| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678349
Identifier: 37678349
GI number: 37678349
Start: 171773
End: 172972
Strand: Direct
Name: 37678349
Synonym: VV0165
Alternate gene names: NA
Gene position: 171773-172972 (Clockwise)
Preceding gene: 37678348
Following gene: 37678350
Centisome position: 5.12
GC content: 33.5
Gene sequence:
>1200_bases GTGTCTTTTTATCCTTTAGTTCAGTTACGCAGAGCAGCATCTCAGCATAGCTTTAATCGGCCTGTGTTTAGTTGCTCTGT TCATGTTACTGAGGGTATAGCTGAAATTCTTGAGCAATGTGAATACCTGCGTGAGATAAATGGTAGTGATATTGATGGAA ATTTAGTCAATTTTAATGATTATATAGACCAAGAAATTGAGTTAACTTTTCGAACGCCTAGAACTAATGAATCTCAATTT TACCAAAACTTAAATGCTTTTCTTGATAACTTGACATTTTCTTATTCTGAAGATGTTGAATTGCCTGAATTTTATTTATT CGATGAAGATTTATATTATTCAACTAACTCAATAGAATCTGATTACGATGATATTTTTAGCCGGCTGAAATTACTAATTA GAAGTGTAGCTAAACTTGAAAACTTAGCTCATTATCATGATGAAAAAATGGGTGATTCTCGGACTTTAGTTTATCTCTCA GGTGAACATCGAACACCTATAGTTTTAAGTGTAAGTATTTCTGAAAATTTACTATCGAAAGACATTAATTTCTCTCTTTT GAATGAGTTGACTTCAGCCGAATCCGAATTGAATATGCACTACAGTGATAAACTGAGTGTTTTTTATGCTTCATTGCATG AATTTTTAGGTGGAGGTTATGCCCCAGATGAAGCCTTTAACAAATTGATTGATTCTTGGGGAGCATTCGTTGCTTTATAT CAGAATAATCTGTCTACTTACTTAAGTGGTTTTTCGTTTCATAAGGCTAAAAAAGAAGTTGCTGAAGCTGAAATTGAGCT ATCTGAAAAATTAACTAATCTGACTAGTGACATTGTTTTTAAGCTTTTTTCCGTCCCAGCCTCTGTTATGGCATTAGCCG CAATTATGCAAAAGGGTCAGTTAGACGCACTAGTTTTTGTCCTGCTAGTAATCGGAGTTATTGTTACGATTCTGCTTATG TACGGATTGCTTAAAAGTCAAAAGAATAAGTATGAATCATTGGAGAAAGCTAAAGATCTTGTATTTAGCTCTATTGATGG AAAAGAAGCTGAGTACCCAGATGAGTTAAATACTGAAATTATAGCAATGAAGAGTCGCTTAAACAAACATTTTAAGTCGA CAGATAAATGGCTTGGTTACTATAAGGTCGCCATATTTTCTCCACTGATAGCACTTATATTATTTATAATCATCGCTTAA
Upstream 100 bases:
>100_bases CAGTGCAAGGGTTTACTTCGATGGAGCTAAAGTTATAATCAAGGATCTTCCACAAGATCTGATTGATAAACTAAATCAGC AAATTAATGGGTAGCAACCA
Downstream 100 bases:
>100_bases GAGTTATGAGTGGTACTAATTCCCGATTTCTAATTTTATCTCCAATTGCCCCCTGAATAGTTACTATTAATAAATTTCAT AAACAACTTTATTTAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSFYPLVQLRRAASQHSFNRPVFSCSVHVTEGIAEILEQCEYLREINGSDIDGNLVNFNDYIDQEIELTFRTPRTNESQF YQNLNAFLDNLTFSYSEDVELPEFYLFDEDLYYSTNSIESDYDDIFSRLKLLIRSVAKLENLAHYHDEKMGDSRTLVYLS GEHRTPIVLSVSISENLLSKDINFSLLNELTSAESELNMHYSDKLSVFYASLHEFLGGGYAPDEAFNKLIDSWGAFVALY QNNLSTYLSGFSFHKAKKEVAEAEIELSEKLTNLTSDIVFKLFSVPASVMALAAIMQKGQLDALVFVLLVIGVIVTILLM YGLLKSQKNKYESLEKAKDLVFSSIDGKEAEYPDELNTEIIAMKSRLNKHFKSTDKWLGYYKVAIFSPLIALILFIIIA
Sequences:
>Translated_399_residues MSFYPLVQLRRAASQHSFNRPVFSCSVHVTEGIAEILEQCEYLREINGSDIDGNLVNFNDYIDQEIELTFRTPRTNESQF YQNLNAFLDNLTFSYSEDVELPEFYLFDEDLYYSTNSIESDYDDIFSRLKLLIRSVAKLENLAHYHDEKMGDSRTLVYLS GEHRTPIVLSVSISENLLSKDINFSLLNELTSAESELNMHYSDKLSVFYASLHEFLGGGYAPDEAFNKLIDSWGAFVALY QNNLSTYLSGFSFHKAKKEVAEAEIELSEKLTNLTSDIVFKLFSVPASVMALAAIMQKGQLDALVFVLLVIGVIVTILLM YGLLKSQKNKYESLEKAKDLVFSSIDGKEAEYPDELNTEIIAMKSRLNKHFKSTDKWLGYYKVAIFSPLIALILFIIIA >Mature_398_residues SFYPLVQLRRAASQHSFNRPVFSCSVHVTEGIAEILEQCEYLREINGSDIDGNLVNFNDYIDQEIELTFRTPRTNESQFY QNLNAFLDNLTFSYSEDVELPEFYLFDEDLYYSTNSIESDYDDIFSRLKLLIRSVAKLENLAHYHDEKMGDSRTLVYLSG EHRTPIVLSVSISENLLSKDINFSLLNELTSAESELNMHYSDKLSVFYASLHEFLGGGYAPDEAFNKLIDSWGAFVALYQ NNLSTYLSGFSFHKAKKEVAEAEIELSEKLTNLTSDIVFKLFSVPASVMALAAIMQKGQLDALVFVLLVIGVIVTILLMY GLLKSQKNKYESLEKAKDLVFSSIDGKEAEYPDELNTEIIAMKSRLNKHFKSTDKWLGYYKVAIFSPLIALILFIIIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45445; Mature: 45314
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYPLVQLRRAASQHSFNRPVFSCSVHVTEGIAEILEQCEYLREINGSDIDGNLVNFND CCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHH YIDQEIELTFRTPRTNESQFYQNLNAFLDNLTFSYSEDVELPEFYLFDEDLYYSTNSIES HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCCCCC DYDDIFSRLKLLIRSVAKLENLAHYHDEKMGDSRTLVYLSGEHRTPIVLSVSISENLLSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHHHHC DINFSLLNELTSAESELNMHYSDKLSVFYASLHEFLGGGYAPDEAFNKLIDSWGAFVALY CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QNNLSTYLSGFSFHKAKKEVAEAEIELSEKLTNLTSDIVFKLFSVPASVMALAAIMQKGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC LDALVFVLLVIGVIVTILLMYGLLKSQKNKYESLEKAKDLVFSSIDGKEAEYPDELNTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHH IAMKSRLNKHFKSTDKWLGYYKVAIFSPLIALILFIIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFYPLVQLRRAASQHSFNRPVFSCSVHVTEGIAEILEQCEYLREINGSDIDGNLVNFND CCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHH YIDQEIELTFRTPRTNESQFYQNLNAFLDNLTFSYSEDVELPEFYLFDEDLYYSTNSIES HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCCCCC DYDDIFSRLKLLIRSVAKLENLAHYHDEKMGDSRTLVYLSGEHRTPIVLSVSISENLLSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHHHHC DINFSLLNELTSAESELNMHYSDKLSVFYASLHEFLGGGYAPDEAFNKLIDSWGAFVALY CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QNNLSTYLSGFSFHKAKKEVAEAEIELSEKLTNLTSDIVFKLFSVPASVMALAAIMQKGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC LDALVFVLLVIGVIVTILLMYGLLKSQKNKYESLEKAKDLVFSSIDGKEAEYPDELNTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHH IAMKSRLNKHFKSTDKWLGYYKVAIFSPLIALILFIIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA