Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678557

Identifier: 37678557

GI number: 37678557

Start: 383181

End: 383375

Strand: Direct

Name: 37678557

Synonym: VV0373

Alternate gene names: NA

Gene position: 383181-383375 (Clockwise)

Preceding gene: 37678556

Following gene: 37678558

Centisome position: 11.42

GC content: 50.26

Gene sequence:

>195_bases
TTGTCGTTGCTCTTGTTGTCTGTTGTGGCGAGTGCATTTCCAAACGCGGCACCTGGCGCGTGCGGACAAATGGTTTCCCG
TGTGCACGGGAATGACGGCTGGTGGTGTGGCGGCAATGTGCTGAGTGTTTATTTGAGAGAAGCGCTGTTGATGTGTCTTG
CCTCATCCTTTGATATTCCAACTTCTTCTTTATAA

Upstream 100 bases:

>100_bases
ACTTCTGTCTACTAGTCCCTTTCTGTCTCTTATCTTGTCATCCTCGCGAACGCGGGGACCCATCGTATAGCGAGTGTAGT
AGGTAGGTATTGCTACTTTA

Downstream 100 bases:

>100_bases
CTTCTGTCTATTAGCCTCTTTCTGTCTCTTATCTTGTCATCCTCGCGAACGCGGGGACCCATCGTATAGCGAGTGTTGTG
GGTAGGTATTACTACTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSLLLLSVVASAFPNAAPGACGQMVSRVHGNDGWWCGGNVLSVYLREALLMCLASSFDIPTSSL

Sequences:

>Translated_64_residues
MSLLLLSVVASAFPNAAPGACGQMVSRVHGNDGWWCGGNVLSVYLREALLMCLASSFDIPTSSL
>Mature_63_residues
SLLLLSVVASAFPNAAPGACGQMVSRVHGNDGWWCGGNVLSVYLREALLMCLASSFDIPTSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6686; Mature: 6555

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLLSVVASAFPNAAPGACGQMVSRVHGNDGWWCGGNVLSVYLREALLMCLASSFDIP
CHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCC
TSSL
CCCC
>Mature Secondary Structure 
SLLLLSVVASAFPNAAPGACGQMVSRVHGNDGWWCGGNVLSVYLREALLMCLASSFDIP
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCC
TSSL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA