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The map label for this gene is flgH

Identifier: 37679150

GI number: 37679150

Start: 963855

End: 964634

Strand: Direct

Name: flgH

Synonym: VV0966

Alternate gene names: 37679150

Gene position: 963855-964634 (Clockwise)

Preceding gene: 37679149

Following gene: 37679151

Centisome position: 28.73

GC content: 48.97

Gene sequence:

>780_bases
ATGAAACGCATCAGTCTGATTGCTTTAGTCACCCTCATGAGTGGCTGTACCATGCTTGAGCCGATCGAAACCCCTGAAGT
GGTCAATGCGACGACAGTGGTAGATGCGGTTGAAGGGGATAAGTCGAAGGACGAGAGCTCGGGTATCGTCGATACCTTGC
GTGGACGTAGCGATCCCGTGGCAGGCGATCCTGCATGGGCTCCCATTCATCCGAAACAGCAGCCAGAGCACTACGCTGCG
GAAACGGGCTCTCTATTTAGCGTGAATCATTTGTCGAATCTTTATGATGACTCGAAGCCTCGCGGCGTCGGTGACATCAT
TACCGTCACTCTGGATGAAAAAACCAATGCTTCCAAAAGTGCCAATGCGGACCTGTCGAAAAGCAACGATTCAAGCATGG
ATCCCCTTGAAGTGGGTGGGCAAGAGCTCAAAATCGACGGTAAGTATAATTTCTCTTACAACCTGACCAACTCAAACAAC
TTCACTGGCGATGCGTCGGCAAAACAGAGCAACAGCATCAGCGGTTACATCACCGTGGAAGTGATCGAAGTACTGGCCAA
TGGCAACCTCGTGATTCGTGGTGAGAAGTGGCTGACGCTGAATACGGGTGATGAGTACATTCGCCTCAGTGGCACAATTC
GTCCTGATGATATTAGTTTTGACAACACTATTGCGTCAAATCGCGTTTCTAACGCAAGAATTCAATATTCTGGTACCGGG
ACACAACAAGATATGCAAGAGCCTGGATTCTTGGCACGATTCTTTAATGTCTCTCTATAA

Upstream 100 bases:

>100_bases
ATGAATTCAAAAGTCATCTCATCGGTCGATAAGATGATGAGTTTTGTTAACCAGCAGCTTTAAGCGCTGGTTAGCTAAAC
GAGTAGGAGAGAATATCGCC

Downstream 100 bases:

>100_bases
GCGGCAAAGCCGATGGCAATTTGACGGCTTGATCCTGCACTAGAGAAAGGTAAGTTAAGATGAAAAAGTTCACCCTACTG
TTGTTATGTTTTGTATTGCC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRISLIALVTLMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSDPVAGDPAWAPIHPKQQPEHYAA
ETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNASKSANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNN
FTGDASAKQSNSISGYITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSGTG
TQQDMQEPGFLARFFNVSL

Sequences:

>Translated_259_residues
MKRISLIALVTLMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSDPVAGDPAWAPIHPKQQPEHYAA
ETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNASKSANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNN
FTGDASAKQSNSISGYITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSGTG
TQQDMQEPGFLARFFNVSL
>Mature_259_residues
MKRISLIALVTLMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSDPVAGDPAWAPIHPKQQPEHYAA
ETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNASKSANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNN
FTGDASAKQSNSISGYITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSGTG
TQQDMQEPGFLARFFNVSL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=204, Percent_Identity=35.7843137254902, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 28013; Mature: 28013

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISLIALVTLMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSDPV
CCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHHCCCCCCC
AGDPAWAPIHPKQQPEHYAAETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNASKS
CCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
ANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNNFTGDASAKQSNSISGYITVE
CCCCCCCCCCCCCCHHHCCCEEEEEECEEEEEEEECCCCCCCCCCCCCCCCCCCEEEHHE
VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSGTG
EEHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEECCCC
TQQDMQEPGFLARFFNVSL
CHHHHHCCCCEEEEEECCC
>Mature Secondary Structure
MKRISLIALVTLMSGCTMLEPIETPEVVNATTVVDAVEGDKSKDESSGIVDTLRGRSDPV
CCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHHCCCCCCC
AGDPAWAPIHPKQQPEHYAAETGSLFSVNHLSNLYDDSKPRGVGDIITVTLDEKTNASKS
CCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
ANADLSKSNDSSMDPLEVGGQELKIDGKYNFSYNLTNSNNFTGDASAKQSNSISGYITVE
CCCCCCCCCCCCCCHHHCCCEEEEEECEEEEEEEECCCCCCCCCCCCCCCCCCCEEEHHE
VIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDISFDNTIASNRVSNARIQYSGTG
EEHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEECCCC
TQQDMQEPGFLARFFNVSL
CHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA