| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is wzb [C]
Identifier: 37678523
GI number: 37678523
Start: 345845
End: 346285
Strand: Direct
Name: wzb [C]
Synonym: VV0339
Alternate gene names: 37678523
Gene position: 345845-346285 (Clockwise)
Preceding gene: 37678522
Following gene: 37678524
Centisome position: 10.31
GC content: 45.58
Gene sequence:
>441_bases ATGTTTAACAAAATCTTAGTCGTTTGTGTCGGTAACATTTGCCGCTCTCCAACTGGTGAGCGTGTGCTACAAAAACTACT TCCGAATAAAACCGTTGCTTCTGCCGGTATTGCAGCAGAGAAAAGCCGTTTAATTGGTAAGCCAGCCGATGCAATGGCGA TAGAAGTGGCAAAAGAGAATGGTGTTGATGTAGAAAACCATCAATCACAGCAACTTACCTCTGCGCTGTGTAGCCAATAT GATCTGATCCTCGTAATGGAAAAAGGCCATATGGAAGCACTAACACAAATCGCTCCTGAAGCGCGCGGAAAAACCATGCT ATTCGGCCAATGGATTGGACAAAAAGATATCCCCGATCCGTATCGCCAAAGCAAAGAAGCCTTCGCGCACGCTTATCAGT TAATTGACGAAGCCGCACAAGCCTGGGCAAAGAAATTGTAG
Upstream 100 bases:
>100_bases GGACTAGGAAGAGCAAAAACCTAGAAAACTTCTCTTCCCTAGAATACTAGCTACCTTCTTTACCTAGCAACCTTCTCTTC CCTAGCAACCTGAGGAAAAC
Downstream 100 bases:
>100_bases AAGAGCAGGGACGAGGAAGAAAGAGCAGGAGCGAGGTTACTAGGAACTAGGAAAAGACTAGTAACTAAGAAAGAACAGGG ACGAGATTACTAGGGACTAG
Product: cytoplasmic phosphatase
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MFNKILVVCVGNICRSPTGERVLQKLLPNKTVASAGIAAEKSRLIGKPADAMAIEVAKENGVDVENHQSQQLTSALCSQY DLILVMEKGHMEALTQIAPEARGKTMLFGQWIGQKDIPDPYRQSKEAFAHAYQLIDEAAQAWAKKL
Sequences:
>Translated_146_residues MFNKILVVCVGNICRSPTGERVLQKLLPNKTVASAGIAAEKSRLIGKPADAMAIEVAKENGVDVENHQSQQLTSALCSQY DLILVMEKGHMEALTQIAPEARGKTMLFGQWIGQKDIPDPYRQSKEAFAHAYQLIDEAAQAWAKKL >Mature_146_residues MFNKILVVCVGNICRSPTGERVLQKLLPNKTVASAGIAAEKSRLIGKPADAMAIEVAKENGVDVENHQSQQLTSALCSQY DLILVMEKGHMEALTQIAPEARGKTMLFGQWIGQKDIPDPYRQSKEAFAHAYQLIDEAAQAWAKKL
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI4757714, Length=149, Percent_Identity=29.5302013422819, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI6005988, Length=149, Percent_Identity=27.5167785234899, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1788375, Length=146, Percent_Identity=54.7945205479452, Blast_Score=171, Evalue=2e-44, Organism=Escherichia coli, GI87081812, Length=145, Percent_Identity=55.8620689655172, Blast_Score=164, Evalue=3e-42, Organism=Drosophila melanogaster, GI78706766, Length=152, Percent_Identity=31.5789473684211, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI78706768, Length=152, Percent_Identity=31.5789473684211, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 16036; Mature: 16036
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKILVVCVGNICRSPTGERVLQKLLPNKTVASAGIAAEKSRLIGKPADAMAIEVAKEN CCCHHHHEEHHHHHCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHCCCCCHHHHEEECCCC GVDVENHQSQQLTSALCSQYDLILVMEKGHMEALTQIAPEARGKTMLFGQWIGQKDIPDP CCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCH YRQSKEAFAHAYQLIDEAAQAWAKKL HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFNKILVVCVGNICRSPTGERVLQKLLPNKTVASAGIAAEKSRLIGKPADAMAIEVAKEN CCCHHHHEEHHHHHCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHCCCCCHHHHEEECCCC GVDVENHQSQQLTSALCSQYDLILVMEKGHMEALTQIAPEARGKTMLFGQWIGQKDIPDP CCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCH YRQSKEAFAHAYQLIDEAAQAWAKKL HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]