| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679364
Identifier: 37679364
GI number: 37679364
Start: 1196704
End: 1197333
Strand: Direct
Name: 37679364
Synonym: VV1180
Alternate gene names: NA
Gene position: 1196704-1197333 (Clockwise)
Preceding gene: 37679363
Following gene: 37679367
Centisome position: 35.67
GC content: 45.24
Gene sequence:
>630_bases ATGAAAATCAAACTATATTACGTCCATGATCCTATGTGCAGCTGGTGCTGGGGATACAAACCTACCTTGGAAAAATTGAA GCAACAGTTACCTGGAGTCATTCAGTTTGAGTATGTGGTTGGCGGCTTAGCGCCAGATTCAACATTGCCGATGCCACCTG AAATGCAGCAAAAAATTGAAAGCATTTGGCATCAAATTGAACAGCGCCTAGGGACTCAATTTAATTATGAGTTTTGGACA CGTTGTACACCAGTTCGTAGTACCTATCAGGCGTGTCGTGCGGTGATTGCCGCAGGTTTTCAAGATTCTTATGAGCAAAT GCTAGAGGCGATCCAACACGCGTATTATTTGCGCGCCATGCCACCACATGATGAAGCGACACATCGCCAGCTTGCGCAAG AAATTGGACTCAATGTTCAACAGTTTGAAAACGATGTGACGGGGCGTTTATTGGAAGGTGTCTTTGCAGATCAACTGAGT TTAGCTCGAAGCTTAGGCGTCAACGCTTACCCAAGTTTAGTATTGCAAATTAACGACGCGTATTTTCCAATCGAGATCGA TTACCTCTCCACCGAACCGACGTTAAAGTTGATCCGTGAGCGCATTGTCGAGAATATGCCCGCTCAATAG
Upstream 100 bases:
>100_bases ACCACTATGGAGCTTGAAAGAGTTTCGGTAGTGGTTATCGTCAAACGAAGATAGAATACGAAGGAGCTGTTTGGCTCCTT TTTGTTTTTGAGTTACTACC
Downstream 100 bases:
>100_bases TGTAATGAAAATAGCGTGATGGAATAGGTCAACGGGACACGCTGAAAAAGACCAACCTATTTTTATTGAAAGAGAAAGCC GCTCAACAGAGCGGCTTCTT
Product: protein-disulfide isomerase
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Dithiol-Disulfide Isomerase; Dsba Oxidoreductase; Thioredoxin-Like Fold; Protein-Disulfide Isomerase-Like Protein; DsbA Oxidoreductase; Thioredoxin
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT RCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFADQLS LARSLGVNAYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ
Sequences:
>Translated_209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT RCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFADQLS LARSLGVNAYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ >Mature_209_residues MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIESIWHQIEQRLGTQFNYEFWT RCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAMPPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFADQLS LARSLGVNAYPSLVLQINDAYFPIEIDYLSTEPTLKLIRERIVENMPAQ
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24161; Mature: 24161
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIE CEEEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHH SIWHQIEQRLGTQFNYEFWTRCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFADQLSLARSLGVNAYPSLVLQINDA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC YFPIEIDYLSTEPTLKLIRERIVENMPAQ EEEEEEEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIKLYYVHDPMCSWCWGYKPTLEKLKQQLPGVIQFEYVVGGLAPDSTLPMPPEMQQKIE CEEEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHH SIWHQIEQRLGTQFNYEFWTRCTPVRSTYQACRAVIAAGFQDSYEQMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC PPHDEATHRQLAQEIGLNVQQFENDVTGRLLEGVFADQLSLARSLGVNAYPSLVLQINDA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC YFPIEIDYLSTEPTLKLIRERIVENMPAQ EEEEEEEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA