| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678979
Identifier: 37678979
GI number: 37678979
Start: 799597
End: 801339
Strand: Direct
Name: 37678979
Synonym: VV0795
Alternate gene names: NA
Gene position: 799597-801339 (Clockwise)
Preceding gene: 37678978
Following gene: 37678984
Centisome position: 23.84
GC content: 47.91
Gene sequence:
>1743_bases ATGTTAACCAGTCCATTTCGATTACCCAGATATACGCCTTTCGGCTTGGGAGAATCACTGGTTGAGTGGATGACGGGTTT AGCAAAACTTGATGGCTTTTATCAAGCTCGTCCGAACACTCAAAGCAGTTTTGAATTTATGCGCTATACCCTCTCTGCGC TGAACATTGATTATCGTGTCGAACAGGGCTTAGTCACACACATTCCTGAGCAAGGGCCTGTTGTGATCGTGGCTAATCAT CCGCTTGGGGCAATTGAAGGTGTGATCTTAGCTGATTTGGTCGGCGCAGTACGTTCAGATGTGAAGGTGCTGGCCAATCA ACTGCTCAAGCGCTTGCCTGAAATTGATGAGTTGTTTATCGGTATCGATGTTTTTGCTGGACGCAGTGCCATGCGTATGA ATGCCAACGCAGTGCGAGAAGCTCATCGTCATTTGGCACAAGGAGGCGTGTTGATAGTCTTTCCTGCCGGAGAAGTTTCT ACCTATCGAGAGGGGAGTGAAACTCTATCCGATATTGAGTGGAGCCAATCGGTGGCGAAGTTTGTCACTCGTGCCAAAGC CACGACGATCCCCATTTACATCAATGGCCAAAATAGTGCGCTGTTTTACAAAGCCGGAAAAGTACACCCTCTGCTGCGCA CCGCTTTACTTGGTCGAGAGTTGCTGAATAAGAGCGCTTCTACGATCGCCATTTCGATCGGAAACCCCATTCCTTATTCC GAGGTGAAAGAGTTTGAACATGAGCGAGATATTGTCCATTACTTACGGCTCAATACGTATCTCATGGGCGCAGATCGAGA ACCACCGTTTGCCTTTTGCTCACCAGTGTACACGCAACCGCTCATCCAACCGGTTGAGAAAGCTTTGTTGGAACTCGATC TGGCGGCTCTGCCTTCAAACGCGTTACTGCTAGAGCAAGGTGATTACGCCGTCTACTGTGTGGAATCGACAGCGATCCCT AATATGCTCAGGGAAATTGGCCGAGTTCGAGAAGAAAGTTTTCGAGAAGTGGGAGAGGGCAGTGGCTTGGCGTGCGATTT GGATTTCTTCGATGCCAGTTATCGACAATTGTTTGTTTGGAATCACAGTGAAGGTGAGTTGGTAGGGGCTTATCGATTAG GGCTGGTGGATGAACTTACCGTAGAGAAAGGCCTTGATGGGCTCTATTCGCGAAGCTTGTTTCAATACGACGAAGCCTTT CTCAATACGCTGGATAAAAGTATTGAATTGGGGCGCTCAGTGGTTGCCATCAAATACCAGCGCAGTTTGAATGCTTTGCT GCTTTTGTGGAAAGGCATCGCTGCGTTTGTGTCGCAACATCCTCAATACACCCATCTGTTTGGCCCTGTCAGCATCAGTA ATGACTACAGTTCAGTGGCTAGACAACTAATGGCGGCCACGCTTTCGATTCATCATTACGATCAAGAAAAAGCGCGATTA GTGACACCCATCACTCCATTAAAAACAAGCACATCGCCTTTTTGGCACAAGAATTTACTCTCGGCATTGGCCAGTGTTTC AGCGTTATCTAAAGTGATTTCGCGTTTGGAAAAAGGCCCTGGCCTACCAGTATTGCTACGCCAATATTTAGGCATGAAGG GGAAACTGGTGTGTTTTAACGTGGACCCTGCCTTTAACCACGCGCTGGATGGTTTGATCGTGGTGAACTTGAAACAAGTA CCGCTGAAAACGTTAGCCAAATATATGGGCAAGGAAGCCGCCCAGCGCTACCTTGAGCAATAA
Upstream 100 bases:
>100_bases AGCACCGCAGCGACACATCACACAAGCCGATGCGAATTGGCCAGCGATGCTGAAGTGATAGCTGTTTGATGTTGGTTTTA ACTCGTGTGGAGAGAGAAGT
Downstream 100 bases:
>100_bases GGTTTACAAAAATAGAAGAGACTTAATAAAGAAAGGCTAACTCTTTGAGTTAGCCTTTCTATTGCTGATCTGCTTTCAAA TAAATAGCGTTGTTCGCAAG
Product: putative hemolysin
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Family Protein; Acyltransferase Domain-Containing Protein; Hemolysin A; Acyltransferase; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; DNA Polymerase III Subunit Alpha; Acetyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin; Sulfolipid Biosynthesis Protein SqdA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MLTSPFRLPRYTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRMNANAVREAHRHLAQGGVLIVFPAGEVS TYREGSETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSASTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGADREPPFAFCSPVYTQPLIQPVEKALLELDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDFFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPITPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ
Sequences:
>Translated_580_residues MLTSPFRLPRYTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRMNANAVREAHRHLAQGGVLIVFPAGEVS TYREGSETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSASTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGADREPPFAFCSPVYTQPLIQPVEKALLELDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDFFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPITPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ >Mature_580_residues MLTSPFRLPRYTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRVEQGLVTHIPEQGPVVIVANH PLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFIGIDVFAGRSAMRMNANAVREAHRHLAQGGVLIVFPAGEVS TYREGSETLSDIEWSQSVAKFVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSASTIAISIGNPIPYS EVKEFEHERDIVHYLRLNTYLMGADREPPFAFCSPVYTQPLIQPVEKALLELDLAALPSNALLLEQGDYAVYCVESTAIP NMLREIGRVREESFREVGEGSGLACDLDFFDASYRQLFVWNHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAF LNTLDKSIELGRSVVAIKYQRSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL VTPITPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFNVDPAFNHALDGLIVVNLKQV PLKTLAKYMGKEAAQRYLEQ
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64432; Mature: 64432
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSPFRLPRYTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHH EQGLVTHIPEQGPVVIVANHPLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFI HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE GIDVFAGRSAMRMNANAVREAHRHLAQGGVLIVFPAGEVSTYREGSETLSDIEWSQSVAK EHHHHCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHH FVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSASTIAISIGNPIPYS HHHHHCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVKEFEHERDIVHYLRLNTYLMGADREPPFAFCSPVYTQPLIQPVEKALLELDLAALPSN HHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC ALLLEQGDYAVYCVESTAIPNMLREIGRVREESFREVGEGSGLACDLDFFDASYRQLFVW CEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCEEEEEE NHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAFLNTLDKSIELGRSVVAIKYQ ECCCCCEEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH RSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEE VTPITPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFN ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDPAFNHALDGLIVVNLKQVPLKTLAKYMGKEAAQRYLEQ CCHHHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure MLTSPFRLPRYTPFGLGESLVEWMTGLAKLDGFYQARPNTQSSFEFMRYTLSALNIDYRV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHH EQGLVTHIPEQGPVVIVANHPLGAIEGVILADLVGAVRSDVKVLANQLLKRLPEIDELFI HCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE GIDVFAGRSAMRMNANAVREAHRHLAQGGVLIVFPAGEVSTYREGSETLSDIEWSQSVAK EHHHHCCCCHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHH FVTRAKATTIPIYINGQNSALFYKAGKVHPLLRTALLGRELLNKSASTIAISIGNPIPYS HHHHHCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH EVKEFEHERDIVHYLRLNTYLMGADREPPFAFCSPVYTQPLIQPVEKALLELDLAALPSN HHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC ALLLEQGDYAVYCVESTAIPNMLREIGRVREESFREVGEGSGLACDLDFFDASYRQLFVW CEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCEEEEEE NHSEGELVGAYRLGLVDELTVEKGLDGLYSRSLFQYDEAFLNTLDKSIELGRSVVAIKYQ ECCCCCEEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH RSLNALLLLWKGIAAFVSQHPQYTHLFGPVSISNDYSSVARQLMAATLSIHHYDQEKARL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEE VTPITPLKTSTSPFWHKNLLSALASVSALSKVISRLEKGPGLPVLLRQYLGMKGKLVCFN ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEE VDPAFNHALDGLIVVNLKQVPLKTLAKYMGKEAAQRYLEQ CCHHHHHHCCCEEEEEECCCCHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA