| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679720
Identifier: 37679720
GI number: 37679720
Start: 1576740
End: 1578170
Strand: Direct
Name: 37679720
Synonym: VV1536
Alternate gene names: NA
Gene position: 1576740-1578170 (Clockwise)
Preceding gene: 37679719
Following gene: 37679724
Centisome position: 47.0
GC content: 46.19
Gene sequence:
>1431_bases GTGTATAAGCGGTCATTTTTCGTTGTATTCAGTCTCATTATTTCATTGGTGTATTCCACTTTCTCTTTTGCGACTTCTTC AACCTCATTACCTGAGGGATTGAAAGGGGCTCTGTGTATCGTCCGTGCAGATGACAAGTTGGTTTTAGTCAATGAGATCT TAACTCATCAAATTTCTCTTCCTGGAGGAACGATCATTGCGGGTGAGGACCCTGCGCTTACCGCGCAAAGAGAAACTTGG GAAGAAACCGGGCTGGTGGTTACCGTAGGTAAAGTGCTTGGCTACAATGAACAGGCGGTATTCTATGACTGTATTTCTGA TTCATCGGTAGTGGCGTTCAACTTCAACAATAGTTTAGATGGCAATGAGCTTCCGGTTTGGTTCGCCCCACACTACGGCG TCGAAATTGCCTCTGCAATGCTACTGTCTCCTTCGGCGCTTGAAGCGAGTCAATACCGTTATCCGCAACAATGGCCAATG GTGCAACAGATGTTTGGACAAGCGACGGATCAAGCGGTGGCCTACGTCAATGATTTGGTTGAATCGGCGCCAAGTTATCA TCAAGTGGAGCTGGGTTGGTTAATGCAACTGCAAGCGTTTGTTGCATCGTCTCCAGTGCTGAGCGCATTGGGTTTGTTGC TCAGCTACTTCGCGATTTATCTGACTTCGCCTGAAATACTTTTAGTGGTAATGCCATTAGCTATGTGGCGTTTTGGCCGT GATTTCACCTATCAATTGTTTTTTGCCGTTGTTGCTACGTCACTGCTTTGCTTGGTTGCTCAACAAGGGTTTGCTCTTCC TAGGCCACATGTCTATTGGCCAGTGCTTGAGATGACGCAAAGTTATGGTTTCGGTTTTCCGAGCTTACCTATTGCGGTTT GGGCGTGTTTATCTGCTTTGATTTTACACCGACTAGGCTGGTTGCGAAGTGGACGAGCACTAAGATTGACTTCGTTAGTG ATCAGCGTGGTGATGTTTGGCAAATTCTACTCTGGCGCCGCGTTTATCGCCGATATGATGATTGGTGGTTTGCTCGGTGG CTTAGTGGCGTGGCACATCATTCGTTTGGATAGCAAACCGAATGTGAATGTCGCTCAGTTGCTTGGCGCAAAAAGCGTTT GGATTGCGATGGCCGTGTTGGCTGCGGTGTTAACCGCTATGTGGCCATTACCGGTGTTTTCCGCTTGGTTAGCCATATTA ATTGTGATTTCACTGTTGGTGGTGTTTTTCAAAACCTCACAGGTATCACTCTCTCAAGGTCATACGTTGATCATTGTTGT GGCGTTGCTTTCCTTCAACTTGATCATCACTTTGGCTCAAGGTGTTATCGCTTACAGTGGTCTCTATTCTTTCATTGTCG AGACTCTTCGTTATCCACTCATCGCCTTATTGTTTGCAGTTTTAGCAAAGCGTTTCAATCAACAGAATTAA
Upstream 100 bases:
>100_bases GCGCCAACTCTTTTGAGTAAAGAGATCTCGGTGTACGAATCGATGGCTTCGTTCTCAAAAGATACAAATAAAACAATAGG TAAAGTAAAGGTTGTCTGGC
Downstream 100 bases:
>100_bases GTGAAGAAATAAAAACGCCTCGGCTTTTTGTCCGAGGCGTTTTTTTACTCTTGGCAAATTAGCATTTGAACTGCGACACA AGGCGATCCAACTGGCCACA
Product: MutT/nudix family protein
Products: NA
Alternate protein names: Membrane-Associated Phospholipid Phosphatase; Phosphohydrolase; PAP2 Superfamily Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MYKRSFFVVFSLIISLVYSTFSFATSSTSLPEGLKGALCIVRADDKLVLVNEILTHQISLPGGTIIAGEDPALTAQRETW EETGLVVTVGKVLGYNEQAVFYDCISDSSVVAFNFNNSLDGNELPVWFAPHYGVEIASAMLLSPSALEASQYRYPQQWPM VQQMFGQATDQAVAYVNDLVESAPSYHQVELGWLMQLQAFVASSPVLSALGLLLSYFAIYLTSPEILLVVMPLAMWRFGR DFTYQLFFAVVATSLLCLVAQQGFALPRPHVYWPVLEMTQSYGFGFPSLPIAVWACLSALILHRLGWLRSGRALRLTSLV ISVVMFGKFYSGAAFIADMMIGGLLGGLVAWHIIRLDSKPNVNVAQLLGAKSVWIAMAVLAAVLTAMWPLPVFSAWLAIL IVISLLVVFFKTSQVSLSQGHTLIIVVALLSFNLIITLAQGVIAYSGLYSFIVETLRYPLIALLFAVLAKRFNQQN
Sequences:
>Translated_476_residues MYKRSFFVVFSLIISLVYSTFSFATSSTSLPEGLKGALCIVRADDKLVLVNEILTHQISLPGGTIIAGEDPALTAQRETW EETGLVVTVGKVLGYNEQAVFYDCISDSSVVAFNFNNSLDGNELPVWFAPHYGVEIASAMLLSPSALEASQYRYPQQWPM VQQMFGQATDQAVAYVNDLVESAPSYHQVELGWLMQLQAFVASSPVLSALGLLLSYFAIYLTSPEILLVVMPLAMWRFGR DFTYQLFFAVVATSLLCLVAQQGFALPRPHVYWPVLEMTQSYGFGFPSLPIAVWACLSALILHRLGWLRSGRALRLTSLV ISVVMFGKFYSGAAFIADMMIGGLLGGLVAWHIIRLDSKPNVNVAQLLGAKSVWIAMAVLAAVLTAMWPLPVFSAWLAIL IVISLLVVFFKTSQVSLSQGHTLIIVVALLSFNLIITLAQGVIAYSGLYSFIVETLRYPLIALLFAVLAKRFNQQN >Mature_476_residues MYKRSFFVVFSLIISLVYSTFSFATSSTSLPEGLKGALCIVRADDKLVLVNEILTHQISLPGGTIIAGEDPALTAQRETW EETGLVVTVGKVLGYNEQAVFYDCISDSSVVAFNFNNSLDGNELPVWFAPHYGVEIASAMLLSPSALEASQYRYPQQWPM VQQMFGQATDQAVAYVNDLVESAPSYHQVELGWLMQLQAFVASSPVLSALGLLLSYFAIYLTSPEILLVVMPLAMWRFGR DFTYQLFFAVVATSLLCLVAQQGFALPRPHVYWPVLEMTQSYGFGFPSLPIAVWACLSALILHRLGWLRSGRALRLTSLV ISVVMFGKFYSGAAFIADMMIGGLLGGLVAWHIIRLDSKPNVNVAQLLGAKSVWIAMAVLAAVLTAMWPLPVFSAWLAIL IVISLLVVFFKTSQVSLSQGHTLIIVVALLSFNLIITLAQGVIAYSGLYSFIVETLRYPLIALLFAVLAKRFNQQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52312; Mature: 52312
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRSFFVVFSLIISLVYSTFSFATSSTSLPEGLKGALCIVRADDKLVLVNEILTHQISL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHEECC PGGTIIAGEDPALTAQRETWEETGLVVTVGKVLGYNEQAVFYDCISDSSVVAFNFNNSLD CCCEEEECCCCCCCCCHHHHHHCCEEEEEHHHHCCCCCEEEEEECCCCCEEEEECCCCCC GNELPVWFAPHYGVEIASAMLLSPSALEASQYRYPQQWPMVQQMFGQATDQAVAYVNDLV CCCCCEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH ESAPSYHQVELGWLMQLQAFVASSPVLSALGLLLSYFAIYLTSPEILLVVMPLAMWRFGR HCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC DFTYQLFFAVVATSLLCLVAQQGFALPRPHVYWPVLEMTQSYGFGFPSLPIAVWACLSAL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILHRLGWLRSGRALRLTSLVISVVMFGKFYSGAAFIADMMIGGLLGGLVAWHIIRLDSKP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCC NVNVAQLLGAKSVWIAMAVLAAVLTAMWPLPVFSAWLAILIVISLLVVFFKTSQVSLSQG CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC HTLIIVVALLSFNLIITLAQGVIAYSGLYSFIVETLRYPLIALLFAVLAKRFNQQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYKRSFFVVFSLIISLVYSTFSFATSSTSLPEGLKGALCIVRADDKLVLVNEILTHQISL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHEECC PGGTIIAGEDPALTAQRETWEETGLVVTVGKVLGYNEQAVFYDCISDSSVVAFNFNNSLD CCCEEEECCCCCCCCCHHHHHHCCEEEEEHHHHCCCCCEEEEEECCCCCEEEEECCCCCC GNELPVWFAPHYGVEIASAMLLSPSALEASQYRYPQQWPMVQQMFGQATDQAVAYVNDLV CCCCCEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHH ESAPSYHQVELGWLMQLQAFVASSPVLSALGLLLSYFAIYLTSPEILLVVMPLAMWRFGR HCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC DFTYQLFFAVVATSLLCLVAQQGFALPRPHVYWPVLEMTQSYGFGFPSLPIAVWACLSAL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILHRLGWLRSGRALRLTSLVISVVMFGKFYSGAAFIADMMIGGLLGGLVAWHIIRLDSKP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCC NVNVAQLLGAKSVWIAMAVLAAVLTAMWPLPVFSAWLAILIVISLLVVFFKTSQVSLSQG CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC HTLIIVVALLSFNLIITLAQGVIAYSGLYSFIVETLRYPLIALLFAVLAKRFNQQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA