| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37678531
Identifier: 37678531
GI number: 37678531
Start: 355295
End: 356344
Strand: Direct
Name: 37678531
Synonym: VV0347
Alternate gene names: NA
Gene position: 355295-356344 (Clockwise)
Preceding gene: 37678530
Following gene: 37678532
Centisome position: 10.59
GC content: 34.1
Gene sequence:
>1050_bases ATGAAAGTAATGAGAAAGGTTTTATTTTTGTACTCTGAAATAGGGCCTTATAATATCCCTGTTTTTGAAGAGCTTTCTAA GACATTTAATTGTGATATACATGTGGTTAGATGGGATAAAAACTGCCTAAAGCCATACTCACCAAAGCGAATAGATCATG TAACGTATTACAAAAGGTCGAAATTCGACGAAAATAAGCTTAAAGATTTAATTGAGTTTATCAACCCCGAGATTATTTAT GTATCAGGCTGGATGGATAATCTATATCTCAAAATAGTTGAGCCAATAAAGCCTAAAGGTATACCTATTGTCATAGGATT TGATGATATTTGGACCGGATCTTTAAGGCAGGTTCTTGGCCAATATTATTTCAGGGTGAGGTTAAATAAATATTTTAGTC ATGCATGGGTTGCTGGTGAAGCTCAGTATGAGTTTGCAAGGCGTTTGGGTTTCTCAAGAGAAAATATTATTTTTGACTTG TTATCTGCTGATATAAAAAACTTTTCGTCAGTTAAATACAATGAAAACGCCAATTTTTTTCTGTATGTTGGTAACTTTAG AAAAGTTAAAGGTACTGATTTACTTGCAAAATCTTTTAAATTTTATAGAGATGAGTTAAACGGTAATTTCAAATTATTGT GTATTGGTAATGGAGAATTAATATCAGCCTTATCTGATAACTCTAATATCATTGTGCAGGGATATACTGAACAAAGCGAA TTGATCAAGGCTATAGGTCAAGCATCAGCATTTATTTTACCATCGCGTCATGACCAATGGGGGGTTGTTGCACATGAATT TGCAACGGCAGGTTTACCTCTAATAATGTCTACCGGAGTTGGGGCTAGAAGTAAATTTTTGATCAATGGTTATAATGGTT TTGTTTTTGAAAATGGTTCTTCTTTAGATTTGGCGCATAAAATGAAAGCTTTTGAAAGTATTTCATCAGAGGAAAAGTCT AATATGTCCAAGCGTTCTAGAGAACTTGGCACGCGCATTTCACCTCAGTCAAGTGCTGCTAGTTTTATGTCTCTATTGGG GTATAAATGA
Upstream 100 bases:
>100_bases TGGTTGCATTGTAGCAGCAGGTTCAGTAGTTACAAAAAGTTTTCCTCCTAATACTCTCATCGCAGGCAATCCTGCTACTT CAAAGAAGGTATTGAGTTAA
Downstream 100 bases:
>100_bases ATAAGTTATTAATAAACTTTTTTAGTGCTAAATCTGGTGGCGGTAAAGTCATTTTAGATAATTTCATGGAGCATTTTGAT GCTGATGATGTCGAGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKVMRKVLFLYSEIGPYNIPVFEELSKTFNCDIHVVRWDKNCLKPYSPKRIDHVTYYKRSKFDENKLKDLIEFINPEIIY VSGWMDNLYLKIVEPIKPKGIPIVIGFDDIWTGSLRQVLGQYYFRVRLNKYFSHAWVAGEAQYEFARRLGFSRENIIFDL LSADIKNFSSVKYNENANFFLYVGNFRKVKGTDLLAKSFKFYRDELNGNFKLLCIGNGELISALSDNSNIIVQGYTEQSE LIKAIGQASAFILPSRHDQWGVVAHEFATAGLPLIMSTGVGARSKFLINGYNGFVFENGSSLDLAHKMKAFESISSEEKS NMSKRSRELGTRISPQSSAASFMSLLGYK
Sequences:
>Translated_349_residues MKVMRKVLFLYSEIGPYNIPVFEELSKTFNCDIHVVRWDKNCLKPYSPKRIDHVTYYKRSKFDENKLKDLIEFINPEIIY VSGWMDNLYLKIVEPIKPKGIPIVIGFDDIWTGSLRQVLGQYYFRVRLNKYFSHAWVAGEAQYEFARRLGFSRENIIFDL LSADIKNFSSVKYNENANFFLYVGNFRKVKGTDLLAKSFKFYRDELNGNFKLLCIGNGELISALSDNSNIIVQGYTEQSE LIKAIGQASAFILPSRHDQWGVVAHEFATAGLPLIMSTGVGARSKFLINGYNGFVFENGSSLDLAHKMKAFESISSEEKS NMSKRSRELGTRISPQSSAASFMSLLGYK >Mature_349_residues MKVMRKVLFLYSEIGPYNIPVFEELSKTFNCDIHVVRWDKNCLKPYSPKRIDHVTYYKRSKFDENKLKDLIEFINPEIIY VSGWMDNLYLKIVEPIKPKGIPIVIGFDDIWTGSLRQVLGQYYFRVRLNKYFSHAWVAGEAQYEFARRLGFSRENIIFDL LSADIKNFSSVKYNENANFFLYVGNFRKVKGTDLLAKSFKFYRDELNGNFKLLCIGNGELISALSDNSNIIVQGYTEQSE LIKAIGQASAFILPSRHDQWGVVAHEFATAGLPLIMSTGVGARSKFLINGYNGFVFENGSSLDLAHKMKAFESISSEEKS NMSKRSRELGTRISPQSSAASFMSLLGYK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 39913; Mature: 39913
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMRKVLFLYSEIGPYNIPVFEELSKTFNCDIHVVRWDKNCLKPYSPKRIDHVTYYKRS CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHC KFDENKLKDLIEFINPEIIYVSGWMDNLYLKIVEPIKPKGIPIVIGFDDIWTGSLRQVLG CCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH QYYFRVRLNKYFSHAWVAGEAQYEFARRLGFSRENIIFDLLSADIKNFSSVKYNENANFF HHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCEE LYVGNFRKVKGTDLLAKSFKFYRDELNGNFKLLCIGNGELISALSDNSNIIVQGYTEQSE EEECCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHH LIKAIGQASAFILPSRHDQWGVVAHEFATAGLPLIMSTGVGARSKFLINGYNGFVFENGS HHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCEEEECCC SLDLAHKMKAFESISSEEKSNMSKRSRELGTRISPQSSAASFMSLLGYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKVMRKVLFLYSEIGPYNIPVFEELSKTFNCDIHVVRWDKNCLKPYSPKRIDHVTYYKRS CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHC KFDENKLKDLIEFINPEIIYVSGWMDNLYLKIVEPIKPKGIPIVIGFDDIWTGSLRQVLG CCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH QYYFRVRLNKYFSHAWVAGEAQYEFARRLGFSRENIIFDLLSADIKNFSSVKYNENANFF HHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCEE LYVGNFRKVKGTDLLAKSFKFYRDELNGNFKLLCIGNGELISALSDNSNIIVQGYTEQSE EEECCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHH LIKAIGQASAFILPSRHDQWGVVAHEFATAGLPLIMSTGVGARSKFLINGYNGFVFENGS HHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCEEEECCC SLDLAHKMKAFESISSEEKSNMSKRSRELGTRISPQSSAASFMSLLGYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]