| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ygjP [H]
Identifier: 37679671
GI number: 37679671
Start: 1523243
End: 1523776
Strand: Direct
Name: ygjP [H]
Synonym: VV1487
Alternate gene names: 37679671
Gene position: 1523243-1523776 (Clockwise)
Preceding gene: 37679669
Following gene: 37679672
Centisome position: 45.41
GC content: 45.88
Gene sequence:
>534_bases ATGATCAGGTCCGATTCCATGATGCATCCGTCACTTCGCTACATTCAGGGATACCCGCAGCATATCGTGCAGCAAGTGGC CCAATTGATTGAGTCACAACGTTTAATTCCTTGGTTTGATAAACGCTATCCTGTGCGTCACGACATTCGCAGTGAAAAAG CATTGTTTGACTACGCGATGCAGATCAAGAACCAGTTTATGAAGAAAACGGGCCCCATCAGTAAAGTGGTGTACGACGGG AAAATTCATCTGATTAACAACGCGCTCGGCTTGCACAGTGTCGTCTCTCGCAACCACGGCGGTAAACTCAAATCGAAAAA TGAGATTCGCATTGCCAATGTGTTTAAAGACGCGCCGGAGCCTTTGCTGCGCATGTTGGTTGTGCACGAATTGGCGCACA TTAAAGAGAAAGAGCATGATAAAGCCTTTTACTCTCTTTGCTGCTACATGGAGCCGGACTATCACCAACTGGAGCTGGAT GCTCGTCTGTTTATGATTTACCTCGATTTAAAAGCTCAGGAAGCAAAAAAATAA
Upstream 100 bases:
>100_bases GTAATGAAAAGGGGCGCAAGTGTAGCCAATTTCGCTGCGGACGAAAAGAAAAAGCGATGATTCAAGGGGCGGAGTCAGGT AAACTAGCGCGCTTTGAAAA
Downstream 100 bases:
>100_bases TGACGAACAAACGAAAATCCGCCAAGCCATTAGAGCCTGCGAAACGAACCCCAAAACTGCGCACGAAAAAGAGTCGTGAT CTCAGTGCGTCTGAATCGAG
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD ARLFMIYLDLKAQEAKK
Sequences:
>Translated_177_residues MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD ARLFMIYLDLKAQEAKK >Mature_177_residues MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAMQIKNQFMKKTGPISKVVYDG KIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPEPLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELD ARLFMIYLDLKAQEAKK
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=160, Percent_Identity=60, Blast_Score=211, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 20818; Mature: 20818
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAM CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QIKNQFMKKTGPISKVVYDGKIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPE HHHHHHHHHCCCHHHEEECCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCHH PLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELDARLFMIYLDLKAQEAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEEEECCHHCCCC >Mature Secondary Structure MIRSDSMMHPSLRYIQGYPQHIVQQVAQLIESQRLIPWFDKRYPVRHDIRSEKALFDYAM CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QIKNQFMKKTGPISKVVYDGKIHLINNALGLHSVVSRNHGGKLKSKNEIRIANVFKDAPE HHHHHHHHHCCCHHHEEECCEEEEECCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHCCHH PLLRMLVVHELAHIKEKEHDKAFYSLCCYMEPDYHQLELDARLFMIYLDLKAQEAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]