| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is menC [H]
Identifier: 37679303
GI number: 37679303
Start: 1127385
End: 1128374
Strand: Direct
Name: menC [H]
Synonym: VV1119
Alternate gene names: 37679303
Gene position: 1127385-1128374 (Clockwise)
Preceding gene: 161486639
Following gene: 37679304
Centisome position: 33.61
GC content: 50.2
Gene sequence:
>990_bases ATGAAATCAGCCAAACTGTACCGCTACACCTTGCCAATGGACAGCGGTGTTGTGCTAAGAGATGAGAAACTGACGGAGCG TGTTGGCTACATTATTGAGCTGAACATGAACGGTCAAAAAGGGTATGGCGAAGTTGCACCATTACCAGGATTTAGCTTAG AGACCATAGAAGAAGCGGGCATTGAAGCGCAAGCACAGCTTGAGTTGTGGATGAACACCGATCATCCCATCGATTACGAC GCCTTGCTGCCTTCCGTTGCGTTTGGTCTTTCCACCGCGATGTATGAGTTGGAAGGGAAGTTGCCTCGCGATGGGCACTA TTTGCCCGCGCCACTTTGTACTGGCGATCCCGATGAACTCATTCCGGTATTGAATGCGATGCAAGGTGAGAAAGTCGCCA AAGTCAAAGTGGGTTTGTACGAACCAATTCGTGATGGCATGCTGGTCAACTTGTTCTTGGAAAGCATCCCAGATCTCACA CTGAGACTGGATGCCAATCGTGCTTGGACGCCAGAAAAAGCGCAGCAATTTGCCAAGTACATCACCCCCTCTTTGCGTCA GCGGATCGTGTTTATCGAAGAGCCCTGCCAAAAGCCCGGAGATAGCCTCTCTTTTGCTATCAACACCGGGATTGCGATTG CATGGGATGAAACCTTACAACACGCGCTGCACCGACCTGACTTTGCGCTTGACGATCTCACGGGCGTGAAAGCGATCGTC ATCAAACCAACGTTGATCGGTTCATTGCCTCGTTGTATTGCGCTGATCAAAAAAGCGCACTCTTTGGGCATCAAAGCGGT CATCAGTTCAAGTATCGAATCAAGTTTAGGGCTTACCCAGTTAGCGCGTTTTGCCAAATGGCAGTTGCCTGACGTGACGC CGGGCTTGGACACCATAAGTTTGTTCCAATCGCAGTTAATGGTGGGATGGCCGAAATGCTCGCTGCCGATCGCCTCGTTA GAAGAACAGCAATTGGTGTGGCATTCATAA
Upstream 100 bases:
>100_bases CTGCATCGTTTAGGGACTTTTCTTTGCGATTGACGGTCTCATTCATAAAGAGTCTGACTTTCAGTAAAGCAATTTGTCGA TGAAGTATTAAGGGACAGCT
Downstream 100 bases:
>100_bases TGGGTGAAAAGGCATTGGTCAGTGAACAACCATTGTGGAAATATTGGGCTCAGCAGAGCCCATTTTCTATGGCGCTGAAC TCATCACGTTATCAATTCAA
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKSAKLYRYTLPMDSGVVLRDEKLTERVGYIIELNMNGQKGYGEVAPLPGFSLETIEEAGIEAQAQLELWMNTDHPIDYD ALLPSVAFGLSTAMYELEGKLPRDGHYLPAPLCTGDPDELIPVLNAMQGEKVAKVKVGLYEPIRDGMLVNLFLESIPDLT LRLDANRAWTPEKAQQFAKYITPSLRQRIVFIEEPCQKPGDSLSFAINTGIAIAWDETLQHALHRPDFALDDLTGVKAIV IKPTLIGSLPRCIALIKKAHSLGIKAVISSSIESSLGLTQLARFAKWQLPDVTPGLDTISLFQSQLMVGWPKCSLPIASL EEQQLVWHS
Sequences:
>Translated_329_residues MKSAKLYRYTLPMDSGVVLRDEKLTERVGYIIELNMNGQKGYGEVAPLPGFSLETIEEAGIEAQAQLELWMNTDHPIDYD ALLPSVAFGLSTAMYELEGKLPRDGHYLPAPLCTGDPDELIPVLNAMQGEKVAKVKVGLYEPIRDGMLVNLFLESIPDLT LRLDANRAWTPEKAQQFAKYITPSLRQRIVFIEEPCQKPGDSLSFAINTGIAIAWDETLQHALHRPDFALDDLTGVKAIV IKPTLIGSLPRCIALIKKAHSLGIKAVISSSIESSLGLTQLARFAKWQLPDVTPGLDTISLFQSQLMVGWPKCSLPIASL EEQQLVWHS >Mature_329_residues MKSAKLYRYTLPMDSGVVLRDEKLTERVGYIIELNMNGQKGYGEVAPLPGFSLETIEEAGIEAQAQLELWMNTDHPIDYD ALLPSVAFGLSTAMYELEGKLPRDGHYLPAPLCTGDPDELIPVLNAMQGEKVAKVKVGLYEPIRDGMLVNLFLESIPDLT LRLDANRAWTPEKAQQFAKYITPSLRQRIVFIEEPCQKPGDSLSFAINTGIAIAWDETLQHALHRPDFALDDLTGVKAIV IKPTLIGSLPRCIALIKKAHSLGIKAVISSSIESSLGLTQLARFAKWQLPDVTPGLDTISLFQSQLMVGWPKCSLPIASL EEQQLVWHS
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=321, Percent_Identity=56.386292834891, Blast_Score=354, Evalue=4e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 36376; Mature: 36376
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAKLYRYTLPMDSGVVLRDEKLTERVGYIIELNMNGQKGYGEVAPLPGFSLETIEEAG CCCCCEEEEECCCCCCEEEECHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCC IEAQAQLELWMNTDHPIDYDALLPSVAFGLSTAMYELEGKLPRDGHYLPAPLCTGDPDEL CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH IPVLNAMQGEKVAKVKVGLYEPIRDGMLVNLFLESIPDLTLRLDANRAWTPEKAQQFAKY HHHHHHHCCCCEEEEEECCHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH ITPSLRQRIVFIEEPCQKPGDSLSFAINTGIAIAWDETLQHALHRPDFALDDLTGVKAIV HCHHHHHEEEEEECCCCCCCCCEEEEEECCEEEEEHHHHHHHHCCCCCCCCCCCCCEEEE IKPTLIGSLPRCIALIKKAHSLGIKAVISSSIESSLGLTQLARFAKWQLPDVTPGLDTIS ECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHH LFQSQLMVGWPKCSLPIASLEEQQLVWHS HHHHHHHCCCCCCCCCHHCCCCCHHCCCC >Mature Secondary Structure MKSAKLYRYTLPMDSGVVLRDEKLTERVGYIIELNMNGQKGYGEVAPLPGFSLETIEEAG CCCCCEEEEECCCCCCEEEECHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCC IEAQAQLELWMNTDHPIDYDALLPSVAFGLSTAMYELEGKLPRDGHYLPAPLCTGDPDEL CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH IPVLNAMQGEKVAKVKVGLYEPIRDGMLVNLFLESIPDLTLRLDANRAWTPEKAQQFAKY HHHHHHHCCCCEEEEEECCHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH ITPSLRQRIVFIEEPCQKPGDSLSFAINTGIAIAWDETLQHALHRPDFALDDLTGVKAIV HCHHHHHEEEEEECCCCCCCCCEEEEEECCEEEEEHHHHHHHHCCCCCCCCCCCCCEEEE IKPTLIGSLPRCIALIKKAHSLGIKAVISSSIESSLGLTQLARFAKWQLPDVTPGLDTIS ECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHH LFQSQLMVGWPKCSLPIASLEEQQLVWHS HHHHHHHCCCCCCCCCHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]