Click here to switch to the map view.

The map label for this gene is asmA [H]

Identifier: 37679446

GI number: 37679446

Start: 1281357

End: 1283513

Strand: Direct

Name: asmA [H]

Synonym: VV1262

Alternate gene names: 37679446

Gene position: 1281357-1283513 (Clockwise)

Preceding gene: 37679445

Following gene: 37679448

Centisome position: 38.2

GC content: 46.22

Gene sequence:

>2157_bases
GTGTTTTCTCTGTTCTTGTCTCAACTCTTGATGCAAAGGAATACGCATATGAAAAAACTGTTCCTTATTTTGGCTGCGCC
TATCGCGGTTGTCGTGATGGCTGCGATAGCGCTAGTGACCTTAGTAAACCCCAATCAATTTAAACCGCTGATCACCGAAC
AAGTGGCCAAGCAAACGGGTTTAGAGTTGGTGATTGAAGGCGACATTGAATGGCAATTTTTTCCTTCGATTGGTTTTTCT
CTAGGCAAAACGGAATTAAAGAATCCTCAGGGCTTTTCTCAAGAAAACTTGTTTAAAGTTGAGAACGTTGGGATCGACAT
CTCGGTGATGCCTCTGCTTGATAAAGTTTTGCAGATTGGTGATGTTCGCCTAGATGGTGCGGAATTCTATCTAGAGACGC
GTAAAGATGGGCAAAAGAATATTGATGCGCTAACTCAGCAGCAGAAAGCGCAACAAGAAACGGCTCAGCAAGAGGTGAGC
TCGGAGCCCACTACGGATGCTCCACAGCAACCTGGTGCGGCGGCAGACTGGCGTATGGAGCTGGCCGGGATCACGGTGAG
CAATGCCAAACTCGTTAACCAAGATCGACAAGCAGGTACTTCACTTGAACTCTATGATGTGAATTTCTCACTTTCAGAGT
TCGCCTTTGATCAATGGACCAAAGCGGAATTTTCAGCCAAAGGAAAAAACAACCAGCAACAGTTCAGTGCAAACGGCAAG
CTTGAGTTTCAGCTGGCGCAAGATTTCTCTTCTTATGCTCTGCGCAATATTGAGCTAAACAGCCAGTTTAGCGATCCAGC
CACGAAGATGGATAACATCAAGTTGGTGCTGGACACCTTCGAGTTTGATAAAGACAACGCACTGACATTTGAAATCAAAG
GCCAAGCATCCGGTATGGATCTTTCGGCCAATGGCTCGGCGCAGTTGCATGTGGATGCAGCCATCAGCACAGTGATGGTG
AAGGCATTCCAGTTGGAGTCACAATTAAATGGGAAATCACTGCCTCAATCGCCAATGAAGGTGGCAATGAGCTCTGAAGT
GACCTTTGATGTGCCAAGCAGCCATCTATCGCTTGTGCTGAATAAACTGACCGCCAACGCCATTGCATTAGACGGTAAAG
CCGATGTGACGTTAGCTGAGATTCCGAAAGTACGCTTTTCACTGCACAGTCCAGAGATTGATCTCGATGAATTTCTCGGC
CTAACGCAGCCTTCTCAAGAAACGGCAAGCACAAACAGCAGCAATGACAAAGACGCCCATCCAGAGGCAAACAACGAAGT
TGAGCCTGACCTGAGCGCCTTAAAAACGTTGGATGTGATTGGCCAAGTGAGTATTGATAAGTTCAAAGTCAATAATGCCA
AGCTGCAAAATGTCATCACCAAGTTCACGGTGAACCGTGGTATCGCGACTTTAGATCGTTTTGATGCCAATCTGTATCAA
GGTTCTATCAACGCCAGCGCAAAACTGGATGCACGTCGATCACCCGCTACCTATAGTGTGAAAAAGCGCATCAAAGGTGT
TCAGGTGCAACCGCTGTTGGTGGACGTGGCACAAAACGACAAGTTGGAAGGTACTGGCAATATCGATGTTGATGTGAAGG
GAGCAAGCTTAACGCCAAGCGGTATTCAGAAAAACCTTGTCGGTACAGTTGAAATCAATTTTGCTGATGGTGCCGTCAAT
GGTATTAACGTCGCGCAGATGATTCGTGAAAACTACGCCAAGATTAAAGGTGAAAAGTTAGACGCCACCGAAGGGGTGCA
AAAAACCGACTTCAGTTCAATGACGGCAACGTTGACGTTGAACAAAGGCAAGGTGACAACCAATAACATGCACATGCAAT
CTCCGCTACTGCGTATTCGTGGGAAAGGAGAAGCAAACTACATCAATCAAACGGTTGATTTTACGGTCAGTACTTCGATT
GTGGGATCGCTAGAAGGCCAAGGCGGTAAGGACATCGATGAACTGAGAGACGTGACAATTCCTATCAACATTTCAGGCAG
TTGGGCGGATCCAAAATTCAAGTTGGTGTTTGATGATGTGTTAAAGCAAAAAGCCCAAAAAGAGATTGACCGCGGAGTCG
AGAAGTTGACCGATAAGATCAAAGATGAGAAAACCAAAGAGGCGGTCGATGGTTTACTTAAAGGCTTGTTTAACTAG

Upstream 100 bases:

>100_bases
AGCTTAAGTCATTGTCTTGTCAGCGAGCTTTATTTTTAATTAAGAAAGTGGCACTTTAGATGCCACTTTCTTTTTTTGCA
GCAAGAACCGCGTAAAATAC

Downstream 100 bases:

>100_bases
CTAAGTCATAGAAAGAGCAGGGCGACATCATGTCGCCCTGCTTATAGATTGGAGTTGGAAAAGCATTTCCATTACCAGTC
GACACCTTTTAGTGCCTTGA

Product: putative AsmA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MFSLFLSQLLMQRNTHMKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPSIGFS
LGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFYLETRKDGQKNIDALTQQQKAQQETAQQEVS
SEPTTDAPQQPGAAADWRMELAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGK
LEFQLAQDFSSYALRNIELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAISTVMV
KAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLSLVLNKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLG
LTQPSQETASTNSSNDKDAHPEANNEVEPDLSALKTLDVIGQVSIDKFKVNNAKLQNVITKFTVNRGIATLDRFDANLYQ
GSINASAKLDARRSPATYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGASLTPSGIQKNLVGTVEINFADGAVN
GINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSI
VGSLEGQGGKDIDELRDVTIPINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN

Sequences:

>Translated_718_residues
MFSLFLSQLLMQRNTHMKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPSIGFS
LGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFYLETRKDGQKNIDALTQQQKAQQETAQQEVS
SEPTTDAPQQPGAAADWRMELAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGK
LEFQLAQDFSSYALRNIELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAISTVMV
KAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLSLVLNKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLG
LTQPSQETASTNSSNDKDAHPEANNEVEPDLSALKTLDVIGQVSIDKFKVNNAKLQNVITKFTVNRGIATLDRFDANLYQ
GSINASAKLDARRSPATYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGASLTPSGIQKNLVGTVEINFADGAVN
GINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSI
VGSLEGQGGKDIDELRDVTIPINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN
>Mature_718_residues
MFSLFLSQLLMQRNTHMKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPSIGFS
LGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIGDVRLDGAEFYLETRKDGQKNIDALTQQQKAQQETAQQEVS
SEPTTDAPQQPGAAADWRMELAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGK
LEFQLAQDFSSYALRNIELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAISTVMV
KAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLSLVLNKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLG
LTQPSQETASTNSSNDKDAHPEANNEVEPDLSALKTLDVIGQVSIDKFKVNNAKLQNVITKFTVNRGIATLDRFDANLYQ
GSINASAKLDARRSPATYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGASLTPSGIQKNLVGTVEINFADGAVN
GINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSI
VGSLEGQGGKDIDELRDVTIPINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=464, Percent_Identity=26.0775862068966, Blast_Score=135, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 78561; Mature: 78561

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLFLSQLLMQRNTHMKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTG
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
LELVIEGDIEWQFFPSIGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIG
CEEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHC
DVRLDGAEFYLETRKDGQKNIDALTQQQKAQQETAQQEVSSEPTTDAPQQPGAAADWRME
CEEECCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGK
EEEEEECCCHHHCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCE
LEFQLAQDFSSYALRNIELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMD
EEEEEHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCE
LSANGSAQLHVDAAISTVMVKAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLSLVL
ECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEECCHHHHHHHH
NKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSNDKDAH
HHHHCCEEEECCCCCEEHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCC
PEANNEVEPDLSALKTLDVIGQVSIDKFKVNNAKLQNVITKFTVNRGIATLDRFDANLYQ
CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCHHEE
GSINASAKLDARRSPATYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGASLTPS
CCCCCCEEECCCCCCCHHHHHHHHCCCEECEEEEEECCCCCCCCCCCEEEEEECCCCCCC
GIQKNLVGTVEINFADGAVNGINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTL
CHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE
NKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELRDVTI
ECCEEEECCEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCEEE
PINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN
EEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSLFLSQLLMQRNTHMKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTG
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
LELVIEGDIEWQFFPSIGFSLGKTELKNPQGFSQENLFKVENVGIDISVMPLLDKVLQIG
CEEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHC
DVRLDGAEFYLETRKDGQKNIDALTQQQKAQQETAQQEVSSEPTTDAPQQPGAAADWRME
CEEECCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
LAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFDQWTKAEFSAKGKNNQQQFSANGK
EEEEEECCCHHHCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCE
LEFQLAQDFSSYALRNIELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMD
EEEEEHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCE
LSANGSAQLHVDAAISTVMVKAFQLESQLNGKSLPQSPMKVAMSSEVTFDVPSSHLSLVL
ECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEECCHHHHHHHH
NKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSNDKDAH
HHHHCCEEEECCCCCEEHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCC
PEANNEVEPDLSALKTLDVIGQVSIDKFKVNNAKLQNVITKFTVNRGIATLDRFDANLYQ
CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCHHEE
GSINASAKLDARRSPATYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGASLTPS
CCCCCCEEECCCCCCCHHHHHHHHCCCEECEEEEEECCCCCCCCCCCEEEEEECCCCCCC
GIQKNLVGTVEINFADGAVNGINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTL
CHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE
NKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELRDVTI
ECCEEEECCEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCEEE
PINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN
EEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]