| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679612
Identifier: 37679612
GI number: 37679612
Start: 1454612
End: 1455325
Strand: Direct
Name: 37679612
Synonym: VV1428
Alternate gene names: NA
Gene position: 1454612-1455325 (Clockwise)
Preceding gene: 161486627
Following gene: 37679615
Centisome position: 43.36
GC content: 49.58
Gene sequence:
>714_bases GTGCTCTGTGCTTTCAGCACTGTTTTATTGGATTTTCGGACGAAAAGCATAATGTCGAACTACACAAGTGAAATTCAGCG CTTAGTGAATACCGCACTCGCTGAGCTGGCTGCGGAACATCAATCGGGCAAATTGGTCGACGCACCGATTGCCAACAACC ACTTTTTGGTACGTTGGGTGACCAAAGCGCTGAAAGGTCAGCGTTTCGACCGTTGTGTTGTCGCGGACTTAACTCGCTGG CAAAAAGCAGGACGCTCGAAAGGAAATGACGCGGCGCTGTTGCCAACGTTCCAACGTATTTCTGCGTTTTATGCTTCGTT CTTTGCCCAAGAGGGCGCACCAAAAGCGATTACCGACAAACAGATCGAAGCTTTTCTCGATGAAATGGAAAACGCGGGCT GGGAAGTGTCGACTTCAGATCCGATTGTCGGCTGTGGCAAAGTGCAGATTTTCACGGAAGGACAGAACTCTTTGGCACTG TGCGCGCAGCAGTGCGAAAACTGTTTTGACGGCGAGCTATTAGTGAAACCGATGAGCTGGTTTGTTCGCGGTCACCATGC CGGTTTCGTTGAGAAAGCGAGCGCGGCTGGGTTTATGGTTCACAAGGTGACGGACTATAAATCTAACGTCAAATATCATG GTGAATATTTGGTTTTCCCGAGCAACCTCGGTAACCAATTGGCGGAGATCCCGCTGAGCTTCACTGGAAAATAA
Upstream 100 bases:
>100_bases TGGCGGGCACATTGCGTTTTGGCACTGGCTCTCTAGTTGGTGCTTTGGTTGCGATACTGCCATCAGGAGTGACTTGGCCT ATGGTGCTAGTGATGTCTGC
Downstream 100 bases:
>100_bases ACAAACGCCGCTTTAAAAGCGGCGTTTGTTTTTCTAGCGCTTAGACCGATTTGAGCTGCTTAAATAGTTGGCAGACCACC GCCGTTAGATTGGGATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLCAFSTVLLDFRTKSIMSNYTSEIQRLVNTALAELAAEHQSGKLVDAPIANNHFLVRWVTKALKGQRFDRCVVADLTRW QKAGRSKGNDAALLPTFQRISAFYASFFAQEGAPKAITDKQIEAFLDEMENAGWEVSTSDPIVGCGKVQIFTEGQNSLAL CAQQCENCFDGELLVKPMSWFVRGHHAGFVEKASAAGFMVHKVTDYKSNVKYHGEYLVFPSNLGNQLAEIPLSFTGK
Sequences:
>Translated_237_residues MLCAFSTVLLDFRTKSIMSNYTSEIQRLVNTALAELAAEHQSGKLVDAPIANNHFLVRWVTKALKGQRFDRCVVADLTRW QKAGRSKGNDAALLPTFQRISAFYASFFAQEGAPKAITDKQIEAFLDEMENAGWEVSTSDPIVGCGKVQIFTEGQNSLAL CAQQCENCFDGELLVKPMSWFVRGHHAGFVEKASAAGFMVHKVTDYKSNVKYHGEYLVFPSNLGNQLAEIPLSFTGK >Mature_237_residues MLCAFSTVLLDFRTKSIMSNYTSEIQRLVNTALAELAAEHQSGKLVDAPIANNHFLVRWVTKALKGQRFDRCVVADLTRW QKAGRSKGNDAALLPTFQRISAFYASFFAQEGAPKAITDKQIEAFLDEMENAGWEVSTSDPIVGCGKVQIFTEGQNSLAL CAQQCENCFDGELLVKPMSWFVRGHHAGFVEKASAAGFMVHKVTDYKSNVKYHGEYLVFPSNLGNQLAEIPLSFTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26238; Mature: 26238
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCAFSTVLLDFRTKSIMSNYTSEIQRLVNTALAELAAEHQSGKLVDAPIANNHFLVRWV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH TKALKGQRFDRCVVADLTRWQKAGRSKGNDAALLPTFQRISAFYASFFAQEGAPKAITDK HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHH QIEAFLDEMENAGWEVSTSDPIVGCGKVQIFTEGQNSLALCAQQCENCFDGELLVKPMSW HHHHHHHHHHCCCCEECCCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEHHHHH FVRGHHAGFVEKASAAGFMVHKVTDYKSNVKYHGEYLVFPSNLGNQLAEIPLSFTGK HHHCCCCCHHHHHCCCCEEEEEECCHHCCCEECCEEEEECCCCCCHHHHCCCCCCCC >Mature Secondary Structure MLCAFSTVLLDFRTKSIMSNYTSEIQRLVNTALAELAAEHQSGKLVDAPIANNHFLVRWV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH TKALKGQRFDRCVVADLTRWQKAGRSKGNDAALLPTFQRISAFYASFFAQEGAPKAITDK HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHH QIEAFLDEMENAGWEVSTSDPIVGCGKVQIFTEGQNSLALCAQQCENCFDGELLVKPMSW HHHHHHHHHHCCCCEECCCCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEHHHHH FVRGHHAGFVEKASAAGFMVHKVTDYKSNVKYHGEYLVFPSNLGNQLAEIPLSFTGK HHHCCCCCHHHHHCCCCEEEEEECCHHCCCEECCEEEEECCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA