Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is ygjP [H]

Identifier: 37679671

GI number: 37679671

Start: 1523243

End: 1523776

Strand: Direct

Name: ygjP [H]

Synonym: VV1487

Alternate gene names: 37679671

Gene position: 1523243-1523776 (Clockwise)

Preceding gene: 37679669

Following gene: 37679672

Centisome position: 45.41

GC content: 45.88

Gene sequence:

>534_bases
ATGATCAGGTCCGATTCCATGATGCATCCGTCACTTCGCTACATTCAGGGATACCCGCAGCATATCGTGCAGCAAGTGGC
CCAATTGATTGAGTCACAACGTTTAATTCCTTGGTTTGATAAACGCTATCCTGTGCGTCACGACATTCGCAGTGAAAAAG
CATTGTTTGACTACGCGATGCAGATCAAGAACCAGTTTATGAAGAAAACGGGCCCCATCAGTAAAGTGGTGTACGACGGG
AAAATTCATCTGATTAACAACGCGCTCGGCTTGCACAGTGTCGTCTCTCGCAACCACGGCGGTAAACTCAAATCGAAAAA
TGAGATTCGCATTGCCAATGTGTTTAAAGACGCGCCGGAGCCTTTGCTGCGCATGTTGGTTGTGCACGAATTGGCGCACA
TTAAAGAGAAAGAGCATGATAAAGCCTTTTACTCTCTTTGCTGCTACATGGAGCCGGACTATCACCAACTGGAGCTGGAT
GCTCGTCTGTTTATGATTTACCTCGATTTAAAAGCTCAGGAAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
GTAATGAAAAGGGGCGCAAGTGTAGCCAATTTCGCTGCGGACGAAAAGAAAAAGCGATGATTCAAGGGGCGGAGTCAGGT
AAACTAGCGCGCTTTGAAAA

Downstream 100 bases:

>100_bases
TGACGAACAAACGAAAATCCGCCAAGCCATTAGAGCCTGCGAAACGAACCCCAAAACTGCGCACGAAAAAGAGTCGTGAT
CTCAGTGCGTCTGAATCGAG

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG
KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD
ARLFMIYLDLKAQEAKK

Sequences:

>Translated_177_residues
MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG
KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD
ARLFMIYLDLKAQEAKK
>Mature_177_residues
MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG
KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD
ARLFMIYLDLKAQEAKK

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082207, Length=160, Percent_Identity=60, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002725 [H]

Pfam domain/function: PF01863 DUF45 [H]

EC number: NA

Molecular weight: Translated: 20818; Mature: 20818

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAM
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QIKNQFMKKTGPISKVVYDGKIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPE
HHHHHHHHHCCCHHHEEECCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCHH
PLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELDARLFMIYLDLKAQEAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEEEECCHHCCCC
>Mature Secondary Structure
MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAM
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QIKNQFMKKTGPISKVVYDGKIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPE
HHHHHHHHHCCCHHHEEECCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCHH
PLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELDARLFMIYLDLKAQEAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]