| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679553
Identifier: 37679553
GI number: 37679553
Start: 1392383
End: 1393768
Strand: Direct
Name: 37679553
Synonym: VV1369
Alternate gene names: NA
Gene position: 1392383-1393768 (Clockwise)
Preceding gene: 37679551
Following gene: 37679554
Centisome position: 41.51
GC content: 45.38
Gene sequence:
>1386_bases ATGAATAAAATGAAGTTGGCACTGGCGGCATCAATGATGCTCTCCATTGTGGGTTGTCAGTCTACGCCAGAAGAAAAACT CACCCAAGAGGTGACAAACGAAGTCGCTGAAAATGCGAGCACGCCGTTTGTTGGCATTCAACAATCGCATCAACAATGGT CTCAAGCTCTACAAGACAGCGGGAAGCTGGCGATCTACGCACCGGAAAACTTCAAAGATTTAACATCGGCTTGGAAAGAA GCCAGTGAGATCTACACAAAACTGGAAAAAGATCCTTCTCTGGCATCAAAAAGCTACTCTCTATTTTCTTCTGACACCTA TGCGCAAGCGTATCAAGAGCAAATTAAGTTAGTGGATCAAAATTTCGCAGCGTTAGAAAAACTGAAAGCGAAAGCGGACG TGATCCTGGCAGATTCTATTGCTCAGATGGATTACCTAGCAGAGATCAATGCTGCGAAACTCTACGCGAATGATTACAAC AAGGTGCTTTCTCAGTATAAGAAGCTATTTTCTTACGTTGTGGTTGATGAGCTAGAAGAAGCGCAAGAGAAACAAGTTGT TTTCCTCAATACCGCGAAACAGCTTGAGGTGAAGGTAGTGCACAAAACGTTCATTCTACCGCTTCAACAAGAGCTGAAAA CCCTAAAGAAAGAAGATTTTAATGAAGTTGCGCCAGTGAGTTTTGCCACGGCGGAAAACGTTATTAATATTGCAGCAAAC ATTGCTCAAACCAATCCTCGTGATAAAGCCGCAATTGAGTTGGCAGTGGCGAACGCTCAGTTTGAGATCGAACACGTTAA GCAAGTCACGCATCAGGTGAAACTGTTGGCTTCTGTCGAAGACGATGCTTTTGAAAACTCAGTTTTAGAAATTGAAAACA AGTTGCTCGCCATCTCTAAAGCAGTCGATGGTTCTGATTACCGTGATGTGATGCTAAGAGAGCAAAGCGAGAAGATTCTT GCAAGCGTGAAACGCATGCACGAAGCAAACAAAACCACCGATTTGTCTCAGCAGGTGACAGAGCTTAACAGTAAAGTGAA AGTGCTCGAAACCAAGTCGGCTGAGCAAAAAACAGCATTGGAAAAAGCCAATCAACGTGAGCTGGCGTTAAATGCCCACA TTGAACGCGAAGCTGCGCATATCAAGAGTTTGGAAGAGTTGGTCGCGAATCTGAAACTTCAGTTAGCGGCAAAAGATCAG CCTGCGTCTACTGTGGAACAGGCAGATCCAGTGCAAGAGGGGACAGCATTAGAAGAGCAAGCTCCTCAAGTAGAAGAGGC AGCCCCTAAAGCCGAAGCGATTGAAACTGAAGAAGCAGCAAGCGACGTTGAGGCGAGTAGCGAAACCGCAGCGCCAGAAA CGCAGCCAGAGAGTGCAGCAGAATAA
Upstream 100 bases:
>100_bases CGAGTACTCCATTTCTTCACGTTTAGCCTTTTGGCTGTTGATGCGAAGGGGGATGAAAAATGCTTGCGCGTCAATGAGCT AAGACATAAAGGGTAACAGA
Downstream 100 bases:
>100_bases CCTCAGAGCTTCGCTAACACTAATCCTAAAAAATGCCTCAACCATATGAGGCATTTTTGTTTCTTCGGTTTGCGAAAACA CGTTTGAATATCGCTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDSGKLAIYAPENFKDLTSAWKE ASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQNFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYN KVLSQYKKLFSYVVVDELEEAQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISKAVDGSDYRDVMLREQSEKIL ASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTALEKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQ PASTVEQADPVQEGTALEEQAPQVEEAAPKAEAIETEEAASDVEASSETAAPETQPESAAE
Sequences:
>Translated_461_residues MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDSGKLAIYAPENFKDLTSAWKE ASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQNFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYN KVLSQYKKLFSYVVVDELEEAQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISKAVDGSDYRDVMLREQSEKIL ASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTALEKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQ PASTVEQADPVQEGTALEEQAPQVEEAAPKAEAIETEEAASDVEASSETAAPETQPESAAE >Mature_461_residues MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDSGKLAIYAPENFKDLTSAWKE ASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQNFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYN KVLSQYKKLFSYVVVDELEEAQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISKAVDGSDYRDVMLREQSEKIL ASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTALEKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQ PASTVEQADPVQEGTALEEQAPQVEEAAPKAEAIETEEAASDVEASSETAAPETQPESAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50913; Mature: 50913
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCC GKLAIYAPENFKDLTSAWKEASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQ CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHH NFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYNKVLSQYKKLFSYVVVDELEE HHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISK HHCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH AVDGSDYRDVMLREQSEKILASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH EKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQPASTVEQADPVQEGTALEEQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCHHHH APQVEEAAPKAEAIETEEAASDVEASSETAAPETQPESAAE CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKMKLALAASMMLSIVGCQSTPEEKLTQEVTNEVAENASTPFVGIQQSHQQWSQALQDS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCC GKLAIYAPENFKDLTSAWKEASEIYTKLEKDPSLASKSYSLFSSDTYAQAYQEQIKLVDQ CCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHH NFAALEKLKAKADVILADSIAQMDYLAEINAAKLYANDYNKVLSQYKKLFSYVVVDELEE HHHHHHHHHHHHCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQEKQVVFLNTAKQLEVKVVHKTFILPLQQELKTLKKEDFNEVAPVSFATAENVINIAAN HHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IAQTNPRDKAAIELAVANAQFEIEHVKQVTHQVKLLASVEDDAFENSVLEIENKLLAISK HHCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH AVDGSDYRDVMLREQSEKILASVKRMHEANKTTDLSQQVTELNSKVKVLETKSAEQKTAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHH EKANQRELALNAHIEREAAHIKSLEELVANLKLQLAAKDQPASTVEQADPVQEGTALEEQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCHHHH APQVEEAAPKAEAIETEEAASDVEASSETAAPETQPESAAE CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA