Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678336

Identifier: 37678336

GI number: 37678336

Start: 159838

End: 160227

Strand: Direct

Name: 37678336

Synonym: VV0152

Alternate gene names: NA

Gene position: 159838-160227 (Clockwise)

Preceding gene: 37678333

Following gene: 37678337

Centisome position: 4.76

GC content: 40.51

Gene sequence:

>390_bases
GTGACAGAAACGTATGACACGATAAACAGTGAGAGCATCGTTCGCTTCTTCTGGAAGCTCAAAAAGGAACATTACCCGTT
GGAGCAAAAAGTACACCTAGTACTTGATGGTGCCGCCTATCATCAGTCAGAAATGGTAAGAAATGCGGCAAAAGTGCTCA
ATATCGAGCTTCATTACTTACCGCCATACAGCCCAAACTTAAATCCAATAGAGCGGTTATGGAAAGTGATGAATGAGTAT
GTGAGGAACAATATTTACTTCTCCTCGAAGGCTGAATTTACAACGGCTATTAATGAATTTTTCAATGTAACTCTGCCAAA
AGTTGCAGGCTCACTGGTATCCAGAATTACGGATAATTTTCAGATTTTGAGACCTGCATCTTCAAGTTGA

Upstream 100 bases:

>100_bases
AGGGAAATGAACTTACTTAACCGATCAGATCGTAGCCTTCTGATTTAGTTCCCTCGAATTACGCAACAAAGCCTTACCAC
TTCAAAATATTGGCGCAACC

Downstream 100 bases:

>100_bases
GCGGGTATAGTAATCAAAAAAATATTGTAGTATCAGATTACTACCACACTATAAAAAAATCGTTATAAAATAAAATTTTG
GTTAAAAGAGTATATATCAA

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: Transposase Family Protein; Transposase And Inactivated Derivatives; Family Transposase; ISRin1 Transposase OrfB

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTETYDTINSESIVRFFWKLKKEHYPLEQKVHLVLDGAAYHQSEMVRNAAKVLNIELHYLPPYSPNLNPIERLWKVMNEY
VRNNIYFSSKAEFTTAINEFFNVTLPKVAGSLVSRITDNFQILRPASSS

Sequences:

>Translated_129_residues
MTETYDTINSESIVRFFWKLKKEHYPLEQKVHLVLDGAAYHQSEMVRNAAKVLNIELHYLPPYSPNLNPIERLWKVMNEY
VRNNIYFSSKAEFTTAINEFFNVTLPKVAGSLVSRITDNFQILRPASSS
>Mature_128_residues
TETYDTINSESIVRFFWKLKKEHYPLEQKVHLVLDGAAYHQSEMVRNAAKVLNIELHYLPPYSPNLNPIERLWKVMNEYV
RNNIYFSSKAEFTTAINEFFNVTLPKVAGSLVSRITDNFQILRPASSS

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15026; Mature: 14895

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETYDTINSESIVRFFWKLKKEHYPLEQKVHLVLDGAAYHQSEMVRNAAKVLNIELHYL
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHHHHHHHHEEEEEEE
PPYSPNLNPIERLWKVMNEYVRNNIYFSSKAEFTTAINEFFNVTLPKVAGSLVSRITDNF
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
QILRPASSS
EEECCCCCC
>Mature Secondary Structure 
TETYDTINSESIVRFFWKLKKEHYPLEQKVHLVLDGAAYHQSEMVRNAAKVLNIELHYL
CCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHHHHHHHHEEEEEEE
PPYSPNLNPIERLWKVMNEYVRNNIYFSSKAEFTTAINEFFNVTLPKVAGSLVSRITDNF
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
QILRPASSS
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA