Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is yceG [C]

Identifier: 37679463

GI number: 37679463

Start: 1299223

End: 1300239

Strand: Direct

Name: yceG [C]

Synonym: VV1279

Alternate gene names: 37679463

Gene position: 1299223-1300239 (Clockwise)

Preceding gene: 161486633

Following gene: 37679464

Centisome position: 38.73

GC content: 45.23

Gene sequence:

>1017_bases
GTGATAAAAAAAATAATAGGGCTGCTCTTTATTGCCGCGTTGATGATAGGCGTTGCTACTTTTTGGGCATATTCGCAAAC
CAAAACCTACGTTAACCAACCGCTCAAACTCGAGGGCAGTGAGATCATCACCATTCCTTCAGGAAGTGGTTTTGGCCGCA
CATTGGCCATTCTGACAGAGAAAGGCTGGATTGAGGAACCCACACATCTGGCGCGCTTAATTCCCAAACTCTACCCAGAA
ATTACTCGAATAAAAGCAGGTACCTACCAAATCCAATCAGAGATGTCGCTTTATCAAGCTTTGGAAGTGTTCAATCTTGG
CAAAGAACATCAATTTACCATCACATTTGTCGAGGGAAGTCGTTTCCAAGAGTGGATGGTGCAGATGGCACAAGACCCTT
ATTTGGTTCATGAATTGGCAGGTTTGAGCGAAGCAGAAATTGCCAAGCGACTGGAGATACCCTATGAAAAGCTTGAAGGC
CTTTTTCTTGCGGAAACCTATCACTATACCTACGGCACTTCTGATGTTGAGTTACTCAAACGCGCACATGAGAAGTTAAA
TCGAGTGCTGGATAAACATTGGCAGCAGCGTCAAGATAAGTTGCCGCTAAAAAACAGTTATGAAGCGCTAATTCTAGCTT
CCATTATTGAGAAAGAAACCGCTATTGATGAAGAACGAGAGCGAGTTGCGTCTGTATTTGTGAACCGCTTAAATAAGCGA
ATGCGCTTGCAAACGGACCCTACGGTGATCTATGGCATGGGGGAGGCCTACGATGGCAACATTCGCAAGAAAGATCTACG
CACGCCAACGCCATACAATACTTACGTGATTAACGGATTGCCACCGACGCCGATTGCGATGGCGGGAGAAGCCTCTATCG
CTGCCGCATTAAATCCAGAGAACAGCAGCTATCTTTACTTTGTCGCTAGCGGTAAGGGTGGGCATGTGTTCTCAAAAACA
TTAGCTGAACATAATAGAGCAGTAAGAGCATATCTGCGGGAATTGAAGAAAAGATGA

Upstream 100 bases:

>100_bases
TGACCAACTCTTTACTGGGTGTTGCTCCTATCAATCAGATTCTCGAAACCCGTTACCCAATTGGTACCACAACACGATAT
TTTCAAGGAATTTTTAACTC

Downstream 100 bases:

>100_bases
AGCAAGCAAAATTTATCGTCATTGAAGGTTTAGAAGGCGCAGGGAAAAGCACGGCAATTCAAACGGTTTTGGACACATTA
CGCCAAGCAGGGATTAATGA

Product: periplasmic solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MIKKIIGLLFIAALMIGVATFWAYSQTKTYVNQPLKLEGSEIITIPSGSGFGRTLAILTEKGWIEEPTHLARLIPKLYPE
ITRIKAGTYQIQSEMSLYQALEVFNLGKEHQFTITFVEGSRFQEWMVQMAQDPYLVHELAGLSEAEIAKRLEIPYEKLEG
LFLAETYHYTYGTSDVELLKRAHEKLNRVLDKHWQQRQDKLPLKNSYEALILASIIEKETAIDEERERVASVFVNRLNKR
MRLQTDPTVIYGMGEAYDGNIRKKDLRTPTPYNTYVINGLPPTPIAMAGEASIAAALNPENSSYLYFVASGKGGHVFSKT
LAEHNRAVRAYLRELKKR

Sequences:

>Translated_338_residues
MIKKIIGLLFIAALMIGVATFWAYSQTKTYVNQPLKLEGSEIITIPSGSGFGRTLAILTEKGWIEEPTHLARLIPKLYPE
ITRIKAGTYQIQSEMSLYQALEVFNLGKEHQFTITFVEGSRFQEWMVQMAQDPYLVHELAGLSEAEIAKRLEIPYEKLEG
LFLAETYHYTYGTSDVELLKRAHEKLNRVLDKHWQQRQDKLPLKNSYEALILASIIEKETAIDEERERVASVFVNRLNKR
MRLQTDPTVIYGMGEAYDGNIRKKDLRTPTPYNTYVINGLPPTPIAMAGEASIAAALNPENSSYLYFVASGKGGHVFSKT
LAEHNRAVRAYLRELKKR
>Mature_338_residues
MIKKIIGLLFIAALMIGVATFWAYSQTKTYVNQPLKLEGSEIITIPSGSGFGRTLAILTEKGWIEEPTHLARLIPKLYPE
ITRIKAGTYQIQSEMSLYQALEVFNLGKEHQFTITFVEGSRFQEWMVQMAQDPYLVHELAGLSEAEIAKRLEIPYEKLEG
LFLAETYHYTYGTSDVELLKRAHEKLNRVLDKHWQQRQDKLPLKNSYEALILASIIEKETAIDEERERVASVFVNRLNKR
MRLQTDPTVIYGMGEAYDGNIRKKDLRTPTPYNTYVINGLPPTPIAMAGEASIAAALNPENSSYLYFVASGKGGHVFSKT
LAEHNRAVRAYLRELKKR

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=264, Percent_Identity=48.4848484848485, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 38476; Mature: 38476

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIIGLLFIAALMIGVATFWAYSQTKTYVNQPLKLEGSEIITIPSGSGFGRTLAILTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCEEEEEEC
KGWIEEPTHLARLIPKLYPEITRIKAGTYQIQSEMSLYQALEVFNLGKEHQFTITFVEGS
CCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
RFQEWMVQMAQDPYLVHELAGLSEAEIAKRLEIPYEKLEGLFLAETYHYTYGTSDVELLK
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHCCEEEEEEEEEECCCCHHHHHH
RAHEKLNRVLDKHWQQRQDKLPLKNSYEALILASIIEKETAIDEERERVASVFVNRLNKR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
MRLQTDPTVIYGMGEAYDGNIRKKDLRTPTPYNTYVINGLPPTPIAMAGEASIAAALNPE
EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEEEEECCC
NSSYLYFVASGKGGHVFSKTLAEHNRAVRAYLRELKKR
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKKIIGLLFIAALMIGVATFWAYSQTKTYVNQPLKLEGSEIITIPSGSGFGRTLAILTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCEEEEEEC
KGWIEEPTHLARLIPKLYPEITRIKAGTYQIQSEMSLYQALEVFNLGKEHQFTITFVEGS
CCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
RFQEWMVQMAQDPYLVHELAGLSEAEIAKRLEIPYEKLEGLFLAETYHYTYGTSDVELLK
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHCCEEEEEEEEEECCCCHHHHHH
RAHEKLNRVLDKHWQQRQDKLPLKNSYEALILASIIEKETAIDEERERVASVFVNRLNKR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
MRLQTDPTVIYGMGEAYDGNIRKKDLRTPTPYNTYVINGLPPTPIAMAGEASIAAALNPE
EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEEEEECCC
NSSYLYFVASGKGGHVFSKTLAEHNRAVRAYLRELKKR
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]