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The map label for this gene is motY [H]

Identifier: 37679367

GI number: 37679367

Start: 1199667

End: 1200554

Strand: Direct

Name: motY [H]

Synonym: VV1183

Alternate gene names: 37679367

Gene position: 1199667-1200554 (Clockwise)

Preceding gene: 37679364

Following gene: 37679377

Centisome position: 35.76

GC content: 45.72

Gene sequence:

>888_bases
GTGATAATGAAAAAGTGGCTAATAACCAGTGGTTTAGTACTAACTACCTTTGCATCATTGCCATTGGCAGCGATGACGAA
GCGTTATATTGCCACCCCGCAGCAATCACAATGGGAAATGGTGATGAATTCACCGCTGGAATGCCGTTTGGTGCATCCGA
TCCCTAACTACGGTGATGCGGAATTCTCTTCACGCGCAAGTAAAAAAATTGTGTTGGATTTTGAGCTAAAAATGCGTCGA
CCTATGGGCGAAACGCGCAATGTGAGTTTGATTTCGATGCCGCCTCCATGGCGACCAGGAGAAAATGCCGACCGCATTAC
TAATATTAAGTTCTTTCAACAGTTTAATGGTTATGTTGGTGGGCAAACGGCATGGGGCATTCTGTCTGAGTTAGAGAAAG
GGCGTTATCCGACGTTTAGTTATCAAGATTGGCAAAGCCGTGACCAGAGAATTGAAGTCGCGCTATCTGCCGTTCTGTTC
CAGCAAAAATACAATGTATTCAGCGATTGTGTCGCCAATCTGTTGCCTTACAGCTTTGAAGATATTTCGTTCACGATTCT
GCATTATGAACGCAATGGGGATAAACTCACCAAGGCATCGCAAAAGCGCTTGTCGCAGATTGCTGAATACGTGCGCTACA
ACTCTGATATTGATTTGGTGTTGGTGTCGACTTACACCGATTCCACCGATGGTACTAGCGTGAGCCAAAACTTATCGGAG
CGTAGAGCGGAATCGTTGAGAGATTACTTCAAAGCACTAGGACTGCCGGAAGATCGTATCCAAGTTCAAGGTTATGGTAA
ACGCCGTCCAATTGCAGACAACGCAACGCCTATTGGTAAAGATAAAAACCGCCGCGTTGTCATTTCACTGGGGCGAAGTG
AAGTTTAG

Upstream 100 bases:

>100_bases
TCCTATTTGGCGAGGTTTTTGCATAAATGTGTAAGTCAGATAGAATTCATCCGGTAGTGGCAAATGTCTGCCACGCAACC
GTGAGCGAGTAAGAGAAGTA

Downstream 100 bases:

>100_bases
TTGAGTTTGAACTTTGCGATGATTTCGCAATGGGTAGCCGTGTCAATCTTCTCTACCAGTTGCGCGATCTTTGGGTTTGG
GTGGCGCTTTAAAAAATCGA

Product: sodium-type flagellar protein MotY precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MIMKKWLITSGLVLTTFASLPLAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRR
PMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLF
QQKYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSE
RRAESLRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV

Sequences:

>Translated_295_residues
MIMKKWLITSGLVLTTFASLPLAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRR
PMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLF
QQKYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSE
RRAESLRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
>Mature_295_residues
MIMKKWLITSGLVLTTFASLPLAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDAEFSSRASKKIVLDFELKMRR
PMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVGGQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLF
QQKYNVFSDCVANLLPYSFEDISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSE
RRAESLRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33761; Mature: 33761

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKWLITSGLVLTTFASLPLAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDA
CCCHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCC
EFSSRASKKIVLDFELKMRRPMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVG
HHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
GQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFE
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSE
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHH
RRAESLRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIMKKWLITSGLVLTTFASLPLAAMTKRYIATPQQSQWEMVMNSPLECRLVHPIPNYGDA
CCCHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCC
EFSSRASKKIVLDFELKMRRPMGETRNVSLISMPPPWRPGENADRITNIKFFQQFNGYVG
HHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
GQTAWGILSELEKGRYPTFSYQDWQSRDQRIEVALSAVLFQQKYNVFSDCVANLLPYSFE
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DISFTILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSE
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHH
RRAESLRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISLGRSEV
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8021208; 12620739 [H]