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The map label for this gene is 37678447

Identifier: 37678447

GI number: 37678447

Start: 272561

End: 274309

Strand: Direct

Name: 37678447

Synonym: VV0263

Alternate gene names: NA

Gene position: 272561-274309 (Clockwise)

Preceding gene: 37678446

Following gene: 37678448

Centisome position: 8.13

GC content: 53.57

Gene sequence:

>1749_bases
GTGCTGCTTATGGCCGTGGATAAACCATCAGCATCAAACCAATTACCTGTCGGTGATATGCATAGCAACATGCCATCATT
ACCAGCTGGTTTTGCCTATAACGCGCAAAACTGGCTGGTGATGCAACCGGCAGGGCAAGATAGCCCAGTCAAAATCTGCT
CTTGGTTGCAAGTGGCCGCCCGCACCCGCGATCCACAAGGGGACAACTACGGCTATTTATTGCACTGGTTAGACGATGAC
AATCGCCATCGCTATTGGGCCATGCCAGCAGAACTATTGGCCGGAGATGGCAGCGAGTACCGTCGGATATTACTCAGCCG
AGGCATGCGGCTGAGTAACAGTGTCAAAGCGCGGCAGTTGCTCTCGCTGTTTATTCAACAAATGGGCGAACTGGCCACGC
AAAAAGCCATTAGCGTGAACTGCATTGGCTGGCATCACCACGCTTATGTGCATCCGCGCCTCACCTTTTACCCAAGCGAA
CACAACAACCCGCGCATGGTGCTGCAAACCATGCACCCGATAGAAGGCTTTATTCAACAAGGTAGTAGCGATAGTTGGCG
GCAGCACGTTGGCTGTTATTGTCTGGATAACCCGCTATTGATTGTTGGTGTCTGCGCTGCACTGGCTGCGCCTTTGTTGC
AATTGTGTGGGGTGGATGGATTTGGTTTACACCTCTACGGTGCCAGCAGTACTGGCAAAACCGCGGCGCTGTATCCGGCG
TTATCAGTGTGGGGCGAACCTAATCAACTGCGCCACAGTTGGCGAGCCACGGCCAACGGTTTAGAAGGCACAGCATTAGC
GCATAACGATGCCTTGCTGGCGCTCGATGAAATGGGCGAAGTTGACCCAAAAGAGGCAGGCGATGTCGCTTATATGCTTG
CCAATGGCCAAGGTAAAACCCGTGCAGGCAAATACGGTGAAATGCGCTTACCCGCCCGTTGGCGTTTAGTGTTTTTATCT
ACTGGTGAAGTGACGCTCGAAAGCCATCTTGCCAGTATCGGAAAGCGCGTAAAAGCCGGCCAGCAAGTGCGCGTGATTGA
TCTCAGTGCCGATGCCGGAGCGCAAATGGGCGTGTTTAACCATAGTCATGGTATTAACGCCGCCGATTTAGCCGATCATC
TTAAACAGCAAAGTCGCCAACATTACGGCTGCTTGGCCTTGGACTGGTTACGGTATTTAACGCAGCACAGCGCGCAGGTG
CGACCCGTTTTCCAAAACGTACGCCAACGTTTTTTAGCTAGCTTACCAACCGAGGCTGACGGCCAAGTGCGCCGGGTCGC
CGAAAAGTTTGCTTTACTGGCTAGTGCTGGGTTGTTAGCCATTCAAGCCAAAGTACTCGATTGGCCAACCCAAAGTGTCG
AGGCGGCCTGTTTAAGCCAGCTTAACCAATGGATACTCGCCCGTGGTGGTGTGGCCGCCAATGAAGACCAACAAGCCATT
CGCCAGGTGCGCAGCTTTATTGAGCAGCATGGCGAAAGCCGCTTTACGCCCAAACAAACCGGTTACAGCAGCCAAGTACG
CCAACGCGCAGGTTGGCTTGATACTACTGGCCCACAAACCCTTTACCTGTTTTACCCAACTGGCTGGCGTGAAGCCACCG
AAGGCCTAAGCCCAGATCGCGCCGCCAAAGCACTGATGGCCGCAGGCTACCTAGTCCCTGATGGCAACCGACCACAGCGC
AAAGTCAGCCTGCCCGATAACACCCGCCCACGAATGTACTGTGTTAAAGGCAGTATTTTGGATGACTAA

Upstream 100 bases:

>100_bases
ATGGCCAGCGGTGAATTTCCACGTTCCATTCGTATTGGTGCGCGTGCCGTGGGCTGGTTAGAAAGCGATATCGACCAGTG
GATTGAAACCCGCCGTATCG

Downstream 100 bases:

>100_bases
AATGGCGATGAATCCTGTGTAGGCTTGTCGCCTTGCAGTGCACCGCCAGTTAACACAAGGGCTGGACGAGGTATAAAGTC
TGAGGCGGACAATACCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Inner Membrane; Primase C 2 Family; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MLLMAVDKPSASNQLPVGDMHSNMPSLPAGFAYNAQNWLVMQPAGQDSPVKICSWLQVAARTRDPQGDNYGYLLHWLDDD
NRHRYWAMPAELLAGDGSEYRRILLSRGMRLSNSVKARQLLSLFIQQMGELATQKAISVNCIGWHHHAYVHPRLTFYPSE
HNNPRMVLQTMHPIEGFIQQGSSDSWRQHVGCYCLDNPLLIVGVCAALAAPLLQLCGVDGFGLHLYGASSTGKTAALYPA
LSVWGEPNQLRHSWRATANGLEGTALAHNDALLALDEMGEVDPKEAGDVAYMLANGQGKTRAGKYGEMRLPARWRLVFLS
TGEVTLESHLASIGKRVKAGQQVRVIDLSADAGAQMGVFNHSHGINAADLADHLKQQSRQHYGCLALDWLRYLTQHSAQV
RPVFQNVRQRFLASLPTEADGQVRRVAEKFALLASAGLLAIQAKVLDWPTQSVEAACLSQLNQWILARGGVAANEDQQAI
RQVRSFIEQHGESRFTPKQTGYSSQVRQRAGWLDTTGPQTLYLFYPTGWREATEGLSPDRAAKALMAAGYLVPDGNRPQR
KVSLPDNTRPRMYCVKGSILDD

Sequences:

>Translated_582_residues
MLLMAVDKPSASNQLPVGDMHSNMPSLPAGFAYNAQNWLVMQPAGQDSPVKICSWLQVAARTRDPQGDNYGYLLHWLDDD
NRHRYWAMPAELLAGDGSEYRRILLSRGMRLSNSVKARQLLSLFIQQMGELATQKAISVNCIGWHHHAYVHPRLTFYPSE
HNNPRMVLQTMHPIEGFIQQGSSDSWRQHVGCYCLDNPLLIVGVCAALAAPLLQLCGVDGFGLHLYGASSTGKTAALYPA
LSVWGEPNQLRHSWRATANGLEGTALAHNDALLALDEMGEVDPKEAGDVAYMLANGQGKTRAGKYGEMRLPARWRLVFLS
TGEVTLESHLASIGKRVKAGQQVRVIDLSADAGAQMGVFNHSHGINAADLADHLKQQSRQHYGCLALDWLRYLTQHSAQV
RPVFQNVRQRFLASLPTEADGQVRRVAEKFALLASAGLLAIQAKVLDWPTQSVEAACLSQLNQWILARGGVAANEDQQAI
RQVRSFIEQHGESRFTPKQTGYSSQVRQRAGWLDTTGPQTLYLFYPTGWREATEGLSPDRAAKALMAAGYLVPDGNRPQR
KVSLPDNTRPRMYCVKGSILDD
>Mature_582_residues
MLLMAVDKPSASNQLPVGDMHSNMPSLPAGFAYNAQNWLVMQPAGQDSPVKICSWLQVAARTRDPQGDNYGYLLHWLDDD
NRHRYWAMPAELLAGDGSEYRRILLSRGMRLSNSVKARQLLSLFIQQMGELATQKAISVNCIGWHHHAYVHPRLTFYPSE
HNNPRMVLQTMHPIEGFIQQGSSDSWRQHVGCYCLDNPLLIVGVCAALAAPLLQLCGVDGFGLHLYGASSTGKTAALYPA
LSVWGEPNQLRHSWRATANGLEGTALAHNDALLALDEMGEVDPKEAGDVAYMLANGQGKTRAGKYGEMRLPARWRLVFLS
TGEVTLESHLASIGKRVKAGQQVRVIDLSADAGAQMGVFNHSHGINAADLADHLKQQSRQHYGCLALDWLRYLTQHSAQV
RPVFQNVRQRFLASLPTEADGQVRRVAEKFALLASAGLLAIQAKVLDWPTQSVEAACLSQLNQWILARGGVAANEDQQAI
RQVRSFIEQHGESRFTPKQTGYSSQVRQRAGWLDTTGPQTLYLFYPTGWREATEGLSPDRAAKALMAAGYLVPDGNRPQR
KVSLPDNTRPRMYCVKGSILDD

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64291; Mature: 64291

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLMAVDKPSASNQLPVGDMHSNMPSLPAGFAYNAQNWLVMQPAGQDSPVKICSWLQVAA
CEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHH
RTRDPQGDNYGYLLHWLDDDNRHRYWAMPAELLAGDGSEYRRILLSRGMRLSNSVKARQL
HCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH
LSLFIQQMGELATQKAISVNCIGWHHHAYVHPRLTFYPSEHNNPRMVLQTMHPIEGFIQQ
HHHHHHHHHHHHHHHCEEEEEEEEECEEEECCEEEECCCCCCCCEEEEEHHHHHHHHHHC
GSSDSWRQHVGCYCLDNPLLIVGVCAALAAPLLQLCGVDGFGLHLYGASSTGKTAALYPA
CCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECHH
LSVWGEPNQLRHSWRATANGLEGTALAHNDALLALDEMGEVDPKEAGDVAYMLANGQGKT
HHHCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEHHCCCCCCCCCCCEEEEEECCCCCC
RAGKYGEMRLPARWRLVFLSTGEVTLESHLASIGKRVKAGQQVRVIDLSADAGAQMGVFN
CCCCCCCEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEE
HSHGINAADLADHLKQQSRQHYGCLALDWLRYLTQHSAQVRPVFQNVRQRFLASLPTEAD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
GQVRRVAEKFALLASAGLLAIQAKVLDWPTQSVEAACLSQLNQWILARGGVAANEDQQAI
HHHHHHHHHHHHHHHCCHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RQVRSFIEQHGESRFTPKQTGYSSQVRQRAGWLDTTGPQTLYLFYPTGWREATEGLSPDR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCHHH
AAKALMAAGYLVPDGNRPQRKVSLPDNTRPRMYCVKGSILDD
HHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLLMAVDKPSASNQLPVGDMHSNMPSLPAGFAYNAQNWLVMQPAGQDSPVKICSWLQVAA
CEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHH
RTRDPQGDNYGYLLHWLDDDNRHRYWAMPAELLAGDGSEYRRILLSRGMRLSNSVKARQL
HCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH
LSLFIQQMGELATQKAISVNCIGWHHHAYVHPRLTFYPSEHNNPRMVLQTMHPIEGFIQQ
HHHHHHHHHHHHHHHCEEEEEEEEECEEEECCEEEECCCCCCCCEEEEEHHHHHHHHHHC
GSSDSWRQHVGCYCLDNPLLIVGVCAALAAPLLQLCGVDGFGLHLYGASSTGKTAALYPA
CCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECHH
LSVWGEPNQLRHSWRATANGLEGTALAHNDALLALDEMGEVDPKEAGDVAYMLANGQGKT
HHHCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEHHCCCCCCCCCCCEEEEEECCCCCC
RAGKYGEMRLPARWRLVFLSTGEVTLESHLASIGKRVKAGQQVRVIDLSADAGAQMGVFN
CCCCCCCEECCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEE
HSHGINAADLADHLKQQSRQHYGCLALDWLRYLTQHSAQVRPVFQNVRQRFLASLPTEAD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
GQVRRVAEKFALLASAGLLAIQAKVLDWPTQSVEAACLSQLNQWILARGGVAANEDQQAI
HHHHHHHHHHHHHHHCCHHEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RQVRSFIEQHGESRFTPKQTGYSSQVRQRAGWLDTTGPQTLYLFYPTGWREATEGLSPDR
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCHHH
AAKALMAAGYLVPDGNRPQRKVSLPDNTRPRMYCVKGSILDD
HHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA