCCATGGTTGGTGGT TTAGCTGGACTGATGAAGCTGACGAACCTGCTGCGCCGCTCTAAACAAAATCACCGTGTTGTGATGGCGATTGAGAAAGC AAGTTGGCGTTTTGTCGATCGCGCTCGTGGCGAGCGACTGCTGTTTGATTGGGTCTCCTTTTTGCCTCGTTGGAATGAAA AGCAGATCTCTGCCTTACTCGATAGCCGCGTAAATCAGGATATTGAAAATCCGCTGAGCTTTGATGGCCTTGTGGTGCCT AAGCAGTGGGATCAAGAAGAGACTTCTGAGGAAGAACGAGCCAAACAAGGCTTCTACCGAATTTTGTGGCACTACTCCGA TGGTAACCCAACAGTGGCGCTGCGATTCTTCCGCTTGTCGTTAAGACGCAATAAAGAGTCTGATAGTGTCGTGGTGCGCT TGTTCCATGCGCCGGAATCCAAAGAGTTGGAGCAGATGCCTAAACCGATGCTGGCGGTGTTACGTTCAATTGTACAGCTT GAAGTGGCCTCTCCCGAAGAGCTCTCCGAGTGTACTCAGCTCAGCATCGCTGAAGTGATTGGTACACTTCGTTTCTTTGA AAGCCGTGGCTTTATTGCTTGGAATGAGGATAAAGCTCGCGTCTCGGACCATTGGTTCCGCTACATTACCAACGTTCTCG ATCGTCAACATTTGCTGGTGAAGTAA
Upstream 100 bases:
>100_bases AATATGGATAAAGTTTCACAGCAAATTTCTATTTGTCTGAATTATGAACAGTTTTTGAGACTACAATCTCTTTGTTACGT CTAAATAATACGACCCACTT
Downstream 100 bases:
>100_bases TATGAATAAGAAACTCTACGCGCTATTCGCCGCGGCTTTGATCTCGGCACCGGCCTTCGCGACGGAAGAAATCGCCAATA TGGAAAACATTCAGCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MQKLLRLFVCFTLVFAPATFAQWQYAAQTPAQVSAQALSIESDLSALPDPLFMGPKEHIKVNQLLSAVLELQKTEGDAFK AALAQYRKAPTAPQWLLVENQYLTLNSLGSSKARLLQLTDTASREQLTGFGPYGVTQFRQELALTKLNIEYLVHFQLRSF RALIKNTFISPVPVIWTGLKVFAVYLLLVWWMANSKRIITLFRESQLETNTAPPLWVKFIWYISRANKAIAWLIAITVSL RILASLPSLQHLVYLEIFTWWILGGSIAISFILEFAYRNSRSSSKDVVALRLATIRRYVWSAIVAGVILQISVRTLGKGT IYYWIYSALYFWFVLVTVSVLRLWRKKVFEVVDRITERPVWVQWAIKRQDSFILNIPATAIAAVWLISHHFKHRIIATLS NYTMFSQALAYLFRIEVAKQTSNRDGNDSLVRIRGDAAFQYVLPPQQDSEWIDYASDEIQNLSRYLLTDSPAICVLSGER GVGTTSVLKKILGKVKNATPLYLNCPYDGYPELLKQLATGLGLAEESTEVQILAFLRKSETPYLIAVDNAQRLVKPMVGG LAGLMKLTNLLRRSKQNHRVVMAIEKASWRFVDRARGERLLFDWVSFLPRWNEKQISALLDSRVNQDIENPLSFDGLVVP KQWDQEETSEEERAKQGFYRILWHYSDGNPTVALRFFRLSLRRNKESDSVVVRLFHAPESKELEQMPKPMLAVLRSIVQL EVASPEELSECTQLSIAEVIGTLRFFESRGFIAWNEDKARVSDHWFRYITNVLDRQHLLVK
Sequences:
>Translated_781_residues MQKLLRLFVCFTLVFAPATFAQWQYAAQTPAQVSAQALSIESDLSALPDPLFMGPKEHIKVNQLLSAVLELQKTEGDAFK AALAQYRKAPTAPQWLLVENQYLTLNSLGSSKARLLQLTDTASREQLTGFGPYGVTQFRQELALTKLNIEYLVHFQLRSF RALIKNTFISPVPVIWTGLKVFAVYLLLVWWMANSKRIITLFRESQLETNTAPPLWVKFIWYISRANKAIAWLIAITVSL RILASLPSLQHLVYLEIFTWWILGGSIAISFILEFAYRNSRSSSKDVVALRLATIRRYVWSAIVAGVILQISVRTLGKGT IYYWIYSALYFWFVLVTVSVLRLWRKKVFEVVDRITERPVWVQWAIKRQDSFILNIPATAIAAVWLISHHFKHRIIATLS NYTMFSQALAYLFRIEVAKQTSNRDGNDSLVRIRGDAAFQYVLPPQQDSEWIDYASDEIQNLSRYLLTDSPAICVLSGER GVGTTSVLKKILGKVKNATPLYLNCPYDGYPELLKQLATGLGLAEESTEVQILAFLRKSETPYLIAVDNAQRLVKPMVGG LAGLMKLTNLLRRSKQNHRVVMAIEKASWRFVDRARGERLLFDWVSFLPRWNEKQISALLDSRVNQDIENPLSFDGLVVP KQWDQEETSEEERAKQGFYRILWHYSDGNPTVALRFFRLSLRRNKESDSVVVRLFHAPESKELEQMPKPMLAVLRSIVQL EVASPEELSECTQLSIAEVIGTLRFFESRGFIAWNEDKARVSDHWFRYITNVLDRQHLLVK >Mature_781_residues MQKLLRLFVCFTLVFAPATFAQWQYAAQTPAQVSAQALSIESDLSALPDPLFMGPKEHIKVNQLLSAVLELQKTEGDAFK AALAQYRKAPTAPQWLLVENQYLTLNSLGSSKARLLQLTDTASREQLTGFGPYGVTQFRQELALTKLNIEYLVHFQLRSF RALIKNTFISPVPVIWTGLKVFAVYLLLVWWMANSKRIITLFRESQLETNTAPPLWVKFIWYISRANKAIAWLIAITVSL RILASLPSLQHLVYLEIFTWWILGGSIAISFILEFAYRNSRSSSKDVVALRLATIRRYVWSAIVAGVILQISVRTLGKGT IYYWIYSALYFWFVLVTVSVLRLWRKKVFEVVDRITERPVWVQWAIKRQDSFILNIPATAIAAVWLISHHFKHRIIATLS NYTMFSQALAYLFRIEVAKQTSNRDGNDSLVRIRGDAAFQYVLPPQQDSEWIDYASDEIQNLSRYLLTDSPAICVLSGER GVGTTSVLKKILGKVKNATPLYLNCPYDGYPELLKQLATGLGLAEESTEVQILAFLRKSETPYLIAVDNAQRLVKPMVGG LAGLMKLTNLLRRSKQNHRVVMAIEKASWRFVDRARGERLLFDWVSFLPRWNEKQISALLDSRVNQDIENPLSFDGLVVP KQWDQEETSEEERAKQGFYRILWHYSDGNPTVALRFFRLSLRRNKESDSVVVRLFHAPESKELEQMPKPMLAVLRSIVQL EVASPEELSECTQLSIAEVIGTLRFFESRGFIAWNEDKARVSDHWFRYITNVLDRQHLLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89538; Mature: 89538
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLLRLFVCFTLVFAPATFAQWQYAAQTPAQVSAQALSIESDLSALPDPLFMGPKEHIK CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH VNQLLSAVLELQKTEGDAFKAALAQYRKAPTAPQWLLVENQYLTLNSLGSSKARLLQLTD HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCHHEEEECC TASREQLTGFGPYGVTQFRQELALTKLNIEYLVHFQLRSFRALIKNTFISPVPVIWTGLK CCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFAVYLLLVWWMANSKRIITLFRESQLETNTAPPLWVKFIWYISRANKAIAWLIAITVSL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RILASLPSLQHLVYLEIFTWWILGGSIAISFILEFAYRNSRSSSKDVVALRLATIRRYVW HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH SAIVAGVILQISVRTLGKGTIYYWIYSALYFWFVLVTVSVLRLWRKKVFEVVDRITERPV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WVQWAIKRQDSFILNIPATAIAAVWLISHHFKHRIIATLSNYTMFSQALAYLFRIEVAKQ EEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSNRDGNDSLVRIRGDAAFQYVLPPQQDSEWIDYASDEIQNLSRYLLTDSPAICVLSGER CCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GVGTTSVLKKILGKVKNATPLYLNCPYDGYPELLKQLATGLGLAEESTEVQILAFLRKSE CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC TPYLIAVDNAQRLVKPMVGGLAGLMKLTNLLRRSKQNHRVVMAIEKASWRFVDRARGERL CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCHH LFDWVSFLPRWNEKQISALLDSRVNQDIENPLSFDGLVVPKQWDQEETSEEERAKQGFYR HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHCCHHHHHHCCCEE ILWHYSDGNPTVALRFFRLSLRRNKESDSVVVRLFHAPESKELEQMPKPMLAVLRSIVQL EEEEEECCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHH EVASPEELSECTQLSIAEVIGTLRFFESRGFIAWNEDKARVSDHWFRYITNVLDRQHLLV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHCC K C >Mature Secondary Structure MQKLLRLFVCFTLVFAPATFAQWQYAAQTPAQVSAQALSIESDLSALPDPLFMGPKEHIK CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH VNQLLSAVLELQKTEGDAFKAALAQYRKAPTAPQWLLVENQYLTLNSLGSSKARLLQLTD HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCHHEEEECC TASREQLTGFGPYGVTQFRQELALTKLNIEYLVHFQLRSFRALIKNTFISPVPVIWTGLK CCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFAVYLLLVWWMANSKRIITLFRESQLETNTAPPLWVKFIWYISRANKAIAWLIAITVSL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RILASLPSLQHLVYLEIFTWWILGGSIAISFILEFAYRNSRSSSKDVVALRLATIRRYVW HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH SAIVAGVILQISVRTLGKGTIYYWIYSALYFWFVLVTVSVLRLWRKKVFEVVDRITERPV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WVQWAIKRQDSFILNIPATAIAAVWLISHHFKHRIIATLSNYTMFSQALAYLFRIEVAKQ EEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSNRDGNDSLVRIRGDAAFQYVLPPQQDSEWIDYASDEIQNLSRYLLTDSPAICVLSGER CCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GVGTTSVLKKILGKVKNATPLYLNCPYDGYPELLKQLATGLGLAEESTEVQILAFLRKSE CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC TPYLIAVDNAQRLVKPMVGGLAGLMKLTNLLRRSKQNHRVVMAIEKASWRFVDRARGERL CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCHH LFDWVSFLPRWNEKQISALLDSRVNQDIENPLSFDGLVVPKQWDQEETSEEERAKQGFYR HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHCCHHHHHHCCCEE ILWHYSDGNPTVALRFFRLSLRRNKESDSVVVRLFHAPESKELEQMPKPMLAVLRSIVQL EEEEEECCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHH EVASPEELSECTQLSIAEVIGTLRFFESRGFIAWNEDKARVSDHWFRYITNVLDRQHLLV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA