| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is pstS [H]
Identifier: 37678909
GI number: 37678909
Start: 728828
End: 729781
Strand: Direct
Name: pstS [H]
Synonym: VV0725
Alternate gene names: 37678909
Gene position: 728828-729781 (Clockwise)
Preceding gene: 37678908
Following gene: 37678912
Centisome position: 21.73
GC content: 49.69
Gene sequence:
>954_bases ATGAAACGATGGTGGTTGAGTTTATTGTTGATGGGGGGAATAAGTGCGAGTGCTCAGGCATTGGATACACCATTGCAACC TTATAAAAAAATCCCCGGTGTTTCTGGGAATTTGTTATCTGTCGGCTCGGATACGCTTGCGGGGATGACCACGCTTTGGG TGGAAGAGTTTAAGGCGCTTTATCCGAACATTAATGCTCAGGTGCAAGCCTCGGGCTCCTCAACGGCGCCTCCCGCTCTG ACGGAACAAACGGCGCAGTTTGGCCCAATGAGCCGCCCAATGCGTTTAAGAGAAGTGGAAGCCTTTGAGCGAACTCATGG TTATAAACCTACGGCGTTGCGAGTTGCGATTGATGCCATCGGTATTTTTGTTCATCAAGACAATCCGGTTCAAGGTCTCA ACTTTCCGCAGTTGGACGCCATTTTCTCCGCGACTTTACGCTGTGGTGCAGAAGATTTTGTCAGCACGTGGGCGCAGCTT GGTATTGATGCGGAGTGGGCAAAGCGCAACTTTCAGCTCTTTGGGCGCAATTCGGTTTCTGGAACCTACGGCTACTTCAA AAAGCACGCCCTGTGTGGCGGCGATTTTAAAAGCCAAGTGAATGAGCAGCCGGGGTCGGCTTCGGTAGTGCAATCGGTGG CATCCACGCTCAGTGGCATAGGTTACTCTGGTGTGGGTTATCGTGTGGCGGGCGTGCGCCTACTTCCTATTGCTAAGCAA GGTAATGAGTTTGTTTATCCGAGTCGAGAAAATATTCTGACTGGCGATTACCCTCTTTCGCGTTATCTGTATGTGTATGT CAACAAGCATCCGAGTAAGGCTCTGAGCCCCATTGAAGCTGAGTTCATTAAATTTATCTATTCGGCACAAGGACAGGCGC TAGTAGAGAAAGATGGTTACGTGTCGATAACGGAAGAGTTTGCCAAGCAAGAGTTGGCAAAAGTCGGGTTATAA
Upstream 100 bases:
>100_bases AACATGCTTTGACTCATCACGACACTCATTTGGATATCCAAAGTAAAGTGGGCAGTGGCAGTAAGTTTTCATTTGTTTTA CCGGCAAAATTGGTGGCGAA
Downstream 100 bases:
>100_bases ACCCAATAAGGCCGCACTGCGGCCTTATTGTTTCGCGCTTTTCAGCGCCAGTTAGTCAAGCTCGAGCTGCCAGTTTACTT GTTGCCAGCGTTCTTGTTCA
Product: ABC-type phosphate transport system, periplasmic component
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKRWWLSLLLMGGISASAQALDTPLQPYKKIPGVSGNLLSVGSDTLAGMTTLWVEEFKALYPNINAQVQASGSSTAPPAL TEQTAQFGPMSRPMRLREVEAFERTHGYKPTALRVAIDAIGIFVHQDNPVQGLNFPQLDAIFSATLRCGAEDFVSTWAQL GIDAEWAKRNFQLFGRNSVSGTYGYFKKHALCGGDFKSQVNEQPGSASVVQSVASTLSGIGYSGVGYRVAGVRLLPIAKQ GNEFVYPSRENILTGDYPLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGYVSITEEFAKQELAKVGL
Sequences:
>Translated_317_residues MKRWWLSLLLMGGISASAQALDTPLQPYKKIPGVSGNLLSVGSDTLAGMTTLWVEEFKALYPNINAQVQASGSSTAPPAL TEQTAQFGPMSRPMRLREVEAFERTHGYKPTALRVAIDAIGIFVHQDNPVQGLNFPQLDAIFSATLRCGAEDFVSTWAQL GIDAEWAKRNFQLFGRNSVSGTYGYFKKHALCGGDFKSQVNEQPGSASVVQSVASTLSGIGYSGVGYRVAGVRLLPIAKQ GNEFVYPSRENILTGDYPLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGYVSITEEFAKQELAKVGL >Mature_317_residues MKRWWLSLLLMGGISASAQALDTPLQPYKKIPGVSGNLLSVGSDTLAGMTTLWVEEFKALYPNINAQVQASGSSTAPPAL TEQTAQFGPMSRPMRLREVEAFERTHGYKPTALRVAIDAIGIFVHQDNPVQGLNFPQLDAIFSATLRCGAEDFVSTWAQL GIDAEWAKRNFQLFGRNSVSGTYGYFKKHALCGGDFKSQVNEQPGSASVVQSVASTLSGIGYSGVGYRVAGVRLLPIAKQ GNEFVYPSRENILTGDYPLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGYVSITEEFAKQELAKVGL
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34590; Mature: 34590
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWWLSLLLMGGISASAQALDTPLQPYKKIPGVSGNLLSVGSDTLAGMTTLWVEEFKAL CCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YPNINAQVQASGSSTAPPALTEQTAQFGPMSRPMRLREVEAFERTHGYKPTALRVAIDAI CCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEE GIFVHQDNPVQGLNFPQLDAIFSATLRCGAEDFVSTWAQLGIDAEWAKRNFQLFGRNSVS EEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCEEEEECCCCC GTYGYFKKHALCGGDFKSQVNEQPGSASVVQSVASTLSGIGYSGVGYRVAGVRLLPIAKQ CHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEEEECC GNEFVYPSRENILTGDYPLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGY CCEEECCCCCCEEECCCCCCCEEEEEEECCCCHHCCHHHHHHHHHHHHCCCCEEECCCCC VSITEEFAKQELAKVGL EEHHHHHHHHHHHHCCC >Mature Secondary Structure MKRWWLSLLLMGGISASAQALDTPLQPYKKIPGVSGNLLSVGSDTLAGMTTLWVEEFKAL CCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YPNINAQVQASGSSTAPPALTEQTAQFGPMSRPMRLREVEAFERTHGYKPTALRVAIDAI CCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEE GIFVHQDNPVQGLNFPQLDAIFSATLRCGAEDFVSTWAQLGIDAEWAKRNFQLFGRNSVS EEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCEEEEECCCCC GTYGYFKKHALCGGDFKSQVNEQPGSASVVQSVASTLSGIGYSGVGYRVAGVRLLPIAKQ CHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEEEECC GNEFVYPSRENILTGDYPLSRYLYVYVNKHPSKALSPIEAEFIKFIYSAQGQALVEKDGY CCEEECCCCCCEEECCCCCCCEEEEEEECCCCHHCCHHHHHHHHHHHHCCCCEEECCCCC VSITEEFAKQELAKVGL EEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA