| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is wzc [H]
Identifier: 37678524
GI number: 37678524
Start: 346520
End: 348700
Strand: Direct
Name: wzc [H]
Synonym: VV0340
Alternate gene names: 37678524
Gene position: 346520-348700 (Clockwise)
Preceding gene: 37678523
Following gene: 37678525
Centisome position: 10.33
GC content: 45.07
Gene sequence:
>2181_bases ATGAACGAGACAATGACAACACCACAAAACCGATCTTCCGTTGATAACTCGTCTGACGAAATCGATTTAGGCAAGCTGCT TGGCATTCTTTTGGATGCAAAATGGATCATCCTAGTAACAACCTTTTTATTTGCGGTTGGTGGAGTCGCGGTTGCGCTAC TTTCAACGCCTATCTACAAAGCCGATGCGCTGATTCAAATTGAGCAAAAAAGCTCGGGCGGCATTAGCTCGCTGGTTGGG GATATGGGGGAGTTATTCTCACAAGAATCTTCTGCTACAACGGAAATCGAAATCATCAAGTCACGAATGATTTTGGGCGA TACGGTGGATAAGTTCAATTTGACCACAGTAGCAGAGCCAAAATACTTGCCTGTGATTGGTAAGGGATTGGCTCGCATCG CTGGAAAGGTGAATCAAATCGAAATCAGCCGTTATACAGTGCCAGAATACGCTCAAGAGATGAAGCATACCTTAGTGGTG CTGGATGCGGAGAAGAAAACGTATCAATTGGTACGTGGTGATGAGCAAGTGGTGCTGCAAGGTGCTGCAGGAGAGCTAGC AAAAAAAGATGGCTACGAGCTGTTTGTTACGGAATTACGTTCCCACAATGAACAAGAGTTTTCTCTATCGCAACAGAGCC GCCTAGAGGCGATTGAGTGGCTGAAAAAGAACTTAGCGATCAGTGAGCGTGGTAAGCAAACGGGCATTTTAATGCTGAGC TTCGAAGGTGAAAACCGTAAGCAAATCAGTGAAATTCTCAACCATATTAGCCAAACTTACTTTTTGCAAAATGTAGAGCG CAATTCGGCAGAAGCGGAAAAAAGCTTGACCTTCTTAAAAGGCCATTTACCAGACATCAAAAACAGCCTTACAACGGCAG AAGATACACTGAATCGATTCCGTCAAGACAACGAATCGATCGACTTAGGCTTAGAAGCCAAATCAACTCTGGATGTGATG GTAAAACTGGAAGCACAACTCAACGAGCTGACCTTCAAAGAAAGCGAAATCAGCCAACGTTTTACCAAAGATCACCCGGC ATACCGTTCTCTACTCGATAAGCGAGAAACGCTGCTTAAAGAGCGTGAGCGTTTAAATCAGCAAGTGCAAAAACTGCCAA AGACGCAACGTGAAGTGCTGCGCATGACGCGTGATGTAGAAGTTAACCAACAGATCTACATTCAATTACTGAACAAAGTA CAAGAACTCAGCATTATCAAAGCAGGTACCGTAGGTAACGTGCGTATCCTCGATGAAGCGCAAAGTTACGCAAAACCTGT TAAACCTAAGAAGCCATTGATTGTAGTGCTCGCGACTCTGTTAGGTGGCATGCTCAGTGTGGCCTTGGTATTGGTTAAAG CGGCGTTTCATCGGGGTGTAGAAAATCCAGATGAGATTGAACAGATTGGCCTTTCTGTGTATGCAAGTGTGCCAAAATCC AATCTACAGTTAGAGCTGGCCAATAAGCTTGCTCGCAAGAAGCGCAATACAGATTTGACGCTACTGGCGGAGAGTAACCC TGCCGACCTATCTATTGAAGCATTGCGTGGCCTGCGTACCAGCTTACACTTTGCGATGATGGAAGCAAAAAACAACGTAT TGATGATCTCAGGCCCTGCACCTGGCATTGGTAAATCGTTTGTTTCTACCAACTTTGCAGCGGTAGCAGCAAAAACAGGA CAAAAAGTATTGCTGATTGATGCAGATATGCGCAAAGGCTATTTGCAACAGTGTTTTGGTTTAAATTGGGAAAATGGCCT ATCGGATTTGCTCAGTGGGAAAGTAACAAGAGACGTCGCAGTGCAATCTGCCAAAGTAGAGAACTTAGACATCATCACCC GTGGTCAAGTGCCACCAAACCCTTCAGAGCTGCTCATGCATCCGCGCTTTAAAGAGCTTGTAGATTGGGCAAGTGAAAAC TACGACTTAGTCATTGTAGATACTCCACCTGTGCTCGCGGTAACCGACCCAAGCATAGTAGGTGCAATAGCGGGCACCAC ATTAATGGTGGCTCGCTTTGGCCAAAACACAGTGAAAGAGATTGATGTGGCACGTAGCCGCTTTGAGCAAGCAGGCATCG AAGTAAAAGGTGTGATTCTAAACGCGATAGAGAAAAAAGCCTCTTCATCTTATGGCTACGGTTATTACAACTATAGCTAT GGTGAGAGTAATAAAGCTTAA
Upstream 100 bases:
>100_bases GTACCCTTCTCTTCCCTAGCAACCTGCTCTTCCCTAGAATCCTAGCAATCTTCTCTTCCCTAGAACCTTATTTTAAAATC ATAAATCCACCAACCCGGAA
Downstream 100 bases:
>100_bases ATTAACCGGGGAGAACTGCTATTCGGCTGTTATCTCCTCGGTATCTCCAGAATTTTGTATCTAAATTATTGTTGGTTAGT TGTATGTCAAAGAAGAAAGT
Product: putative tyrosine-protein kinase Wzc
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MNETMTTPQNRSSVDNSSDEIDLGKLLGILLDAKWIILVTTFLFAVGGVAVALLSTPIYKADALIQIEQKSSGGISSLVG DMGELFSQESSATTEIEIIKSRMILGDTVDKFNLTTVAEPKYLPVIGKGLARIAGKVNQIEISRYTVPEYAQEMKHTLVV LDAEKKTYQLVRGDEQVVLQGAAGELAKKDGYELFVTELRSHNEQEFSLSQQSRLEAIEWLKKNLAISERGKQTGILMLS FEGENRKQISEILNHISQTYFLQNVERNSAEAEKSLTFLKGHLPDIKNSLTTAEDTLNRFRQDNESIDLGLEAKSTLDVM VKLEAQLNELTFKESEISQRFTKDHPAYRSLLDKRETLLKERERLNQQVQKLPKTQREVLRMTRDVEVNQQIYIQLLNKV QELSIIKAGTVGNVRILDEAQSYAKPVKPKKPLIVVLATLLGGMLSVALVLVKAAFHRGVENPDEIEQIGLSVYASVPKS NLQLELANKLARKKRNTDLTLLAESNPADLSIEALRGLRTSLHFAMMEAKNNVLMISGPAPGIGKSFVSTNFAAVAAKTG QKVLLIDADMRKGYLQQCFGLNWENGLSDLLSGKVTRDVAVQSAKVENLDIITRGQVPPNPSELLMHPRFKELVDWASEN YDLVIVDTPPVLAVTDPSIVGAIAGTTLMVARFGQNTVKEIDVARSRFEQAGIEVKGVILNAIEKKASSSYGYGYYNYSY GESNKA
Sequences:
>Translated_726_residues MNETMTTPQNRSSVDNSSDEIDLGKLLGILLDAKWIILVTTFLFAVGGVAVALLSTPIYKADALIQIEQKSSGGISSLVG DMGELFSQESSATTEIEIIKSRMILGDTVDKFNLTTVAEPKYLPVIGKGLARIAGKVNQIEISRYTVPEYAQEMKHTLVV LDAEKKTYQLVRGDEQVVLQGAAGELAKKDGYELFVTELRSHNEQEFSLSQQSRLEAIEWLKKNLAISERGKQTGILMLS FEGENRKQISEILNHISQTYFLQNVERNSAEAEKSLTFLKGHLPDIKNSLTTAEDTLNRFRQDNESIDLGLEAKSTLDVM VKLEAQLNELTFKESEISQRFTKDHPAYRSLLDKRETLLKERERLNQQVQKLPKTQREVLRMTRDVEVNQQIYIQLLNKV QELSIIKAGTVGNVRILDEAQSYAKPVKPKKPLIVVLATLLGGMLSVALVLVKAAFHRGVENPDEIEQIGLSVYASVPKS NLQLELANKLARKKRNTDLTLLAESNPADLSIEALRGLRTSLHFAMMEAKNNVLMISGPAPGIGKSFVSTNFAAVAAKTG QKVLLIDADMRKGYLQQCFGLNWENGLSDLLSGKVTRDVAVQSAKVENLDIITRGQVPPNPSELLMHPRFKELVDWASEN YDLVIVDTPPVLAVTDPSIVGAIAGTTLMVARFGQNTVKEIDVARSRFEQAGIEVKGVILNAIEKKASSSYGYGYYNYSY GESNKA >Mature_726_residues MNETMTTPQNRSSVDNSSDEIDLGKLLGILLDAKWIILVTTFLFAVGGVAVALLSTPIYKADALIQIEQKSSGGISSLVG DMGELFSQESSATTEIEIIKSRMILGDTVDKFNLTTVAEPKYLPVIGKGLARIAGKVNQIEISRYTVPEYAQEMKHTLVV LDAEKKTYQLVRGDEQVVLQGAAGELAKKDGYELFVTELRSHNEQEFSLSQQSRLEAIEWLKKNLAISERGKQTGILMLS FEGENRKQISEILNHISQTYFLQNVERNSAEAEKSLTFLKGHLPDIKNSLTTAEDTLNRFRQDNESIDLGLEAKSTLDVM VKLEAQLNELTFKESEISQRFTKDHPAYRSLLDKRETLLKERERLNQQVQKLPKTQREVLRMTRDVEVNQQIYIQLLNKV QELSIIKAGTVGNVRILDEAQSYAKPVKPKKPLIVVLATLLGGMLSVALVLVKAAFHRGVENPDEIEQIGLSVYASVPKS NLQLELANKLARKKRNTDLTLLAESNPADLSIEALRGLRTSLHFAMMEAKNNVLMISGPAPGIGKSFVSTNFAAVAAKTG QKVLLIDADMRKGYLQQCFGLNWENGLSDLLSGKVTRDVAVQSAKVENLDIITRGQVPPNPSELLMHPRFKELVDWASEN YDLVIVDTPPVLAVTDPSIVGAIAGTTLMVARFGQNTVKEIDVARSRFEQAGIEVKGVILNAIEKKASSSYGYGYYNYSY GESNKA
Specific function: Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium. Phosphorylates udg [H]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=712, Percent_Identity=49.5786516853933, Blast_Score=688, Evalue=0.0, Organism=Escherichia coli, GI1787216, Length=718, Percent_Identity=46.5181058495822, Blast_Score=640, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 80402; Mature: 80402
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETMTTPQNRSSVDNSSDEIDLGKLLGILLDAKWIILVTTFLFAVGGVAVALLSTPIYK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ADALIQIEQKSSGGISSLVGDMGELFSQESSATTEIEIIKSRMILGDTVDKFNLTTVAEP CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC KYLPVIGKGLARIAGKVNQIEISRYTVPEYAQEMKHTLVVLDAEKKTYQLVRGDEQVVLQ CCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEECCHHHHHHHCCCCEEEEE GAAGELAKKDGYELFVTELRSHNEQEFSLSQQSRLEAIEWLKKNLAISERGKQTGILMLS CCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEE FEGENRKQISEILNHISQTYFLQNVERNSAEAEKSLTFLKGHLPDIKNSLTTAEDTLNRF ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RQDNESIDLGLEAKSTLDVMVKLEAQLNELTFKESEISQRFTKDHPAYRSLLDKRETLLK HCCCCCEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ERERLNQQVQKLPKTQREVLRMTRDVEVNQQIYIQLLNKVQELSIIKAGTVGNVRILDEA HHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEHHHH QSYAKPVKPKKPLIVVLATLLGGMLSVALVLVKAAFHRGVENPDEIEQIGLSVYASVPKS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCC NLQLELANKLARKKRNTDLTLLAESNPADLSIEALRGLRTSLHFAMMEAKNNVLMISGPA CCCHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCC PGIGKSFVSTNFAAVAAKTGQKVLLIDADMRKGYLQQCFGLNWENGLSDLLSGKVTRDVA CCCCHHHHHCCHHHEEECCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH VQSAKVENLDIITRGQVPPNPSELLMHPRFKELVDWASENYDLVIVDTPPVLAVTDPSIV HHHCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCEEEECCCHHH GAIAGTTLMVARFGQNTVKEIDVARSRFEQAGIEVKGVILNAIEKKASSSYGYGYYNYSY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEECC GESNKA CCCCCC >Mature Secondary Structure MNETMTTPQNRSSVDNSSDEIDLGKLLGILLDAKWIILVTTFLFAVGGVAVALLSTPIYK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ADALIQIEQKSSGGISSLVGDMGELFSQESSATTEIEIIKSRMILGDTVDKFNLTTVAEP CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCC KYLPVIGKGLARIAGKVNQIEISRYTVPEYAQEMKHTLVVLDAEKKTYQLVRGDEQVVLQ CCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEECCHHHHHHHCCCCEEEEE GAAGELAKKDGYELFVTELRSHNEQEFSLSQQSRLEAIEWLKKNLAISERGKQTGILMLS CCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEE FEGENRKQISEILNHISQTYFLQNVERNSAEAEKSLTFLKGHLPDIKNSLTTAEDTLNRF ECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RQDNESIDLGLEAKSTLDVMVKLEAQLNELTFKESEISQRFTKDHPAYRSLLDKRETLLK HCCCCCEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH ERERLNQQVQKLPKTQREVLRMTRDVEVNQQIYIQLLNKVQELSIIKAGTVGNVRILDEA HHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEHHHH QSYAKPVKPKKPLIVVLATLLGGMLSVALVLVKAAFHRGVENPDEIEQIGLSVYASVPKS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCC NLQLELANKLARKKRNTDLTLLAESNPADLSIEALRGLRTSLHFAMMEAKNNVLMISGPA CCCHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCC PGIGKSFVSTNFAAVAAKTGQKVLLIDADMRKGYLQQCFGLNWENGLSDLLSGKVTRDVA CCCCHHHHHCCHHHEEECCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH VQSAKVENLDIITRGQVPPNPSELLMHPRFKELVDWASENYDLVIVDTPPVLAVTDPSIV HHHCCCCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCEEEECCCHHH GAIAGTTLMVARFGQNTVKEIDVARSRFEQAGIEVKGVILNAIEKKASSSYGYGYYNYSY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEECC GESNKA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]