Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678448

Identifier: 37678448

GI number: 37678448

Start: 274559

End: 274756

Strand: Direct

Name: 37678448

Synonym: VV0264

Alternate gene names: NA

Gene position: 274559-274756 (Clockwise)

Preceding gene: 37678447

Following gene: 37678449

Centisome position: 8.18

GC content: 43.94

Gene sequence:

>198_bases
GTGAATTCAGACCGCTGGTTATCTGTTGAAGAAATAGCCGAATATCTTGGCGTAAGCAAAGATACTGTGTACTCATGGAT
CAGTAAAAAGGGTATGCCAGCTCATAGAATTGGTCGGCCTTGGAAGTTTAAAGCAGATGAGGTGGATCAGTGGGTTAGAT
CTGGTGGCGCATCAGATGACAGCAAGGAAGAAAAATAG

Upstream 100 bases:

>100_bases
TTTTAAATCCTCTCTATTCAGCTTAAATCAAGTTTACTTTGCTAAGCGAATATGTGACTATTTTACAAAAGCCTCAAGCT
CATAACGTTAGGTACCTTTT

Downstream 100 bases:

>100_bases
TATGGCCTTAAACGAAGCAGATACTTGCCGGGTCTATGTGACGCCAAAGCTCAAAGAGTCTGGATGGGAAAACAATCCTA
GCGCAATAACTGAACAGTAC

Product: VrlI homologue

Products: NA

Alternate protein names: Transcriptional Regulator; Prophage Regulatory Protein; Cytoplasmic Protein; Conserved Domain Protein; VrlI Protein; VrlI Like Protein

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNSDRWLSVEEIAEYLGVSKDTVYSWISKKGMPAHRIGRPWKFKADEVDQWVRSGGASDDSKEEK

Sequences:

>Translated_65_residues
MNSDRWLSVEEIAEYLGVSKDTVYSWISKKGMPAHRIGRPWKFKADEVDQWVRSGGASDDSKEEK
>Mature_65_residues
MNSDRWLSVEEIAEYLGVSKDTVYSWISKKGMPAHRIGRPWKFKADEVDQWVRSGGASDDSKEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7488; Mature: 7488

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDRWLSVEEIAEYLGVSKDTVYSWISKKGMPAHRIGRPWKFKADEVDQWVRSGGASDD
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCC
SKEEK
CCCCC
>Mature Secondary Structure
MNSDRWLSVEEIAEYLGVSKDTVYSWISKKGMPAHRIGRPWKFKADEVDQWVRSGGASDD
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCC
SKEEK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA