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The map label for this gene is 37679422

Identifier: 37679422

GI number: 37679422

Start: 1254991

End: 1256136

Strand: Direct

Name: 37679422

Synonym: VV1238

Alternate gene names: NA

Gene position: 1254991-1256136 (Clockwise)

Preceding gene: 37679421

Following gene: 37679425

Centisome position: 37.41

GC content: 46.68

Gene sequence:

>1146_bases
GTGATGATAAATATGAACAAAGAGCAATTGAAAACACCATTTTTCATGATTGACGAAGCAAAGTTGATCCAAAACCTAGA
GATTGCTAAGCAGTTAAAAGAAATTTCTGGGGTTAAGTTGGTATTGGCACTGAAGTGCTTTTCTACTTGGGGTGTATTCG
ACATCATCAAACCTTACCTAGACGGTACGACGAGCTCAGGGCCGTTCGAAGTGAAGCTAGGTTATGAAAAGTTTGGTGGC
GAAACGCACGCTTACAGTGTGGGTTATAGCGAAGATGACGTTCGTGAAGTCGCGGATCTGTGCGATAAAATCATTTTCAA
CTCACAGTCTCAGTTAGCTGCGCACCGTCATATCGTTGAAGGCAAAGCGTCTATCGGTCTGCGTTTGAACCCAGGTGTGA
GCTACGCAAGCCAAGATTTGGCAAACCCTGCTCGCCAGTTCTCACGTTTGGGTGTGCAGGCTGACCATATTGATCCGGCG
GTATTCGATAGCATTAATGGCGTGATGTTCCACATGAACTGTGAGAACAAAGATGTGGACGCCTTCATCGCGCTACTGGA
TTCCATCTCTGAGCGTTTCGGTGCTTATCTCAACAAACTTGATTGGGTCAGCATGGGCGGAGGCGTGTTCTTCACGTGGC
CAGGTTACGATGTTGAAAAGCTGGGTCTAGCGCTGAAAGCGTTCTCTGAGAAGCACGGCGTACAGATGTATTTAGAGCCA
GGTGAAGCGATCATCACTAAAACCACTGATCTGGTTGTGACCGTGGTGGATTTGGTTGAAAACGGCATGAAAACGGCAAT
CGTAGATTCTGCAACAGAAGCACACCGCCTTGATACGCTGATCTACAAAGAACCTGCATCAGTGCTTGAAGCATCAGAAA
ATGGTGAACATGAGTACGTGATTGGTTCTTGTTCATGTTTGGCCGGTGACCAATTCTGTGTGGCTAAGTTTGACCAGCCT
CTGCACGTTGGCCAGCGTCTGCACATTCTTGATAGCGCAGGTTACACTATGGTGAAACTGAACTGGTTCAACGGTCTGAA
GATGCCTTCCGTATACTGCGAACGTACCAATGGTGAGATTCAAAAACTCAACGAGTTTGGTTACGAAGACTTCAAGCGTA
CATTATCTCTCTGGTCGGTACAGTAA

Upstream 100 bases:

>100_bases
CTCCTGGTCAACCAACGATTCATACACTGAAGTAAGCCTTTCGCTGTATATTCAGTCCTATCTTCAAGCCGGTGCGTTGC
ACCGGCTTTGTTCAGTTAAA

Downstream 100 bases:

>100_bases
GTCTGGTTATATAGATAAGATAATAGAGGAGAGCAGCCAGTTGGCTGCTCTTTTTGTTTGTTAAGACTCGATAATCACGC
GAGTGTCTTCACTCAAGGAT

Product: diaminopimelate decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MMINMNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGG
ETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPA
VFDSINGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEP
GEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQP
LHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRTLSLWSVQ

Sequences:

>Translated_381_residues
MMINMNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGG
ETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPA
VFDSINGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEP
GEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQP
LHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRTLSLWSVQ
>Mature_381_residues
MMINMNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGG
ETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPA
VFDSINGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEP
GEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQP
LHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRTLSLWSVQ

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42416; Mature: 42416

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMINMNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYL
CEECCCHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHH
DGTTSSGPFEVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVE
CCCCCCCCEEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHH
AFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEP
HHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC
GEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYV
CCEEEEEHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEE
IGSCSCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEI
EEEEEEECCCCEEEECCCCCHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCHH
QKLNEFGYEDFKRTLSLWSVQ
HHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMINMNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYL
CEECCCHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHH
DGTTSSGPFEVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVE
CCCCCCCCEEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVD
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHH
AFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEP
HHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC
GEAIITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYV
CCEEEEEHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEE
IGSCSCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEI
EEEEEEECCCCEEEECCCCCHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCHH
QKLNEFGYEDFKRTLSLWSVQ
HHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA