| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678530
Identifier: 37678530
GI number: 37678530
Start: 354394
End: 354813
Strand: Direct
Name: 37678530
Synonym: VV0346
Alternate gene names: NA
Gene position: 354394-354813 (Clockwise)
Preceding gene: 37678529
Following gene: 37678531
Centisome position: 10.56
GC content: 30.71
Gene sequence:
>420_bases ATGATTTTAATTTTATCATTAGTAAATTTAATAGCTTCGAATAATATAAATTTTTATGGTTTAATTCCTATGGATGAATA TAAAAGTCTTTTGGAACAATCTGAAATTGCATTTAGTCTGCGTGACCCTGCAGACATGGAGCATGACTTTAATTTTCCTT CCAAAATTCTGGAGTATCTTGCCGCTGGTAAGTTCGTTATTTCAAGTAAGATGTACTCGTTCATCCCTGAAGGTATTTTG TTTTATTGTGATTTCAACACTGATTCTTTAGTGAAAGCTGTGAAGAAGGTGCAAAGTCTTAGCATTGAAGAGCAAGAAGC TTATAAAATAAGAGTTTATAAATTTATTATGGATAACTTTACTGAAAGTCGATTGATAGATTGCTTGAATAGGTTGGAAA ATGATCAACAGGTTTTTTAA
Upstream 100 bases:
>100_bases CTTGGAAAAACTACAGGCTTTGAGCTTTGCCTAGAGGCTTTTTCTAAATTGCCTGACATTAGACTTAATATTACAGGAAA ACCATATCATTATTCTGAGA
Downstream 100 bases:
>100_bases GCTTTTAGGTATTGTTTTGCAACGTTTATTACCTAGATTGTTATTTCCTAAATTGAATAGTTATAGTTATAACCTTCAAG GGTACAAAGTTAGTAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MILILSLVNLIASNNINFYGLIPMDEYKSLLEQSEIAFSLRDPADMEHDFNFPSKILEYLAAGKFVISSKMYSFIPEGIL FYCDFNTDSLVKAVKKVQSLSIEEQEAYKIRVYKFIMDNFTESRLIDCLNRLENDQQVF
Sequences:
>Translated_139_residues MILILSLVNLIASNNINFYGLIPMDEYKSLLEQSEIAFSLRDPADMEHDFNFPSKILEYLAAGKFVISSKMYSFIPEGIL FYCDFNTDSLVKAVKKVQSLSIEEQEAYKIRVYKFIMDNFTESRLIDCLNRLENDQQVF >Mature_139_residues MILILSLVNLIASNNINFYGLIPMDEYKSLLEQSEIAFSLRDPADMEHDFNFPSKILEYLAAGKFVISSKMYSFIPEGIL FYCDFNTDSLVKAVKKVQSLSIEEQEAYKIRVYKFIMDNFTESRLIDCLNRLENDQQVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16161; Mature: 16161
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILILSLVNLIASNNINFYGLIPMDEYKSLLEQSEIAFSLRDPADMEHDFNFPSKILEYL CCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHH AAGKFVISSKMYSFIPEGILFYCDFNTDSLVKAVKKVQSLSIEEQEAYKIRVYKFIMDNF HHCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC TESRLIDCLNRLENDQQVF CHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MILILSLVNLIASNNINFYGLIPMDEYKSLLEQSEIAFSLRDPADMEHDFNFPSKILEYL CCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHH AAGKFVISSKMYSFIPEGILFYCDFNTDSLVKAVKKVQSLSIEEQEAYKIRVYKFIMDNF HHCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC TESRLIDCLNRLENDQQVF CHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA