Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is catD [H]

Identifier: 37678750

GI number: 37678750

Start: 548406

End: 549224

Strand: Direct

Name: catD [H]

Synonym: VV0566

Alternate gene names: 37678750

Gene position: 548406-549224 (Clockwise)

Preceding gene: 37678749

Following gene: 37678752

Centisome position: 16.35

GC content: 47.99

Gene sequence:

>819_bases
ATGAAAACATTCGTCATAGATGACAAAAGCATGGCTTATCAAGATGTGGGTCAAGGTCCGGTCTTGTTATTTGGTCATAG
CTATTTGTGGGATAGCCAGATGTGGGCGCCACAAATTGAATTTTTAAGTCAGTCTTATCGTTGTATTGTGCCGGATTTAT
GGGCGCATGGGGAATCTGAGTCTGCACCAACTCGCTGCAACTCATTGGTGGATTACGCTCAACACCTGCTCGCGTTGATG
GATCATCTACAAATTGAGACGTTTTCTATTGTCGGTTTATCCGTTGGTGGGATGTGGGGAGCAGAACTGGTTTCACAAGC
ACCAGCACGAGTGACTTCTTTAGTCATGATGGACACCTTCATTGGTCTAGAGCCAGAAGTGACCCATCAGAAATACTTCG
CCATGTTGGATGCCATCGCGCAAAGCCAAATGGTGCCAGCACCGATTGTGGAAGCGGTGGTGCCGCTGTTTTTTGCCAAC
GATACGAAAGAGCAAAAACCGCAATTGGTTTCGGATTTCGAACAACGCTTAGCGTCACTTTCCGGTGAACGTGCGGTGGA
AGTGGCGAGAGTTGGACGTATGGTGTTTGGTCGTCGCGATGTGATTGAGGATGCGGAAAAATTTGCTTTGCCAACCTTGA
TCGCCGTTGGTCAGCAGGACAAACCTCGGCCAGTGTTTGAATCTTACTTGATGCACGATGTGATCACCGGCAGTCAATTG
GTGGAAATTCCTAACGCTGGCCACATCAGTAACTTAGAGCAGGTTGAGTTCGTTAACCAAATGCTTGAGACGTTTCTCGC
GGCAGTTTACGCCCAGTAA

Upstream 100 bases:

>100_bases
TTAGGCGGCCGTTTTTTTAATTTGCTGCTTTGTATTCAACATGGAACTGAATGGCATCTTGTGTTGCCTATGTTAGGTTC
TGCTGATTTTAGGAAAAATA

Downstream 100 bases:

>100_bases
GCGAACGAAAATGGCCTCATGAGAGGCCATTTTCTATTTCTTTGACGTTTATCGTCGTCTCGTATTTCGCTTGTCGTCTC
TTATTTTGCTTACTGTGACT

Product: putative beta-ketoadipate enol-lactone hydrolase

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESESAPTRCNSLVDYAQHLLALM
DHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTFIGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFAN
DTKEQKPQLVSDFEQRLASLSGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQL
VEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ

Sequences:

>Translated_272_residues
MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESESAPTRCNSLVDYAQHLLALM
DHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTFIGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFAN
DTKEQKPQLVSDFEQRLASLSGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQL
VEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ
>Mature_272_residues
MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESESAPTRCNSLVDYAQHLLALM
DHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTFIGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFAN
DTKEQKPQLVSDFEQRLASLSGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQL
VEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 30325; Mature: 30325

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESE
CCEEEECCHHHHHHHCCCCCEEEEECCHHCCCCCCCHHHHHHCCCCCEECCHHHCCCCCC
SAPTRCNSLVDYAQHLLALMDHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFANDTKEQKPQLVSDFEQRLASL
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHC
SGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQL
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE
VEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESE
CCEEEECCHHHHHHHCCCCCEEEEECCHHCCCCCCCHHHHHHCCCCCEECCHHHCCCCCC
SAPTRCNSLVDYAQHLLALMDHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFANDTKEQKPQLVSDFEQRLASL
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHC
SGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQL
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE
VEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]