Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is epsM [H]

Identifier: 37678546

GI number: 37678546

Start: 371227

End: 371955

Strand: Direct

Name: epsM [H]

Synonym: VV0362

Alternate gene names: 37678546

Gene position: 371227-371955 (Clockwise)

Preceding gene: 37678545

Following gene: 37678547

Centisome position: 11.07

GC content: 49.93

Gene sequence:

>729_bases
ATGGCCATGTCACCATCGCCCCGTTTACTGGGCAAGCGCAGTCAGGTAACTCTAATGAACACTGAATACCCGAGTGCATG
CTCACTTGGTGCATGCGCCATTCTCGGAGCCAGTGGCCACGGTAAAGTCGTTGCAGAAATCGCTGAGCTCAATGGTTATT
CTGAAATTCATTTTTATGACGATCGCTGGCCAGAATTACACAATATTGAGCATTGGAATGTAGTCGGCGATTCCGAAGCT
TTGCTTGCTAGCGTGCAGCAGTATGCTTGCGTTGCGGTTGCAATAGGTAATAATGCGATCCGATTAAATAAACATAAACA
GTTACTCGAGGTTGGCGCTAGAATGCCTTCATTGGTACATCCTAGGGCCGTTATTAGCGGTTATGCCACAATCGCAGAAG
GATGTGTTGTGATGGCGAATGCGGTCGTCAATCCCTTCGCGGTGCTCGGGCAAACATGCATTGTCAATACTGGCGCTGTT
GTCGAACATGATTGTCTATTGGCCGATGGTGTACACCTTTCGCCTAATTCTGCGATTGCAGGGAGTACTCAGCTCGGAGA
ATGCGCTTGGCTAGGCATCGGTGCTGTGACTCGGCAATTAGTCTCGGTGGGTGCAGGTGCGACCATTGGCGCAGGGGCCA
CGGTTATTGGTAATGTTGCCGCTAATACAGTCGTGATGGGCACGCCTGCCAAAATACAAATTACTAGAGATCTAGGAGCT
AGGTCCTAG

Upstream 100 bases:

>100_bases
CTTGATGTGTGGTATGTGGATAACCGTTCGTTTTGGCTCGATTTTAAAATACTATTACTGACAGTGAAAAAGGTGTTTGT
TAAAGAAGGCATCTCGGCAG

Downstream 100 bases:

>100_bases
GTAAGAGAAGGTACTAGGAAAAGCAGGTTCTAGGGAAGAGCTGGTTCTAGGAAGAGCAAAACCTAGAACCTAGCCCCTAG
AAACCTAGAAACCTAGAAAC

Product: putative acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAMSPSPRLLGKRSQVTLMNTEYPSACSLGACAILGASGHGKVVAEIAELNGYSEIHFYDDRWPELHNIEHWNVVGDSEA
LLASVQQYACVAVAIGNNAIRLNKHKQLLEVGARMPSLVHPRAVISGYATIAEGCVVMANAVVNPFAVLGQTCIVNTGAV
VEHDCLLADGVHLSPNSAIAGSTQLGECAWLGIGAVTRQLVSVGAGATIGAGATVIGNVAANTVVMGTPAKIQITRDLGA
RS

Sequences:

>Translated_242_residues
MAMSPSPRLLGKRSQVTLMNTEYPSACSLGACAILGASGHGKVVAEIAELNGYSEIHFYDDRWPELHNIEHWNVVGDSEA
LLASVQQYACVAVAIGNNAIRLNKHKQLLEVGARMPSLVHPRAVISGYATIAEGCVVMANAVVNPFAVLGQTCIVNTGAV
VEHDCLLADGVHLSPNSAIAGSTQLGECAWLGIGAVTRQLVSVGAGATIGAGATVIGNVAANTVVMGTPAKIQITRDLGA
RS
>Mature_241_residues
AMSPSPRLLGKRSQVTLMNTEYPSACSLGACAILGASGHGKVVAEIAELNGYSEIHFYDDRWPELHNIEHWNVVGDSEAL
LASVQQYACVAVAIGNNAIRLNKHKQLLEVGARMPSLVHPRAVISGYATIAEGCVVMANAVVNPFAVLGQTCIVNTGAVV
EHDCLLADGVHLSPNSAIAGSTQLGECAWLGIGAVTRQLVSVGAGATIGAGATVIGNVAANTVVMGTPAKIQITRDLGAR
S

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR013817
- InterPro:   IPR020019
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25033; Mature: 24902

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSPSPRLLGKRSQVTLMNTEYPSACSLGACAILGASGHGKVVAEIAELNGYSEIHFYD
CCCCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEHHHCCCCEEEEEEC
DRWPELHNIEHWNVVGDSEALLASVQQYACVAVAIGNNAIRLNKHKQLLEVGARMPSLVH
CCCCCCCCCCEEEEECCHHHHHHHHHHHEEEEEEECCCEEEECHHHHHHHHHHCCCCCCC
PRAVISGYATIAEGCVVMANAVVNPFAVLGQTCIVNTGAVVEHDCLLADGVHLSPNSAIA
CHHHHHHHHHHHHHHHEEHHHHHCHHHHHCCHHEEECCCEEECCEEEECCEEECCCCCCC
GSTQLGECAWLGIGAVTRQLVSVGAGATIGAGATVIGNVAANTVVMGTPAKIQITRDLGA
CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHEEECHHCCEEEECCCCEEEEECCCCC
RS
CC
>Mature Secondary Structure 
AMSPSPRLLGKRSQVTLMNTEYPSACSLGACAILGASGHGKVVAEIAELNGYSEIHFYD
CCCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEHHHCCCCEEEEEEC
DRWPELHNIEHWNVVGDSEALLASVQQYACVAVAIGNNAIRLNKHKQLLEVGARMPSLVH
CCCCCCCCCCEEEEECCHHHHHHHHHHHEEEEEEECCCEEEECHHHHHHHHHHCCCCCCC
PRAVISGYATIAEGCVVMANAVVNPFAVLGQTCIVNTGAVVEHDCLLADGVHLSPNSAIA
CHHHHHHHHHHHHHHHEEHHHHHCHHHHHCCHHEEECCCEEECCEEEECCEEECCCCCCC
GSTQLGECAWLGIGAVTRQLVSVGAGATIGAGATVIGNVAANTVVMGTPAKIQITRDLGA
CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHEEECHHCCEEEECCCCEEEEECCCCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]