| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679283
Identifier: 37679283
GI number: 37679283
Start: 1103357
End: 1105315
Strand: Direct
Name: 37679283
Synonym: VV1099
Alternate gene names: NA
Gene position: 1103357-1105315 (Clockwise)
Preceding gene: 37679282
Following gene: 37679286
Centisome position: 32.89
GC content: 44.72
Gene sequence:
>1959_bases ATGAAATTTGTATGGTCAGTGTGGCTTTTACTTGCCGCGAGCTTTTCTCTTTTTGCGGGTGAATCGCTTGTGTTAACCCC CACACCAGAATGGGTTGTGAAGCAAACTTTTGACAAAGAGAATCGACGAGATCGAGTGGATGGCAGCATTTTCCTGTTAG TGGACAAACAGTACAACTTTACGTTGCCCAAGCCGATGATGTACACCCACTATGCAACCAAATCCGTTAATTCTAAAGGG GTTGAAGACAACTCTCAGATCTCCATTTCGTTTGATCCTCATTATGAAAAAGTGCTATTTCACCACGTCGATGTATGGCG CGATGGTCAACGTATTGATAAGTCGCGAGAGGTGGAGTTAAAGCGTTTTAAGCAAGAATCCGACTTAGAAAAACTGTTGT ATAACGGCACTGAAACGTATTACTTGGTTTTGAAGAATGTCCAAGTTGGCGACATTATTGACTACAGCTTTAGCATTGAA GGAGCCAACCCTGTTTTTGGTGATAAGTTTGATACATGGGTTAGATTGGGTTGGTCAGTGCCAGTGGCTAAAGTGTACGC ACGCAGCTTGGTCCCTGTAGACAAAGGTTTTACCATCACACGCGTTGGGAACTCAGAGTTCGGTTCATTGACGCATCGCC AAGTTGGCGCGATGGAAGAGTACGTTTTTGAAGATGGTAGAAGAGCGTACGATTTTGATGAAAAAGATCAGCCAAGCTGG TTTATCCCATACCCTTATATCAATGTTTCGAACTACGATAACTGGCAAGAGGTGGCTCAATGGGCGCTTCCTCTTTACCC AAATTCTACCTCTGGGCGTTTGTTCGCTAAAGCGCTAGAGCAGTTGAAAGCTTTGCCTTCAAAAGAAGCGCAAATCATGG CGGCGATTAAACTTTCGCAGCAAAAAATACGTTATTTGGGTATTGAGAACGGTATCGGCTCACACGCTCCTCGTTTGCCT GAGCAAATCTTGGAGCAAGGTTATGGTGATTGCAAAGACAAATCTTTGCTTCTGGCGACCTTGTTAAACCAACTTGGCGT TGAAGCTTATCCCGCATTAGTGAGTACCGTTCATCGCGAGAAACTCAACGAACAACTGCCGGGTCATAGTGCATTCGACC ATGTTATTGTGAATTTCTTCCATCAAGGTATTGAATATTGGGTTGATCCGACAGTTACAGAACAGGGCGATGCGTTAGAT TCGATTGTACAGTCTGATCTTGGTTACGCGCTGGTGATTAAGCCCGAATCTGTTTGGTTGAGTGAGATGAATGTCAACAA TACCAATCAGATCACCTCAAGTGTTGAATACCACTTCAAGCACCAAAAAGAGGGTGACAGCACGATGAAGATCACGACTC TTTACGAAGGGCATCAAGCTGAGCGTATGCGTCGCTACCTAACGGCAAACTCAATGGATACGGTGATGGGGGAGTATGAA GACTACTATAGTCGCTTCTATCAAGGCGTTTATGCGGCGGAAGAATTTGAGTATCAAGATGACCCTCAGAGCAATGTTGT GACCATGGTCGAAACTTACGTTCTCGAGAACCCGTGGATGGAAGGTGATGAGAATACTGTGCGAGTGGAAGTGACGGCGG ATATCATCAATAACTCGCTCTATGCGCCAGAAGCTCAAAATCGTAAAACTCCGTACTACGTTGGATCGCCTTTGATGATA GAGCAGAATATCGTGGTGAACTTGCCAGATAGACTGAAGCTCGAAGAGGAAGCGTTTTCAGTTAAGAATGATACCTACTC GCTGGATGTTTCGATTAAGGGTGATGGGGAAGGGCTGTTACAGGTATTGGCGCCAGTTTATAAGAAAATCAACATGAACT ACCGGTACCAAAGAAAGGCGTCCTCGGTTTCGGTTGATGAACTACCGAAGTACATCAAAGAGACAAAGCAAGCGAATGAG TTTATGACCTACTACTTCAGCTATGCCAAAGGAAAATAA
Upstream 100 bases:
>100_bases ATTTGGCGGGTTTCTTTGTAAAGGGCTTACTATTTGCCTCTTAACTCGTTAGTATTCATCCGATTAATTAAATGAAATTA AAATATAGCGTTGGATAAAT
Downstream 100 bases:
>100_bases CAAGGAACCAAGATTCCTCATGTTTGCCCATTGAGTGCATCTGAGAGGAGTTCAAGGGAAAAACGACACAAGGCCACCAA TCATTTTGTGGCCTTTATTG
Product: transglutaminase-like enzyme
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MKFVWSVWLLLAASFSLFAGESLVLTPTPEWVVKQTFDKENRRDRVDGSIFLLVDKQYNFTLPKPMMYTHYATKSVNSKG VEDNSQISISFDPHYEKVLFHHVDVWRDGQRIDKSREVELKRFKQESDLEKLLYNGTETYYLVLKNVQVGDIIDYSFSIE GANPVFGDKFDTWVRLGWSVPVAKVYARSLVPVDKGFTITRVGNSEFGSLTHRQVGAMEEYVFEDGRRAYDFDEKDQPSW FIPYPYINVSNYDNWQEVAQWALPLYPNSTSGRLFAKALEQLKALPSKEAQIMAAIKLSQQKIRYLGIENGIGSHAPRLP EQILEQGYGDCKDKSLLLATLLNQLGVEAYPALVSTVHREKLNEQLPGHSAFDHVIVNFFHQGIEYWVDPTVTEQGDALD SIVQSDLGYALVIKPESVWLSEMNVNNTNQITSSVEYHFKHQKEGDSTMKITTLYEGHQAERMRRYLTANSMDTVMGEYE DYYSRFYQGVYAAEEFEYQDDPQSNVVTMVETYVLENPWMEGDENTVRVEVTADIINNSLYAPEAQNRKTPYYVGSPLMI EQNIVVNLPDRLKLEEEAFSVKNDTYSLDVSIKGDGEGLLQVLAPVYKKINMNYRYQRKASSVSVDELPKYIKETKQANE FMTYYFSYAKGK
Sequences:
>Translated_652_residues MKFVWSVWLLLAASFSLFAGESLVLTPTPEWVVKQTFDKENRRDRVDGSIFLLVDKQYNFTLPKPMMYTHYATKSVNSKG VEDNSQISISFDPHYEKVLFHHVDVWRDGQRIDKSREVELKRFKQESDLEKLLYNGTETYYLVLKNVQVGDIIDYSFSIE GANPVFGDKFDTWVRLGWSVPVAKVYARSLVPVDKGFTITRVGNSEFGSLTHRQVGAMEEYVFEDGRRAYDFDEKDQPSW FIPYPYINVSNYDNWQEVAQWALPLYPNSTSGRLFAKALEQLKALPSKEAQIMAAIKLSQQKIRYLGIENGIGSHAPRLP EQILEQGYGDCKDKSLLLATLLNQLGVEAYPALVSTVHREKLNEQLPGHSAFDHVIVNFFHQGIEYWVDPTVTEQGDALD SIVQSDLGYALVIKPESVWLSEMNVNNTNQITSSVEYHFKHQKEGDSTMKITTLYEGHQAERMRRYLTANSMDTVMGEYE DYYSRFYQGVYAAEEFEYQDDPQSNVVTMVETYVLENPWMEGDENTVRVEVTADIINNSLYAPEAQNRKTPYYVGSPLMI EQNIVVNLPDRLKLEEEAFSVKNDTYSLDVSIKGDGEGLLQVLAPVYKKINMNYRYQRKASSVSVDELPKYIKETKQANE FMTYYFSYAKGK >Mature_652_residues MKFVWSVWLLLAASFSLFAGESLVLTPTPEWVVKQTFDKENRRDRVDGSIFLLVDKQYNFTLPKPMMYTHYATKSVNSKG VEDNSQISISFDPHYEKVLFHHVDVWRDGQRIDKSREVELKRFKQESDLEKLLYNGTETYYLVLKNVQVGDIIDYSFSIE GANPVFGDKFDTWVRLGWSVPVAKVYARSLVPVDKGFTITRVGNSEFGSLTHRQVGAMEEYVFEDGRRAYDFDEKDQPSW FIPYPYINVSNYDNWQEVAQWALPLYPNSTSGRLFAKALEQLKALPSKEAQIMAAIKLSQQKIRYLGIENGIGSHAPRLP EQILEQGYGDCKDKSLLLATLLNQLGVEAYPALVSTVHREKLNEQLPGHSAFDHVIVNFFHQGIEYWVDPTVTEQGDALD SIVQSDLGYALVIKPESVWLSEMNVNNTNQITSSVEYHFKHQKEGDSTMKITTLYEGHQAERMRRYLTANSMDTVMGEYE DYYSRFYQGVYAAEEFEYQDDPQSNVVTMVETYVLENPWMEGDENTVRVEVTADIINNSLYAPEAQNRKTPYYVGSPLMI EQNIVVNLPDRLKLEEEAFSVKNDTYSLDVSIKGDGEGLLQVLAPVYKKINMNYRYQRKASSVSVDELPKYIKETKQANE FMTYYFSYAKGK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75013; Mature: 75013
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVWSVWLLLAASFSLFAGESLVLTPTPEWVVKQTFDKENRRDRVDGSIFLLVDKQYNF CCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC TLPKPMMYTHYATKSVNSKGVEDNSQISISFDPHYEKVLFHHVDVWRDGQRIDKSREVEL CCCCCEEEEEHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHCCCCHHHHH KRFKQESDLEKLLYNGTETYYLVLKNVQVGDIIDYSFSIEGANPVFGDKFDTWVRLGWSV HHHHHHHHHHHHHHCCCCEEEEEEECCEECCEEEEEEEECCCCCCCCCCCCHHEEECCCC PVAKVYARSLVPVDKGFTITRVGNSEFGSLTHRQVGAMEEYVFEDGRRAYDFDEKDQPSW CHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCE FIPYPYINVSNYDNWQEVAQWALPLYPNSTSGRLFAKALEQLKALPSKEAQIMAAIKLSQ ECCCCEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH QKIRYLGIENGIGSHAPRLPEQILEQGYGDCKDKSLLLATLLNQLGVEAYPALVSTVHRE HHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH KLNEQLPGHSAFDHVIVNFFHQGIEYWVDPTVTEQGDALDSIVQSDLGYALVIKPESVWL HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEE SEMNVNNTNQITSSVEYHFKHQKEGDSTMKITTLYEGHQAERMRRYLTANSMDTVMGEYE EECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHH DYYSRFYQGVYAAEEFEYQDDPQSNVVTMVETYVLENPWMEGDENTVRVEVTADIINNSL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCC YAPEAQNRKTPYYVGSPLMIEQNIVVNLPDRLKLEEEAFSVKNDTYSLDVSIKGDGEGLL CCCCCCCCCCCEEECCCEEEECCEEEECCHHCEEHHHHHCCCCCEEEEEEEEECCCHHHH QVLAPVYKKINMNYRYQRKASSVSVDELPKYIKETKQANEFMTYYFSYAKGK HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFVWSVWLLLAASFSLFAGESLVLTPTPEWVVKQTFDKENRRDRVDGSIFLLVDKQYNF CCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC TLPKPMMYTHYATKSVNSKGVEDNSQISISFDPHYEKVLFHHVDVWRDGQRIDKSREVEL CCCCCEEEEEHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHCCCCHHHHH KRFKQESDLEKLLYNGTETYYLVLKNVQVGDIIDYSFSIEGANPVFGDKFDTWVRLGWSV HHHHHHHHHHHHHHCCCCEEEEEEECCEECCEEEEEEEECCCCCCCCCCCCHHEEECCCC PVAKVYARSLVPVDKGFTITRVGNSEFGSLTHRQVGAMEEYVFEDGRRAYDFDEKDQPSW CHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCE FIPYPYINVSNYDNWQEVAQWALPLYPNSTSGRLFAKALEQLKALPSKEAQIMAAIKLSQ ECCCCEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH QKIRYLGIENGIGSHAPRLPEQILEQGYGDCKDKSLLLATLLNQLGVEAYPALVSTVHRE HHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH KLNEQLPGHSAFDHVIVNFFHQGIEYWVDPTVTEQGDALDSIVQSDLGYALVIKPESVWL HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEE SEMNVNNTNQITSSVEYHFKHQKEGDSTMKITTLYEGHQAERMRRYLTANSMDTVMGEYE EECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHH DYYSRFYQGVYAAEEFEYQDDPQSNVVTMVETYVLENPWMEGDENTVRVEVTADIINNSL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCC YAPEAQNRKTPYYVGSPLMIEQNIVVNLPDRLKLEEEAFSVKNDTYSLDVSIKGDGEGLL CCCCCCCCCCCEEECCCEEEECCEEEECCHHCEEHHHHHCCCCCEEEEEEEEECCCHHHH QVLAPVYKKINMNYRYQRKASSVSVDELPKYIKETKQANEFMTYYFSYAKGK HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA