| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678984
Identifier: 37678984
GI number: 37678984
Start: 805170
End: 806693
Strand: Direct
Name: 37678984
Synonym: VV0800
Alternate gene names: NA
Gene position: 805170-806693 (Clockwise)
Preceding gene: 37678979
Following gene: 37678985
Centisome position: 24.0
GC content: 39.24
Gene sequence:
>1524_bases TTGTATCTAGTGCGTGTTATTGAGTTTCTATCTGAGATTGGTCCCCTTTCTCCTGAGGGACGATACTTATTTTTAGCGAT AATCTTTGAGCAATTGAATGGCAAGGAAAAGAGGATCGACGTATCCATTTCACGTCTTGGTGATAGTTTTGGAGTTTCCC ATAAGGTCGTTTCAGAATTGCTTAAATATCTTCAATCTCGCGACAATGTGGGGCAGGTTACAAAGGTAAGGCATGGGAAG CACGAGTTCACTTTTAATTCTGCCTATATCGACTCATTGACGGAAAAGGGTTTTCTTTCCGTCAATGAGGTGTTTGTTGA GGTGTTTTCACCAGACGTTAAGATCGTCCTAAAGGAAAAAGAGCTAAAACTTAGGCCTTCAAACCTTCTTTTGATCGGGA TATTTATCCTTCATGCAAATGAATTGGGTTTTATTCAATCATCCGCAACTGGAAGTGAAGAGCTATTGAGTGAAGGGAAA ATACGACGCTTAATGGGGGGTATTAATCAAAGCCGTCTGAAATCTCAACTAGCAACACTGCACAAGATTGGGTTTATCAA AAAGGAGGCCGTTGGTGGCGTATCTCCTATCTACTTCGGTAAGTTTGAAAAACGATATCAGATCGATTTGGGGTTTCTGT CGCTGCGGGAAGCCTCAAGTGATGACTTATTTGTTGATGAAACAGAAAGAATTGTCAGCGACTTAATGTATGAGACTCCT GAGTGTTACCTAACTTATAGAATGTTTAAAAAGTGCTCTTTGAAGTATGAATTTGAATTTGAACTTCCTTTCAAGCTCTC TTTGTTGATTCAAAAAAAAGCAGACATACACTGTGAGCGCCCCAGAAAAGAAAGCATAGAGACACGCAAAAGACTTAGAA AAACTAAACCTGAACTTTTTATGGATACATATCTTGTTGATGGCTTTGACTTGCTAGGACTAGAGTTAGCCCCCTTTATT TATAGGGAAGGGCTCACTTTAGGAATTTTAGCTAAGTTAGAAACCTTGACGGCGTTGATACTGACAAAACATTGGTACGT CCTAACGAAGGAAACGTTCGATAAACTGGAAGAGTTACTTGCGTTAGATCCTGAAATTCAGCAACTCGTTCAGAAAGGTT CGATATTTACTCAAAAATACCTAAAGGAGCATGACGATCTTGAGCTGTTAGACCGCGTGTATTGTTTTTGGAAGAGCTGT TTGATTTCTCTTTCTTTAGGACTAGCAATATCGTTAGCGAAAGTGATTCGCGGGCATTGTGGTCAAGATGCTGAGTTAAG AATGATAGGCCTCTTGATACACGATTTTCAGCACTACTTAAAACAAGAGGCTCCGTTTTATCCTTCCTGTAATATTTCAG CATCATATTTTGTTGATGACAAATCTTACGATCTGAATGTCGTCAGTTCAAAATCCTATACCACGAAGTATATTACTGGT GGGAGGTCTTCCATTGATTTGCATGTTAAAACGTTAGAAAAAAAGGAGCGCACCTATTCGATTCTTGTAAAAGCCAATAA ATGA
Upstream 100 bases:
>100_bases TTTAAAACAATAATTTAAACATGTTTTAAATTTGTGATTAATGCGGTTTCAAATCTTGTGATGTTTTCTTATTATTGATT TATAAATAGGGTATATATGG
Downstream 100 bases:
>100_bases GGTTTGTGTACTTTATTTCAGACTATTATCATTGAATTAAATCTAGGGTTTTCTATCTATAATTGATTTAAGAGCTATGT CTCGCCAATCTGTTTAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MYLVRVIEFLSEIGPLSPEGRYLFLAIIFEQLNGKEKRIDVSISRLGDSFGVSHKVVSELLKYLQSRDNVGQVTKVRHGK HEFTFNSAYIDSLTEKGFLSVNEVFVEVFSPDVKIVLKEKELKLRPSNLLLIGIFILHANELGFIQSSATGSEELLSEGK IRRLMGGINQSRLKSQLATLHKIGFIKKEAVGGVSPIYFGKFEKRYQIDLGFLSLREASSDDLFVDETERIVSDLMYETP ECYLTYRMFKKCSLKYEFEFELPFKLSLLIQKKADIHCERPRKESIETRKRLRKTKPELFMDTYLVDGFDLLGLELAPFI YREGLTLGILAKLETLTALILTKHWYVLTKETFDKLEELLALDPEIQQLVQKGSIFTQKYLKEHDDLELLDRVYCFWKSC LISLSLGLAISLAKVIRGHCGQDAELRMIGLLIHDFQHYLKQEAPFYPSCNISASYFVDDKSYDLNVVSSKSYTTKYITG GRSSIDLHVKTLEKKERTYSILVKANK
Sequences:
>Translated_507_residues MYLVRVIEFLSEIGPLSPEGRYLFLAIIFEQLNGKEKRIDVSISRLGDSFGVSHKVVSELLKYLQSRDNVGQVTKVRHGK HEFTFNSAYIDSLTEKGFLSVNEVFVEVFSPDVKIVLKEKELKLRPSNLLLIGIFILHANELGFIQSSATGSEELLSEGK IRRLMGGINQSRLKSQLATLHKIGFIKKEAVGGVSPIYFGKFEKRYQIDLGFLSLREASSDDLFVDETERIVSDLMYETP ECYLTYRMFKKCSLKYEFEFELPFKLSLLIQKKADIHCERPRKESIETRKRLRKTKPELFMDTYLVDGFDLLGLELAPFI YREGLTLGILAKLETLTALILTKHWYVLTKETFDKLEELLALDPEIQQLVQKGSIFTQKYLKEHDDLELLDRVYCFWKSC LISLSLGLAISLAKVIRGHCGQDAELRMIGLLIHDFQHYLKQEAPFYPSCNISASYFVDDKSYDLNVVSSKSYTTKYITG GRSSIDLHVKTLEKKERTYSILVKANK >Mature_507_residues MYLVRVIEFLSEIGPLSPEGRYLFLAIIFEQLNGKEKRIDVSISRLGDSFGVSHKVVSELLKYLQSRDNVGQVTKVRHGK HEFTFNSAYIDSLTEKGFLSVNEVFVEVFSPDVKIVLKEKELKLRPSNLLLIGIFILHANELGFIQSSATGSEELLSEGK IRRLMGGINQSRLKSQLATLHKIGFIKKEAVGGVSPIYFGKFEKRYQIDLGFLSLREASSDDLFVDETERIVSDLMYETP ECYLTYRMFKKCSLKYEFEFELPFKLSLLIQKKADIHCERPRKESIETRKRLRKTKPELFMDTYLVDGFDLLGLELAPFI YREGLTLGILAKLETLTALILTKHWYVLTKETFDKLEELLALDPEIQQLVQKGSIFTQKYLKEHDDLELLDRVYCFWKSC LISLSLGLAISLAKVIRGHCGQDAELRMIGLLIHDFQHYLKQEAPFYPSCNISASYFVDDKSYDLNVVSSKSYTTKYITG GRSSIDLHVKTLEKKERTYSILVKANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58255; Mature: 58255
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLVRVIEFLSEIGPLSPEGRYLFLAIIFEQLNGKEKRIDVSISRLGDSFGVSHKVVSEL CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHH LKYLQSRDNVGQVTKVRHGKHEFTFNSAYIDSLTEKGFLSVNEVFVEVFSPDVKIVLKEK HHHHHCCCCCCCHHHHCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECC ELKLRPSNLLLIGIFILHANELGFIQSSATGSEELLSEGKIRRLMGGINQSRLKSQLATL CCEECCCCEEEEEEEEHCCCCCCCEECCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHH HKIGFIKKEAVGGVSPIYFGKFEKRYQIDLGFLSLREASSDDLFVDETERIVSDLMYETP HHHCCHHHHHCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCC ECYLTYRMFKKCSLKYEFEFELPFKLSLLIQKKADIHCERPRKESIETRKRLRKTKPELF HHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH MDTYLVDGFDLLGLELAPFIYREGLTLGILAKLETLTALILTKHWYVLTKETFDKLEELL HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH ALDPEIQQLVQKGSIFTQKYLKEHDDLELLDRVYCFWKSCLISLSLGLAISLAKVIRGHC CCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQDAELRMIGLLIHDFQHYLKQEAPFYPSCNISASYFVDDKSYDLNVVSSKSYTTKYITG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEC GRSSIDLHVKTLEKKERTYSILVKANK CCCEEEEEEEHHHHCCCEEEEEEEECC >Mature Secondary Structure MYLVRVIEFLSEIGPLSPEGRYLFLAIIFEQLNGKEKRIDVSISRLGDSFGVSHKVVSEL CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHH LKYLQSRDNVGQVTKVRHGKHEFTFNSAYIDSLTEKGFLSVNEVFVEVFSPDVKIVLKEK HHHHHCCCCCCCHHHHCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECC ELKLRPSNLLLIGIFILHANELGFIQSSATGSEELLSEGKIRRLMGGINQSRLKSQLATL CCEECCCCEEEEEEEEHCCCCCCCEECCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHH HKIGFIKKEAVGGVSPIYFGKFEKRYQIDLGFLSLREASSDDLFVDETERIVSDLMYETP HHHCCHHHHHCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCC ECYLTYRMFKKCSLKYEFEFELPFKLSLLIQKKADIHCERPRKESIETRKRLRKTKPELF HHHHHHHHHHHCCCEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH MDTYLVDGFDLLGLELAPFIYREGLTLGILAKLETLTALILTKHWYVLTKETFDKLEELL HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH ALDPEIQQLVQKGSIFTQKYLKEHDDLELLDRVYCFWKSCLISLSLGLAISLAKVIRGHC CCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQDAELRMIGLLIHDFQHYLKQEAPFYPSCNISASYFVDDKSYDLNVVSSKSYTTKYITG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEEC GRSSIDLHVKTLEKKERTYSILVKANK CCCEEEEEEEHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA