| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ilvI [H]
Identifier: 37678679
GI number: 37678679
Start: 480810
End: 482534
Strand: Direct
Name: ilvI [H]
Synonym: VV0495
Alternate gene names: 37678679
Gene position: 480810-482534 (Clockwise)
Preceding gene: 37678678
Following gene: 37678680
Centisome position: 14.33
GC content: 47.65
Gene sequence:
>1725_bases ATGACAGCAATGTTGTCAGGCGCAGAGATGGTTGTTCAATCTCTGATCGAAGAAAACGTAGAGCAAATTTTTGGTTATCC CGGTGGTTCAGTACTGGATATTTATGATGCTCTTCACGCCAAAACTGAACAAATCAAGCATGTATTAGTTCGTCATGAAC AAGCCGCGACCCACATGGCTGATGGTTATGCTCGTGCCACAGGCAAACCTGGCGTTGTCCTAGTCTGTTCAGGACCTGGC GCAACGAACACCATCACCGGAATTGCCACGGCTTACATGGATTCCATCCCGATGATCGTTATTTCAGGAAACGTACCCAA TAGCTTAATTGGTAATGATGCTTTCCAAGAGTGCGATATCGTTGGTGTTTCTCGCCCTGTGGTTAAACATAGTTTCCTCG TTAAGCGTGCGGAAGACATTCCAGAGACCATCAAGAAAGCATTTTACATTGCCACGACAGGTCGCCCTGGCCCTGTGGTG ATCGACTTGCCAAAAGATGTGATGAACCCGCTGATCAAACTGCCTTATGAATATCCTAAGTCAATCAGCATGCGGTCATA CAAACCAACCACTTCGGGCCATAAAGGCCAAATCAAGAAAGCGCTAAAGGCATTACTTGAAGCGAAGAAGCCCGTTCTTT ATATCGGTGGTGGAGCGATTATCTCAGGTGCGCATGAGTCGATCCTCAAGCTGGCTGAAACATTAAATTTGCCCGTTGTA AGCACACTAATGGGGCTCGGTGCTTTCCCGGGGACCCACAAAAACGCTCTAGGCATGCTCGGCATGCATGGTAAATATGA AGCCAATATGGCGATGCATAACGCCGATCTTATTTTTGGTGTTGGGGTACGTTTTGATGACCGTACCACCAACAACTTAG AAAAATACTGCCCTAATGCGAAGATCATGCACATCGATATCGACCCTTCTTCGATCTCGAAGAATGTCAAAGTTGACCTA CCCATCGTGGGGTCAGCGGAGCAAGTGCTTGAGACCATGGTGACACTTCTTGAAGAGCAAGGCGCTGAAAACGATACGCA AGCCTTAGCGAGCTGGTGGGATGAAATTGAAGGCTGGAAAGCACGAGATTGCCTCGCCTACGACACCTCTTCGGAGCGCA TCAAGCCACAACAAGTGATCGAGACACTGCATAAGCTGACCAATGGGGATGCTTATGTTGCGTCAGATGTAGGCCAGCAT CAAATGTTTGCCGCGCTTTACTACCCGTTCAACAAACCGCGCCGTTGGATCAATTCTGGTGGTCTAGGCACGATGGGCTT TGGTTTGCCCGCTGGTATGGGGGTGAAATTCGCTATGCCAGAAGAAGAAGTGGTGGTGGTGACGGGGGATGGCAGTATCC AAATGAACATTCAAGAACTGTCGACTGCCATGCAATATGACATTCCGGTCAAAATTATCAACTTGAATAACCGTTTCCTA GGGATGGTGAAACAGTGGCAAGACATTATCTATCAAGGTCGCCACTCTAACTCATACATGAGTTCTGTTCCTGATTTTGC AGCCATTGCAGAAGCTTATGGCCATGTAGGTATTCGCATTGAAACCCCCGATCAACTCGAGTCAGAGCTTAAACGCGCCC TCGACATGAAAGATCGCTTGGTGTTTGTCGATATCAATGTGGATGAAACTGAGCACGTCTACCCAATGCAAATCAAAGGC GAAGGCATGGACAAAATGTGGCTAAGCAAAACGGAGAGAACTTAA
Upstream 100 bases:
>100_bases TGAAGTTTTTTCGAATTAGGCTACAAATAAGCCCTAAACTATGTAAAACCAGCCCATTAGATTGACCTTATTTAATGGAA ACTGGCTAAGGAGAAGCACT
Downstream 100 bases:
>100_bases TATGAGACACATTATTTCGTTGTTAATGGAAAACCAACCGGGTGCCTTGTCTCGTGTGGTAGGGCTGTTCTCTCAGCGTG GCTATAACATTGAATCGTTG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MTAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTEQIKHVLVRHEQAATHMADGYARATGKPGVVLVCSGPG ATNTITGIATAYMDSIPMIVISGNVPNSLIGNDAFQECDIVGVSRPVVKHSFLVKRAEDIPETIKKAFYIATTGRPGPVV IDLPKDVMNPLIKLPYEYPKSISMRSYKPTTSGHKGQIKKALKALLEAKKPVLYIGGGAIISGAHESILKLAETLNLPVV STLMGLGAFPGTHKNALGMLGMHGKYEANMAMHNADLIFGVGVRFDDRTTNNLEKYCPNAKIMHIDIDPSSISKNVKVDL PIVGSAEQVLETMVTLLEEQGAENDTQALASWWDEIEGWKARDCLAYDTSSERIKPQQVIETLHKLTNGDAYVASDVGQH QMFAALYYPFNKPRRWINSGGLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFL GMVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLESELKRALDMKDRLVFVDINVDETEHVYPMQIKG EGMDKMWLSKTERT
Sequences:
>Translated_574_residues MTAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTEQIKHVLVRHEQAATHMADGYARATGKPGVVLVCSGPG ATNTITGIATAYMDSIPMIVISGNVPNSLIGNDAFQECDIVGVSRPVVKHSFLVKRAEDIPETIKKAFYIATTGRPGPVV IDLPKDVMNPLIKLPYEYPKSISMRSYKPTTSGHKGQIKKALKALLEAKKPVLYIGGGAIISGAHESILKLAETLNLPVV STLMGLGAFPGTHKNALGMLGMHGKYEANMAMHNADLIFGVGVRFDDRTTNNLEKYCPNAKIMHIDIDPSSISKNVKVDL PIVGSAEQVLETMVTLLEEQGAENDTQALASWWDEIEGWKARDCLAYDTSSERIKPQQVIETLHKLTNGDAYVASDVGQH QMFAALYYPFNKPRRWINSGGLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFL GMVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLESELKRALDMKDRLVFVDINVDETEHVYPMQIKG EGMDKMWLSKTERT >Mature_573_residues TAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTEQIKHVLVRHEQAATHMADGYARATGKPGVVLVCSGPGA TNTITGIATAYMDSIPMIVISGNVPNSLIGNDAFQECDIVGVSRPVVKHSFLVKRAEDIPETIKKAFYIATTGRPGPVVI DLPKDVMNPLIKLPYEYPKSISMRSYKPTTSGHKGQIKKALKALLEAKKPVLYIGGGAIISGAHESILKLAETLNLPVVS TLMGLGAFPGTHKNALGMLGMHGKYEANMAMHNADLIFGVGVRFDDRTTNNLEKYCPNAKIMHIDIDPSSISKNVKVDLP IVGSAEQVLETMVTLLEEQGAENDTQALASWWDEIEGWKARDCLAYDTSSERIKPQQVIETLHKLTNGDAYVASDVGQHQ MFAALYYPFNKPRRWINSGGLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFLG MVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLESELKRALDMKDRLVFVDINVDETEHVYPMQIKGE GMDKMWLSKTERT
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=599, Percent_Identity=26.7111853088481, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI21361361, Length=507, Percent_Identity=25.6410256410256, Blast_Score=149, Evalue=6e-36, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=72.4258289703316, Blast_Score=897, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=563, Percent_Identity=40.1420959147425, Blast_Score=423, Evalue=1e-119, Organism=Escherichia coli, GI1786717, Length=542, Percent_Identity=33.5793357933579, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI1787096, Length=559, Percent_Identity=29.695885509839, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788716, Length=574, Percent_Identity=24.390243902439, Blast_Score=176, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17531299, Length=548, Percent_Identity=26.2773722627737, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17531301, Length=548, Percent_Identity=26.2773722627737, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17542570, Length=524, Percent_Identity=27.0992366412214, Blast_Score=154, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323755, Length=582, Percent_Identity=41.9243986254296, Blast_Score=449, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6320816, Length=555, Percent_Identity=24.6846846846847, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323163, Length=488, Percent_Identity=22.9508196721311, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI19922626, Length=599, Percent_Identity=25.2086811352254, Blast_Score=182, Evalue=4e-46,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62988; Mature: 62857
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTEQIKHVLVRHEQAATHMA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGYARATGKPGVVLVCSGPGATNTITGIATAYMDSIPMIVISGNVPNSLIGNDAFQECDI CCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHCCE VGVSRPVVKHSFLVKRAEDIPETIKKAFYIATTGRPGPVVIDLPKDVMNPLIKLPYEYPK EECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCC SISMRSYKPTTSGHKGQIKKALKALLEAKKPVLYIGGGAIISGAHESILKLAETLNLPVV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEECCHHHHHHHHHHHCCCHHH STLMGLGAFPGTHKNALGMLGMHGKYEANMAMHNADLIFGVGVRFDDRTTNNLEKYCPNA HHHHHCCCCCCCCCCCHHCCCCCCCEECCEEEECCCEEEEECEEECCCCCCCHHHHCCCC KIMHIDIDPSSISKNVKVDLPIVGSAEQVLETMVTLLEEQGAENDTQALASWWDEIEGWK EEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ARDCLAYDTSSERIKPQQVIETLHKLTNGDAYVASDVGQHQMFAALYYPFNKPRRWINSG CCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHEEEEEECCCCCCHHHHCCC GLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFL CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEECCCHHH GMVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLESELKRALDMKDRL HHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCE VFVDINVDETEHVYPMQIKGEGMDKMWLSKTERT EEEEECCCCCCCEEEEEECCCCCCHHHHHCCCCC >Mature Secondary Structure TAMLSGAEMVVQSLIEENVEQIFGYPGGSVLDIYDALHAKTEQIKHVLVRHEQAATHMA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGYARATGKPGVVLVCSGPGATNTITGIATAYMDSIPMIVISGNVPNSLIGNDAFQECDI CCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHCCE VGVSRPVVKHSFLVKRAEDIPETIKKAFYIATTGRPGPVVIDLPKDVMNPLIKLPYEYPK EECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCC SISMRSYKPTTSGHKGQIKKALKALLEAKKPVLYIGGGAIISGAHESILKLAETLNLPVV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEECCHHHHHHHHHHHCCCHHH STLMGLGAFPGTHKNALGMLGMHGKYEANMAMHNADLIFGVGVRFDDRTTNNLEKYCPNA HHHHHCCCCCCCCCCCHHCCCCCCCEECCEEEECCCEEEEECEEECCCCCCCHHHHCCCC KIMHIDIDPSSISKNVKVDLPIVGSAEQVLETMVTLLEEQGAENDTQALASWWDEIEGWK EEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ARDCLAYDTSSERIKPQQVIETLHKLTNGDAYVASDVGQHQMFAALYYPFNKPRRWINSG CCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHEEEEEECCCCCCHHHHCCC GLGTMGFGLPAGMGVKFAMPEEEVVVVTGDGSIQMNIQELSTAMQYDIPVKIINLNNRFL CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEECCCHHH GMVKQWQDIIYQGRHSNSYMSSVPDFAAIAEAYGHVGIRIETPDQLESELKRALDMKDRL HHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCE VFVDINVDETEHVYPMQIKGEGMDKMWLSKTERT EEEEECCCCCCCEEEEEECCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]