Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679421

Identifier: 37679421

GI number: 37679421

Start: 1253681

End: 1254925

Strand: Direct

Name: 37679421

Synonym: VV1237

Alternate gene names: NA

Gene position: 1253681-1254925 (Clockwise)

Preceding gene: 37679420

Following gene: 37679422

Centisome position: 37.37

GC content: 47.15

Gene sequence:

>1245_bases
ATGGCAATTTTACAAATTGGTGCAGGCGGCGTAGGCTGGGTAATTGCACACAAAGCAGCACAAAACAACGATGTTCTAGG
TGACATTACTATCGCTTCTCGCACTTTAGACAAGTGTGAAAAGATCATTGAGTCGATTCATGGTCGTAACAACCTGAAAG
ATTCAAGTAAGAAACTTGAAGCTCGTGCTGTGAATGCTGACGATGTGGACTCGCTGGTTGCACTAATTAAGGAAGTAAAA
CCTGATTTGGTTATCAATGCAGGTCCTCCTTGGGTAAACCTGACCATTATGGAAGCGTGTTACCAAGCGAAAGTGTCTTA
CCTAGATACATCGGTAGCGGTTGACCTATGTAGTGAAGGTCAGCAAGTACCAGAAGCTTATGACGAGCAATGGAAATACC
GTGCTAAGTTCGAAGAAGCGGGCATCACGGGTATCCTTGGTGCAGGTTTCGATCCTGGTGTTGTTTCTGTTTTCGCTGCG
TATGCAGTGAAGCACCTATTTGATGAGATCGACACCATTGACGTGATGGACATCAACGCAGGCGATCACGGTAAGAAATT
TGCGACCAACTTTGACCCAGAGACGAACCTATTGGAAATCCAAGGGGATTCTTTCTACTGGGAAAATGAAGAGTGGAAGC
GCGTTCCTTGCCACACTCGTATGCTAGAGTTTGATTTCCCGAAATGTGGCAACTTCAAAGTGTACTCAATGGCGCACGAT
GAAGTTCGCTCGCTGAAAGAGTTCATCCCTGCTAAGCGCATTGAATTCTGGATGGGCTTTGGTGATCGTTACCTAAACTA
CTTCAACTGCATGCGTGACATTGGTTTGTTGAGTCCAGAGCCACTAACACTCCATGACGGTACGGTGGTTCAGCCTCTGC
AAGTATTGAAAGCGATGCTGCCAGATCCAACGTCTTTGGCTCCAGGTTACACCGGTTTAACGTGTATCGGTACTTGGGTT
CAAGGTAAGAAAGACGGCAAAGAGCGTAGCGTGTTTATCTACAATAACGCAGACCACGAAGTCGCTTACAAAGACGTCGA
GCACCAAGCAATTGCCTACACCACAGGTGTTCCTGCGATTACTGCTGCACTGCAGTATTTCCGCGGTGCTTGGGCTGAGG
CTGGCGTATTCAACATGGAACAGTTGGATCCAGATCCGTTCCTAGAAACCATGCCAGCTATCGGCTTGGATTGGGATGTG
CTAGAGCTAGCTCCTGGTCAACCAACGATTCATACACTGAAGTAA

Upstream 100 bases:

>100_bases
GATTCTTAACCCATGTCTGAAGATGTCAGATTTTGAATCTTTACTATCTAAAATCAACACTCTAGCGGCTGAGCTAGCGC
AATAAAGGTAACGGAAAACT

Downstream 100 bases:

>100_bases
GCCTTTCGCTGTATATTCAGTCCTATCTTCAAGCCGGTGCGTTGCACCGGCTTTGTTCAGTTAAAGTGATGATAAATATG
AACAAAGAGCAATTGAAAAC

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MAILQIGAGGVGWVIAHKAAQNNDVLGDITIASRTLDKCEKIIESIHGRNNLKDSSKKLEARAVNADDVDSLVALIKEVK
PDLVINAGPPWVNLTIMEACYQAKVSYLDTSVAVDLCSEGQQVPEAYDEQWKYRAKFEEAGITGILGAGFDPGVVSVFAA
YAVKHLFDEIDTIDVMDINAGDHGKKFATNFDPETNLLEIQGDSFYWENEEWKRVPCHTRMLEFDFPKCGNFKVYSMAHD
EVRSLKEFIPAKRIEFWMGFGDRYLNYFNCMRDIGLLSPEPLTLHDGTVVQPLQVLKAMLPDPTSLAPGYTGLTCIGTWV
QGKKDGKERSVFIYNNADHEVAYKDVEHQAIAYTTGVPAITAALQYFRGAWAEAGVFNMEQLDPDPFLETMPAIGLDWDV
LELAPGQPTIHTLK

Sequences:

>Translated_414_residues
MAILQIGAGGVGWVIAHKAAQNNDVLGDITIASRTLDKCEKIIESIHGRNNLKDSSKKLEARAVNADDVDSLVALIKEVK
PDLVINAGPPWVNLTIMEACYQAKVSYLDTSVAVDLCSEGQQVPEAYDEQWKYRAKFEEAGITGILGAGFDPGVVSVFAA
YAVKHLFDEIDTIDVMDINAGDHGKKFATNFDPETNLLEIQGDSFYWENEEWKRVPCHTRMLEFDFPKCGNFKVYSMAHD
EVRSLKEFIPAKRIEFWMGFGDRYLNYFNCMRDIGLLSPEPLTLHDGTVVQPLQVLKAMLPDPTSLAPGYTGLTCIGTWV
QGKKDGKERSVFIYNNADHEVAYKDVEHQAIAYTTGVPAITAALQYFRGAWAEAGVFNMEQLDPDPFLETMPAIGLDWDV
LELAPGQPTIHTLK
>Mature_413_residues
AILQIGAGGVGWVIAHKAAQNNDVLGDITIASRTLDKCEKIIESIHGRNNLKDSSKKLEARAVNADDVDSLVALIKEVKP
DLVINAGPPWVNLTIMEACYQAKVSYLDTSVAVDLCSEGQQVPEAYDEQWKYRAKFEEAGITGILGAGFDPGVVSVFAAY
AVKHLFDEIDTIDVMDINAGDHGKKFATNFDPETNLLEIQGDSFYWENEEWKRVPCHTRMLEFDFPKCGNFKVYSMAHDE
VRSLKEFIPAKRIEFWMGFGDRYLNYFNCMRDIGLLSPEPLTLHDGTVVQPLQVLKAMLPDPTSLAPGYTGLTCIGTWVQ
GKKDGKERSVFIYNNADHEVAYKDVEHQAIAYTTGVPAITAALQYFRGAWAEAGVFNMEQLDPDPFLETMPAIGLDWDVL
ELAPGQPTIHTLK

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46016; Mature: 45884

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILQIGAGGVGWVIAHKAAQNNDVLGDITIASRTLDKCEKIIESIHGRNNLKDSSKKLE
CEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARAVNADDVDSLVALIKEVKPDLVINAGPPWVNLTIMEACYQAKVSYLDTSVAVDLCSEG
HCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQVPEAYDEQWKYRAKFEEAGITGILGAGFDPGVVSVFAAYAVKHLFDEIDTIDVMDINA
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
GDHGKKFATNFDPETNLLEIQGDSFYWENEEWKRVPCHTRMLEFDFPKCGNFKVYSMAHD
CCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHEEEEECCCCCCCEEEEEECHH
EVRSLKEFIPAKRIEFWMGFGDRYLNYFNCMRDIGLLSPEPLTLHDGTVVQPLQVLKAML
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHC
PDPTSLAPGYTGLTCIGTWVQGKKDGKERSVFIYNNADHEVAYKDVEHQAIAYTTGVPAI
CCCCCCCCCCCCHHEEEHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCHHH
TAALQYFRGAWAEAGVFNMEQLDPDPFLETMPAIGLDWDVLELAPGQPTIHTLK
HHHHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCEEECC
>Mature Secondary Structure 
AILQIGAGGVGWVIAHKAAQNNDVLGDITIASRTLDKCEKIIESIHGRNNLKDSSKKLE
EEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARAVNADDVDSLVALIKEVKPDLVINAGPPWVNLTIMEACYQAKVSYLDTSVAVDLCSEG
HCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQVPEAYDEQWKYRAKFEEAGITGILGAGFDPGVVSVFAAYAVKHLFDEIDTIDVMDINA
CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
GDHGKKFATNFDPETNLLEIQGDSFYWENEEWKRVPCHTRMLEFDFPKCGNFKVYSMAHD
CCCCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHEEEEECCCCCCCEEEEEECHH
EVRSLKEFIPAKRIEFWMGFGDRYLNYFNCMRDIGLLSPEPLTLHDGTVVQPLQVLKAML
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHC
PDPTSLAPGYTGLTCIGTWVQGKKDGKERSVFIYNNADHEVAYKDVEHQAIAYTTGVPAI
CCCCCCCCCCCCHHEEEHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCHHH
TAALQYFRGAWAEAGVFNMEQLDPDPFLETMPAIGLDWDVLELAPGQPTIHTLK
HHHHHHHHHCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA