| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is pstC1 [H]
Identifier: 37678912
GI number: 37678912
Start: 733523
End: 735808
Strand: Direct
Name: pstC1 [H]
Synonym: VV0728
Alternate gene names: 37678912
Gene position: 733523-735808 (Clockwise)
Preceding gene: 37678909
Following gene: 37678913
Centisome position: 21.87
GC content: 47.2
Gene sequence:
>2286_bases TTGTATTATTTTCATATGGTTAATGTGATCTGTAATATAATTGTCATCTTAACGAAATATTATGTCAGCACGTCAAAAAG GGTAGAAAATTCGATGGCCAGAGCCGAGTTCACATTGCAGACCAGAGACAAGTCGAGATTGTTAAAAGATCGCCTAGTTC GTTTGGCTGTAACCAGTGGCGGTGTTGGGGTTTTGGCTGCCTTAGTGTTGATTTTTGTCTATTTAGCGATGGTGGTGATC CCACTCTTTTCGGACGCTAAACTAGAACCCAATAAACTCAGTATGCCTATTGCGACGAAGCCGCCTGTCGCGATTGCAGT TGATGATTATGGCCTTAGAGCATTGACTATTACCGAAGATGGTCGTCTAACGTTTTGGCAGCTAGATAGTGGTGAGGCAA TACTCGAAACACAAATCAGTGAGAATCCGACCGCTTTTGCCAAGAGTGTTTCTGCGTTAGACAGCTATGGCTTTGTTTCT CAGCAAGGGCTAGTGACGTTGTTTAAACCTCGTTTTAACAGTTCGCTGGCGAAGAGTGTTCAACGACCTGAGGTTGAGAT TTATTCCCCTAGCTTTGACTTTCGTCTTGCGGCGCAAGGCAGTGATATCGCACGGTTTGCGTTCAGTAACGTAGAACCTT CTCCAACGCTAACTTGGTTAACAAACGATGGACGAGTCCACGTTCGTTGGCAGCAAAGTGTGCAAGGTGAGTGGGTGCAA CGCGATTTCCAATTCGCAACCAGTTTTGATGCGGCATCGCAACTTCTTATAACGCCGGATGGAGAAACCCTCTACGTACG TTCTGGTTCTGAGTTGGTGGTGGCGAAGAAGCGTGATGAGCAATTTGTTGTGCGAGAGATTGTTGATCTCACCTTGGGTG ATCAGAAGCACTCAGTACGTCAAATAGACCTGCTTGCCGGAGCCTACTCTTTATTGGTCACTCACAATGATGGCCGAGTG TCGCAATGGTTTGATACCCGTCAGCAAAATCAGCGCAAATTGACGCACATTCGTGATTTTAAGTTAGCTTCAGAAGTGCA ATTCCTCTTGCCGGATACGCATCGTAAAGGCTTCTACAGTTTTTATACCAACGGAACGTTACAGAGCCACTACACCACCA GTGAAAAATTGGCTCTGTTTTTGCGCGCCTATCAACAAGCCCCGCAGATGGCGGCTATGTCGAATAACGAACAATACCTT TTAACGTATTTTCCAGATCGATTAACGCTGGCGACGGTGGACAACCCATACCCTGAAATTTCGCTATCATCGCTGTGGCA AAAGGTGTGGTATGAGGGTTATCCAGAGCCCGAGTTTGTTTGGCAATCCACTTCAGCAAGTGACGATTTTGAAGCGAAGT TCAGTATCGTTCCGATTGCTTTTGGTACCATTAAGGCTGCGCTGTTCGCCATGCTGTTTTCTGTTCCCATTGCTGTTCTT GGTGCCATCTATACCGGTTATTTTATGGCGCCGAAAATGCGTCGTATCGTTAAACCTTCCATTGAACTAATGGAAGCGAT GCCAACGGTCATTATCGGTTTTTTAGCCGGTTTATGGTTTGCTCCGATCGTTGAACAGCATCTGATTAGTGTGGTGCTAC TGATGGTTGTGCTACCTCTGAGTACCGTCTTCATTGGTGGACTCTGGACTCTGTTGCCAGCGACTATACGACATCGTATT CCTAATGGTTGGCATGCTCTGATCTTAATCCCGAGTATGGTACTGGTCGTCTCGCTCGGAATGCAGTTTGCTCCTGAATT GGAAGTGCTATTTTTTTCCGGCGATATTCGGTTATTTTTATCGCAGCATGGGATTGGTTTTGACCAGCGTAATGCAATGG TGGTGGGATTGGCGATGGGCTTTGCTGTGATTCCAACTATTTTTACCATAGCGGAGGATGCGATTTTCTCTGTGCCTAAG CATCTCTCTGATGGCTCGTTGGCGCTGGGCGCGACGGCGTGGCAAACGCTCACTCATGTGGTGATTCTCACCGCGAGCCC GGGGATTTTTTCTGCCATCATGATGGGGCTTGGGCGTGCTGTTGGGGAAACCATGATCGTCTTAATGGCGACTGGAAACA CGCCGCTAATGGATTGGAATATTTTGGAAGGGATGCGCACCTTATCAGCGACCATTGCGGTTGAGCTGCCGGAATCAGAA GTGGGCAGTTCGCACTTCCGATTATTGTTTTTAGCCGCCCTATTGCTGTTTGTTTTCACCTTCGCCGTCAACTCGCTGGC CGAATGGGTACGCCAAAGATTAAGAGATAAATATCGTGCGCTGTGA
Upstream 100 bases:
>100_bases TGGCCTGACGTTGATCATGTAATTAAAAATGGACTCAATAAGGAGGCACAGTATGTGTTTTTTGTTACAGATTTATTTCA TACCATGACTATCATAATAG
Downstream 100 bases:
>100_bases TCATAGTCGAATGTTGGGAGAGCTAGCGTGCTGAAATGGATTCGTTCAGGAGCGCCGTGGATTTGGCTGACAGGGGGAGC GGTCAGCATCAGCTTGCTTT
Product: ABC-type uncharacterized transport system, permease component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MYYFHMVNVICNIIVILTKYYVSTSKRVENSMARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVI PLFSDAKLEPNKLSMPIATKPPVAIAVDDYGLRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVS QQGLVTLFKPRFNSSLAKSVQRPEVEIYSPSFDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQ RDFQFATSFDAASQLLITPDGETLYVRSGSELVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRV SQWFDTRQQNQRKLTHIRDFKLASEVQFLLPDTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYL LTYFPDRLTLATVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVL GAIYTGYFMAPKMRRIVKPSIELMEAMPTVIIGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRI PNGWHALILIPSMVLVVSLGMQFAPELEVLFFSGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPK HLSDGSLALGATAWQTLTHVVILTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESE VGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQRLRDKYRAL
Sequences:
>Translated_761_residues MYYFHMVNVICNIIVILTKYYVSTSKRVENSMARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVI PLFSDAKLEPNKLSMPIATKPPVAIAVDDYGLRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVS QQGLVTLFKPRFNSSLAKSVQRPEVEIYSPSFDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQ RDFQFATSFDAASQLLITPDGETLYVRSGSELVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRV SQWFDTRQQNQRKLTHIRDFKLASEVQFLLPDTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYL LTYFPDRLTLATVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVL GAIYTGYFMAPKMRRIVKPSIELMEAMPTVIIGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRI PNGWHALILIPSMVLVVSLGMQFAPELEVLFFSGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPK HLSDGSLALGATAWQTLTHVVILTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESE VGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQRLRDKYRAL >Mature_761_residues MYYFHMVNVICNIIVILTKYYVSTSKRVENSMARAEFTLQTRDKSRLLKDRLVRLAVTSGGVGVLAALVLIFVYLAMVVI PLFSDAKLEPNKLSMPIATKPPVAIAVDDYGLRALTITEDGRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVS QQGLVTLFKPRFNSSLAKSVQRPEVEIYSPSFDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQ RDFQFATSFDAASQLLITPDGETLYVRSGSELVVAKKRDEQFVVREIVDLTLGDQKHSVRQIDLLAGAYSLLVTHNDGRV SQWFDTRQQNQRKLTHIRDFKLASEVQFLLPDTHRKGFYSFYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYL LTYFPDRLTLATVDNPYPEISLSSLWQKVWYEGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVL GAIYTGYFMAPKMRRIVKPSIELMEAMPTVIIGFLAGLWFAPIVEQHLISVVLLMVVLPLSTVFIGGLWTLLPATIRHRI PNGWHALILIPSMVLVVSLGMQFAPELEVLFFSGDIRLFLSQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPK HLSDGSLALGATAWQTLTHVVILTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESE VGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQRLRDKYRAL
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=343, Percent_Identity=24.198250728863, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 85023; Mature: 85023
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYFHMVNVICNIIVILTKYYVSTSKRVENSMARAEFTLQTRDKSRLLKDRLVRLAVTSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHEEEECCC GVGVLAALVLIFVYLAMVVIPLFSDAKLEPNKLSMPIATKPPVAIAVDDYGLRALTITED CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECC GRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVSQQGLVTLFKPRFNSSLAKSV CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHH QRPEVEIYSPSFDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQ CCCCEEEECCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCHHHH RDFQFATSFDAASQLLITPDGETLYVRSGSELVVAKKRDEQFVVREIVDLTLGDQKHSVR HHHHHHHCCCCCCEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH QIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQRKLTHIRDFKLASEVQFLLPDTHRKGFYS HHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEE FYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYLLTYFPDRLTLATVDNPYPEI EEECCEEECCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCC SLSSLWQKVWYEGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVL CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH GAIYTGYFMAPKMRRIVKPSIELMEAMPTVIIGFLAGLWFAPIVEQHLISVVLLMVVLPL HHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVFIGGLWTLLPATIRHRIPNGWHALILIPSMVLVVSLGMQFAPELEVLFFSGDIRLFL HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEE SQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLTHV ECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHEE VILTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESE EEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCHH VGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQRLRDKYRAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYYFHMVNVICNIIVILTKYYVSTSKRVENSMARAEFTLQTRDKSRLLKDRLVRLAVTSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHEEEECCC GVGVLAALVLIFVYLAMVVIPLFSDAKLEPNKLSMPIATKPPVAIAVDDYGLRALTITED CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECC GRLTFWQLDSGEAILETQISENPTAFAKSVSALDSYGFVSQQGLVTLFKPRFNSSLAKSV CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHH QRPEVEIYSPSFDFRLAAQGSDIARFAFSNVEPSPTLTWLTNDGRVHVRWQQSVQGEWVQ CCCCEEEECCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCHHHH RDFQFATSFDAASQLLITPDGETLYVRSGSELVVAKKRDEQFVVREIVDLTLGDQKHSVR HHHHHHHCCCCCCEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH QIDLLAGAYSLLVTHNDGRVSQWFDTRQQNQRKLTHIRDFKLASEVQFLLPDTHRKGFYS HHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEE FYTNGTLQSHYTTSEKLALFLRAYQQAPQMAAMSNNEQYLLTYFPDRLTLATVDNPYPEI EEECCEEECCCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCC SLSSLWQKVWYEGYPEPEFVWQSTSASDDFEAKFSIVPIAFGTIKAALFAMLFSVPIAVL CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH GAIYTGYFMAPKMRRIVKPSIELMEAMPTVIIGFLAGLWFAPIVEQHLISVVLLMVVLPL HHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVFIGGLWTLLPATIRHRIPNGWHALILIPSMVLVVSLGMQFAPELEVLFFSGDIRLFL HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEE SQHGIGFDQRNAMVVGLAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLTHV ECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHEE VILTASPGIFSAIMMGLGRAVGETMIVLMATGNTPLMDWNILEGMRTLSATIAVELPESE EEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEECCCHH VGSSHFRLLFLAALLLFVFTFAVNSLAEWVRQRLRDKYRAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]