| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678323
Identifier: 37678323
GI number: 37678323
Start: 149112
End: 149792
Strand: Direct
Name: 37678323
Synonym: VV0139
Alternate gene names: NA
Gene position: 149112-149792 (Clockwise)
Preceding gene: 37678317
Following gene: 37678324
Centisome position: 4.45
GC content: 39.06
Gene sequence:
>681_bases ATGAAGCTCGATAAAGCGTTGTCAAATATTAGCGAGAAGAATAACTTCATCTACTTAACGTTAGCTTTAATCATGCTGTT AATTGCCGCCGCCCTCGTTCAACTACTACAAGACAATGTGATCGAATACGTCATACAGGGGATTATGGTAGTGATTTTTA TTGTTTGCTTTGTAAGTTTGCGCTTTGATCGAAAGTGGACGCATTTTTTAAGAGGTTTAGCCGTGGTTTGGATAGCTGCT ATTGCCGCGAAACACCTCTTTCATATCAAAGAAATGAGCATATTGATGCTTTCTCTGACTTTTGTCTTTTTCTATGGCAC TTTCCAATCTTTAGTAAGAAAAATCTTGTTTTCAGGCCAAATAGACACCAACAAACTTATTGGTTCTGTAGCCCTATTCT TATTGCTTGGTTTAATGTGGGCGGTGGCTTACCTTTTGTTACTTGAGCTAGACCCTTTCGCATTTCGCGGGTTAGAAGCA ATTCCTTGGGAAGATAATTTTTCTAATAGCGCTTATTTTAGCTTCGTGACCTTAACCACTCTCGGTTATGGGGATATCAG TCCAGTGACTCCAATTGCGAAAACGTTAGTCTATTTAGAGTCGGTTGTTGGTGTTTTTTATATGGCAGTAGTGGTGTCTA GTTTAGTCAGTTCGAATTTAGGTAGAAACACGCCTAGATAA
Upstream 100 bases:
>100_bases GAGAATGTTCGAATAAATGCATATCAAACATGACCATTTTTGATACTGTTGTGGCTAGAGCATACTTGTGCGCCATGATA ACTGTGGAAAGGAGTCAATC
Downstream 100 bases:
>100_bases ATGATATCCCCTTAAGGCGTGGTCAAGTTATCGCTAATGACAATTGCGATATTTACACTGTTTCACAATGTAATAAAGGG CTGTTCCGAACCTTACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Ion Channel; Ion Channel Family Protein; Voltage-Dependent Potassium Channel; Ion Channel Protein; Ion Transport Family Protein; K+ Channel Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKLDKALSNISEKNNFIYLTLALIMLLIAAALVQLLQDNVIEYVIQGIMVVIFIVCFVSLRFDRKWTHFLRGLAVVWIAA IAAKHLFHIKEMSILMLSLTFVFFYGTFQSLVRKILFSGQIDTNKLIGSVALFLLLGLMWAVAYLLLLELDPFAFRGLEA IPWEDNFSNSAYFSFVTLTTLGYGDISPVTPIAKTLVYLESVVGVFYMAVVVSSLVSSNLGRNTPR
Sequences:
>Translated_226_residues MKLDKALSNISEKNNFIYLTLALIMLLIAAALVQLLQDNVIEYVIQGIMVVIFIVCFVSLRFDRKWTHFLRGLAVVWIAA IAAKHLFHIKEMSILMLSLTFVFFYGTFQSLVRKILFSGQIDTNKLIGSVALFLLLGLMWAVAYLLLLELDPFAFRGLEA IPWEDNFSNSAYFSFVTLTTLGYGDISPVTPIAKTLVYLESVVGVFYMAVVVSSLVSSNLGRNTPR >Mature_226_residues MKLDKALSNISEKNNFIYLTLALIMLLIAAALVQLLQDNVIEYVIQGIMVVIFIVCFVSLRFDRKWTHFLRGLAVVWIAA IAAKHLFHIKEMSILMLSLTFVFFYGTFQSLVRKILFSGQIDTNKLIGSVALFLLLGLMWAVAYLLLLELDPFAFRGLEA IPWEDNFSNSAYFSFVTLTTLGYGDISPVTPIAKTLVYLESVVGVFYMAVVVSSLVSSNLGRNTPR
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25377; Mature: 25377
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDKALSNISEKNNFIYLTLALIMLLIAAALVQLLQDNVIEYVIQGIMVVIFIVCFVSL CCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFDRKWTHFLRGLAVVWIAAIAAKHLFHIKEMSILMLSLTFVFFYGTFQSLVRKILFSGQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDTNKLIGSVALFLLLGLMWAVAYLLLLELDPFAFRGLEAIPWEDNFSNSAYFSFVTLTT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH LGYGDISPVTPIAKTLVYLESVVGVFYMAVVVSSLVSSNLGRNTPR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLDKALSNISEKNNFIYLTLALIMLLIAAALVQLLQDNVIEYVIQGIMVVIFIVCFVSL CCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFDRKWTHFLRGLAVVWIAAIAAKHLFHIKEMSILMLSLTFVFFYGTFQSLVRKILFSGQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDTNKLIGSVALFLLLGLMWAVAYLLLLELDPFAFRGLEAIPWEDNFSNSAYFSFVTLTT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH LGYGDISPVTPIAKTLVYLESVVGVFYMAVVVSSLVSSNLGRNTPR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA