| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679519
Identifier: 37679519
GI number: 37679519
Start: 1362408
End: 1363700
Strand: Direct
Name: 37679519
Synonym: VV1335
Alternate gene names: NA
Gene position: 1362408-1363700 (Clockwise)
Preceding gene: 37679518
Following gene: 37679520
Centisome position: 40.61
GC content: 46.33
Gene sequence:
>1293_bases ATGAAAATTGCAATAATAGGTACAGGCATCTCCGGATTAACATGTGGCTACCATCTGTACAAAGCGCATGACATTACACT GTTTGAAGCCAATGATTACATTGGAGGGCATACGGCGACGATCGATTTTGCACTCAACGGTAAAGACTACTCGGTCGATA CGGGGTTCATCGTCTATAACGATCGAACCTACCCCAATTTCATCAATATGATGGATGAAATTGGGGTGACTGGGCGTGCA ACCCAAATGAGCTTTAGTGTTCGCAATGACAGCAATGGACTTGAGTACAATGGCCACACGCTGGCGACACTGTTTGCCCA AAAAAGGAACTGGTTTAAACCGCAGTTCTACAGTTTTATTTTTGAAATTCTGCGCTTTAACAAACTGGCAAAAGCGTCTG CGAAACATGACGACATTGCCCAACAAACACTTGGGGAATTCTTAGATACACATGGCTTTAGTGACTATTTTAGCGACAAC TATATCTTGCCAATGGGGGCTGCGATTTGGTCATCGACCTTAGCGGATATGCGTGCTTTCCCGCTTACGTTTTTTCTACG TTTCTTTCTCAATCATGGCCTTCTTGATGTCACCAACCGACCACAGTGGTACGTGATTGATGGTGGCTCAAAAGCTTACA TCCCGCCATTAACGAAGGGCTTCTCTGATCGTATTCGTTTGAACTGTCCAGTTGAAAAAGTGATCCGCGACTCAACGGGT GTCACATTATATGTTGCAGGAGAAGCACAACGTTTTGATCACGTTATTTTTGCCTGTCACAGCGATCAAGCAATGTCGCT ATTGGAGGATGCTTCCTGTGATGAAGCCTCGATTTTGTCGCGTATGGCATATCAAGCCAACGAGGTTGTTTTGCATACTG ATGACAGCTTGCTGCCTCGCAGAAAGGCTGCGTGGGCATCGTGGAACTATTTACTCGATGGTAAGGAAGGAGAAGACACA CGCTTACCTTCGTTAACCTACAACATGAACATCCTCCAGCACATTGAAGCAGAACATACGTTTTGCGTGACGCTCAATAG CAGCGACAAGATAGACGAAGACAAAGTTATACGTAAGTTTGTTTACCACCATCCGGTATTTACCACAGAGTCGATCGCGG CACAGCAGAGACGAGATGACATTCAAGGGCGAAATCACACATGGTTTTGCGGTGCGTATTGGTACAACGGATTCCATGAA GATGGCGTTCGCAGCGCCTTGGATGTGGTGCGAGGCATCAACCTTGTGCAAGCGAAAGAAGAGGCGACTTCTTTTCACCA AGGGGCGGCGTGA
Upstream 100 bases:
>100_bases CGGTTTACCGCTCTTATTCGGTTACTTGCGTTACTGCCTTACCGTTGGCAGAAGGCGTTAGCTTCAAGATTAATTGCCCA ATAAATTCAAAGGATAATGT
Downstream 100 bases:
>100_bases GCATGGCCATCAGCAGTCGTCTGTTTGTGGGTAATGTTCGGCACCGCCGCTTTACCCCAGTAGAGCATAGTTTGAATTAT CAATTGTTCATGCCAGCGAT
Product: amino-oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKIAIIGTGISGLTCGYHLYKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYSFIFEILRFNKLAKASAKHDDIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGEAQRFDHVIFACHSDQAMSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVQAKEEATSFHQGAA
Sequences:
>Translated_430_residues MKIAIIGTGISGLTCGYHLYKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYSFIFEILRFNKLAKASAKHDDIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGEAQRFDHVIFACHSDQAMSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVQAKEEATSFHQGAA >Mature_430_residues MKIAIIGTGISGLTCGYHLYKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYSFIFEILRFNKLAKASAKHDDIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGEAQRFDHVIFACHSDQAMSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVQAKEEATSFHQGAA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48718; Mature: 48718
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIIGTGISGLTCGYHLYKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYN CEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEECCCEEEEC DRTYPNFINMMDEIGVTGRATQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYSFI CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCHHHHHHHHCCCCCHHHHHHH FEILRFNKLAKASAKHDDIAQQTLGEFLDTHGFSDYFSDNYILPMGAAIWSSTLADMRAF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHHHHHHHH PLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG HHHHHHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHCCCCC VTLYVAGEAQRFDHVIFACHSDQAMSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPR EEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCC RKAAWASWNYLLDGKEGEDTRLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKF HHHHHCCCEEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH VYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHEDGVRSALDVVRGINLVQAKE HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCCCCHHHHHHHHHHHHCCHHHHHHH EATSFHQGAA HHHHHCCCCC >Mature Secondary Structure MKIAIIGTGISGLTCGYHLYKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYN CEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEECCCEEEEC DRTYPNFINMMDEIGVTGRATQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYSFI CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCHHHHHHHHCCCCCHHHHHHH FEILRFNKLAKASAKHDDIAQQTLGEFLDTHGFSDYFSDNYILPMGAAIWSSTLADMRAF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHHHHHHHH PLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG HHHHHHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHCCCCC VTLYVAGEAQRFDHVIFACHSDQAMSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPR EEEEEECCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCC RKAAWASWNYLLDGKEGEDTRLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKF HHHHHCCCEEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH VYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHEDGVRSALDVVRGINLVQAKE HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCCCCHHHHHHHHHHHHCCHHHHHHH EATSFHQGAA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA