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The map label for this gene is ndpA [C]

Identifier: 37678348

GI number: 37678348

Start: 170672

End: 171766

Strand: Direct

Name: ndpA [C]

Synonym: VV0164

Alternate gene names: 37678348

Gene position: 170672-171766 (Clockwise)

Preceding gene: 37678347

Following gene: 37678349

Centisome position: 5.09

GC content: 38.63

Gene sequence:

>1095_bases
ATGGCAATCACTATTCATCGAGCTGTTGTGCATGAATTGATAAAAGAAAAAAATGAAGAACCTCAACCATTGCATTACCG
ACAATCCCTTCTACCTGTAGATAATGAGAGTGTACAGAATGTAATTGCTGGCGTTGTTAATATTTATGGAAGAAAGAATA
ACAGTGCCAGATATGGGGTTTTTCGGGACGATGAGGCCTCTGGAAGTGTACCCGATTCATTTTATGAATACTCAGAACTA
GAAGATGTTAGTGATGAAGACTTCATGGTTCTATCAAAGTCAGTCATGCAGGAGTTATTTCGAGAAGCTACCGGGGTTGC
ATTCGCTACTGGTGGACATATCTTATTTTCGGATTATGAGAGTGATGGAGTTAGATTCTATTTAGCTGCGATGATCAAGC
AAAAGTCAGGATTCGCATTCTCCGATACACTCGGTGTGGAAGATCTTGAATACATTGATTTAAGTAAGCTTCATCAAGCA
ATTAAAATTAATTTTTCTAAATACAACGCCTATCAAAACACTGATGATATTGAACGTCAGGACTCTACGTATTTAAGTTT
TGTTAGTCCACAAACAAGTCAGTCAGCAGCTGGATATTTCATTCAGGCGATGGGATGTAAAGCTGGTGCACCTTCAGCAA
AAGCAACTCAAGCGGCTGTTGATGAAAGTGTTGGTTTTTTCGAGTCTAAAGAAGATTTGAAAGCGCATGCTCCAAACTTA
AAAAGAGCGTTGACCGTTTATCTGGAACAAAAAGCTGAATCTAATGAACCAGCAACTTTACCTGATATCGAAGGAATCGC
CCGACGTTTTTTTCCTACCGATGATGAAGAGCAGGCTGATAGATATGCTGATGAGTTTGTTACATATTTAAACCGCGAAG
AAAGTGGTGTTCCACCTGAGTTCCCTGTTAATAAGACAAAACTCAAAACAATGACTCATTTAGTCTACAAAGGTGACGAT
TTACACCTAGAATTTGATAAGGAAGATATAGGTGGTAATCCCAGTGCAAGGGTTTACTTCGATGGAGCTAAAGTTATAAT
CAAGGATCTTCCACAAGATCTGATTGATAAACTAAATCAGCAAATTAATGGGTAG

Upstream 100 bases:

>100_bases
TGTAAAGTGCAAAAAATGTAAGCGGGTCTCATTTACTCTCTCGTGTGGCTTTTATATAGTAAGACGATTGCATATTTATA
ATTATCTTCAAGGACTTTAC

Downstream 100 bases:

>100_bases
CAACCAGTGTCTTTTTATCCTTTAGTTCAGTTACGCAGAGCAGCATCTCAGCATAGCTTTAATCGGCCTGTGTTTAGTTG
CTCTGTTCATGTTACTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGVFRDDEASGSVPDSFYEYSEL
EDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYESDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQA
IKINFSKYNAYQNTDDIERQDSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL
KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPEFPVNKTKLKTMTHLVYKGDD
LHLEFDKEDIGGNPSARVYFDGAKVIIKDLPQDLIDKLNQQING

Sequences:

>Translated_364_residues
MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGVFRDDEASGSVPDSFYEYSEL
EDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYESDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQA
IKINFSKYNAYQNTDDIERQDSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL
KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPEFPVNKTKLKTMTHLVYKGDD
LHLEFDKEDIGGNPSARVYFDGAKVIIKDLPQDLIDKLNQQING
>Mature_363_residues
AITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGVFRDDEASGSVPDSFYEYSELE
DVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYESDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAI
KINFSKYNAYQNTDDIERQDSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNLK
RALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPEFPVNKTKLKTMTHLVYKGDDL
HLEFDKEDIGGNPSARVYFDGAKVIIKDLPQDLIDKLNQQING

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=367, Percent_Identity=22.8882833787466, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 40798; Mature: 40666

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGV
CEEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECE
FRDDEASGSVPDSFYEYSELEDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYE
EECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCC
SDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAIKINFSKYNAYQNTDDIERQ
CCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHCHHHHHHHHEECHHHHCCCCCCCHHHHC
DSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL
CCCEEEEECCCCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCH
KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPE
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FPVNKTKLKTMTHLVYKGDDLHLEFDKEDIGGNPSARVYFDGAKVIIKDLPQDLIDKLNQ
CCCCHHHHHHHHHHEECCCCEEEEECHHHCCCCCCEEEEECCHHHHHHHCCHHHHHHHHH
QING
HHCC
>Mature Secondary Structure 
AITIHRAVVHELIKEKNEEPQPLHYRQSLLPVDNESVQNVIAGVVNIYGRKNNSARYGV
EEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECE
FRDDEASGSVPDSFYEYSELEDVSDEDFMVLSKSVMQELFREATGVAFATGGHILFSDYE
EECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCC
SDGVRFYLAAMIKQKSGFAFSDTLGVEDLEYIDLSKLHQAIKINFSKYNAYQNTDDIERQ
CCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHCHHHHHHHHEECHHHHCCCCCCCHHHHC
DSTYLSFVSPQTSQSAAGYFIQAMGCKAGAPSAKATQAAVDESVGFFESKEDLKAHAPNL
CCCEEEEECCCCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCH
KRALTVYLEQKAESNEPATLPDIEGIARRFFPTDDEEQADRYADEFVTYLNREESGVPPE
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FPVNKTKLKTMTHLVYKGDDLHLEFDKEDIGGNPSARVYFDGAKVIIKDLPQDLIDKLNQ
CCCCHHHHHHHHHHEECCCCEEEEECHHHCCCCCCEEEEECCHHHHHHHCCHHHHHHHHH
QING
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA