| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is flgI
Identifier: 37679151
GI number: 37679151
Start: 964694
End: 965785
Strand: Direct
Name: flgI
Synonym: VV0967
Alternate gene names: 37679151
Gene position: 964694-965785 (Clockwise)
Preceding gene: 37679150
Following gene: 37679152
Centisome position: 28.76
GC content: 49.18
Gene sequence:
>1092_bases ATGAAAAAGTTCACCCTACTGTTGTTATGTTTTGTATTGCCGATGACCTCGGCCTATGCGGCGCGTATTAAAGATGTTGC TCAGGTGGCAGGGGTAAGAAGCAACCAATTAGTAGGTTATGGTCTTGTCTCTGGTTTGCCTGGAACGGGTGAATCCACAC CGTTTACCGAGCAGAGTTTTGCCGCAATGCTACAAAACTTCGGCATTCAGTTGCCTGCGGGAACCAAACCAAAAATCAAA AACGTTGCCGCTGTAATGGTAACGGCAGAACTTCCTCCTTTTTCTAAACCCGGTCAACAGATTGATGTGACGGTCTCCTC TATTGGTAGTGCCAAGAGCTTACGTGGCGGTACCTTGCTGCAAACCTTCTTGAAAGGTTTGGATGGGCAAGTTTATGCCG TGGCACAAGGCAACTTAGTGGTGAGCGGTTTTAGCGCAGAAGGGGCGGATGGCTCTAAAATCGTCGGCAATAACCCAACC GTCGGTATTATCTCTAGCGGTGCCATGGTTGAGCGTGAAGTGCCAACCCCATTTGGCCGTGGCGACTTCATTACATTCAA CTTACTTGAATCTGATTTCACCACCGCACAACGCATGGCCGATGCCGTCAATAATTTCCTTGGTCCTCAAATGGCCTCTG CGGTCGATGCGACTTCGGTACGTGTGCGAGCACCCCGCGACATCAGTCAGCGTGTCGCCTTTCTTTCTGCCATTGAAAAT CTCGAGTTTGATCCAGCAGACGGCGCAGCCAAAATCATTGTTAACTCACGTACGGGTACCATTGTGGTGGGTAAACATGT TCGATTAAAACCTGCGGCCGTGACTCACGGTGGTATGACGGTTGCGATTAAAGAAAACTTGAGTGTGAGTCAGCCGAATG GTTTCTCGGGTGGCGAAACCGTTGTTGTTCCCAATTCAGATATTTCAGTGACCGAAGAACAAGGTAAGATGTTCAAATTT GAGCCGGGCTTAACCTTGGATGATCTTGTTCGCGCGGTTAACCAAGTCGGTGCTGCACCGTCAGATTTGATGGCCATTCT ACAAGCGCTTAAACAAGCGGGTGCTATCGAGGGACAACTGATCATCATCTGA
Upstream 100 bases:
>100_bases AGCCTGGATTCTTGGCACGATTCTTTAATGTCTCTCTATAAGCGGCAAAGCCGATGGCAATTTGACGGCTTGATCCTGCA CTAGAGAAAGGTAAGTTAAG
Downstream 100 bases:
>100_bases TCGGTTTGGAGGCAATATGATTAACAATCCAAACGACATCGGCTTTATTCACGACATTAGCAATCTTGATAAGCTACGTC AGCAAGCCGTGAACGATAAA
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein 2 [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKKFTLLLLCFVLPMTSAYAARIKDVAQVAGVRSNQLVGYGLVSGLPGTGESTPFTEQSFAAMLQNFGIQLPAGTKPKIK NVAAVMVTAELPPFSKPGQQIDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAEGADGSKIVGNNPT VGIISSGAMVEREVPTPFGRGDFITFNLLESDFTTAQRMADAVNNFLGPQMASAVDATSVRVRAPRDISQRVAFLSAIEN LEFDPADGAAKIIVNSRTGTIVVGKHVRLKPAAVTHGGMTVAIKENLSVSQPNGFSGGETVVVPNSDISVTEEQGKMFKF EPGLTLDDLVRAVNQVGAAPSDLMAILQALKQAGAIEGQLIII
Sequences:
>Translated_363_residues MKKFTLLLLCFVLPMTSAYAARIKDVAQVAGVRSNQLVGYGLVSGLPGTGESTPFTEQSFAAMLQNFGIQLPAGTKPKIK NVAAVMVTAELPPFSKPGQQIDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAEGADGSKIVGNNPT VGIISSGAMVEREVPTPFGRGDFITFNLLESDFTTAQRMADAVNNFLGPQMASAVDATSVRVRAPRDISQRVAFLSAIEN LEFDPADGAAKIIVNSRTGTIVVGKHVRLKPAAVTHGGMTVAIKENLSVSQPNGFSGGETVVVPNSDISVTEEQGKMFKF EPGLTLDDLVRAVNQVGAAPSDLMAILQALKQAGAIEGQLIII >Mature_363_residues MKKFTLLLLCFVLPMTSAYAARIKDVAQVAGVRSNQLVGYGLVSGLPGTGESTPFTEQSFAAMLQNFGIQLPAGTKPKIK NVAAVMVTAELPPFSKPGQQIDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAEGADGSKIVGNNPT VGIISSGAMVEREVPTPFGRGDFITFNLLESDFTTAQRMADAVNNFLGPQMASAVDATSVRVRAPRDISQRVAFLSAIEN LEFDPADGAAKIIVNSRTGTIVVGKHVRLKPAAVTHGGMTVAIKENLSVSQPNGFSGGETVVVPNSDISVTEEQGKMFKF EPGLTLDDLVRAVNQVGAAPSDLMAILQALKQAGAIEGQLIII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=367, Percent_Identity=45.7765667574932, Blast_Score=296, Evalue=2e-81,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 37921; Mature: 37921
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFTLLLLCFVLPMTSAYAARIKDVAQVAGVRSNQLVGYGLVSGLPGTGESTPFTEQSF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCCHHHH AAMLQNFGIQLPAGTKPKIKNVAAVMVTAELPPFSKPGQQIDVTVSSIGSAKSLRGGTLL HHHHHHCCEECCCCCCCCHHCEEEEEEEECCCCCCCCCCEEEEEHHHCCCCHHCCCHHHH QTFLKGLDGQVYAVAQGNLVVSGFSAEGADGSKIVGNNPTVGIISSGAMVEREVPTPFGR HHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCC GDFITFNLLESDFTTAQRMADAVNNFLGPQMASAVDATSVRVRAPRDISQRVAFLSAIEN CCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC LEFDPADGAAKIIVNSRTGTIVVGKHVRLKPAAVTHGGMTVAIKENLSVSQPNGFSGGET CCCCCCCCCEEEEEECCCCEEEECCCEEECCCEEECCCEEEEEECCCCCCCCCCCCCCCE VVVPNSDISVTEEQGKMFKFEPGLTLDDLVRAVNQVGAAPSDLMAILQALKQAGAIEGQL EEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE III EEC >Mature Secondary Structure MKKFTLLLLCFVLPMTSAYAARIKDVAQVAGVRSNQLVGYGLVSGLPGTGESTPFTEQSF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCCHHHH AAMLQNFGIQLPAGTKPKIKNVAAVMVTAELPPFSKPGQQIDVTVSSIGSAKSLRGGTLL HHHHHHCCEECCCCCCCCHHCEEEEEEEECCCCCCCCCCEEEEEHHHCCCCHHCCCHHHH QTFLKGLDGQVYAVAQGNLVVSGFSAEGADGSKIVGNNPTVGIISSGAMVEREVPTPFGR HHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCC GDFITFNLLESDFTTAQRMADAVNNFLGPQMASAVDATSVRVRAPRDISQRVAFLSAIEN CCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHC LEFDPADGAAKIIVNSRTGTIVVGKHVRLKPAAVTHGGMTVAIKENLSVSQPNGFSGGET CCCCCCCCCEEEEEECCCCEEEECCCEEECCCEEECCCEEEEEECCCCCCCCCCCCCCCE VVVPNSDISVTEEQGKMFKFEPGLTLDDLVRAVNQVGAAPSDLMAILQALKQAGAIEGQL EEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE III EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]